BAC Information

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BAC

Clone NameB6Ng01-107E06
Chromosome11 (Build37)
Map Location 91,797,565 - 91,798,770
singlet/doubletsinglet
Overlap genenone
Upstream geneEG664976, Kif2b
Downstream geneLOC382545
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107E06.bB6Ng01-107E06.g
ACCDH914777DH914778
length1,1831,174
definitionDH914777|Mus musculus domesticus DNA, BAC clone: B6Ng01-107E06, 5' end.DH914778|Mus musculus domesticus DNA, BAC clone: B6Ng01-107E06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaattcactaaagcatgatttcagcagggattttgagttttc
gctagcacatatttcctctgtgaaattctgccttccatgggccaaagcaa
acggactggcaagtaatggattagaatacccaaagctcttacttaaaaga
aacctcttctattttgaagagtcttggttattttgttaaagtgatataaa
gatgaccaacacatattttcagataaagctcaagaagctgactgaccatc
aaatatatcataaaataataatagtcaatagagagatgctactgatacac
caagttaaaaaccaagctgtttccagttactggataatctaaatatttta
tgacactttcccagtaactcttgcacagcaagggatgaagaagatactga
gaatacaaagaagctaaaaagttttctctaggatggataagaagcatgta
caaattatttacacctgagaaaagatagaaaattttaatccagatcatag
aaaacaagaatcctctcgacaccttttcagcatcattaacacactatgtt
acatggcaattccaatatttcataatatttagcatctttttattgcatat
attaatatatgtttgaaaaataaaataactacattttcacagtctttcca
cccaaatacttacacatattcatagacataaaggtatatattctaattaa
aaaataagcttcctaatagaatcagacaatttttaatttattgctttgta
gagcagcatgggtttatattcataggcttttcttcacagttgctgaatga
agttcaatgcctatgtgctcaattatatggacatataaattaacttcatc
ctgtgtaagagaaatcaaagaacaaagtaaacacatttcccaggggtgca
cagcagcagctatttcttaccaagttcttaaaaaaaaaaatacggcaggc
ttgtgtgccaacatgatacatatcttcttctaaaaacattcatagaccat
agtctttgaggagtatactcctccctcactcagctacataattctatagt
gtgattttttttagctcatatcatattcatgacatagatgctacatcatc
tcatgtaaaatgactaggaatgcataatgtgaaccataccgacagccttt
ccaatgatatggccctatgtagcaagattgaag
gaattctggggcccaacttaactgagactgctggtcctcctatatggtcg
ccctgctcatcagcttctttcagctcttccctaattcaaccacaggtgtg
agcagcttctgtccattggttgggtgcaaatatctacatctgactctttc
agcaacttgttgggtctttcagagggcagtcaagatagttccctttttgt
aagcactccatagtctcagtaatagtgtaaggccttggggcctcccctct
gagctggatcccactttgtgtctgtcgttggacctccttttcctcaagct
cctctccaattccattcttgcacttctttcttacagaaaaaaattatggg
tcagagttttgactgtgggatggcaaacccatccctcacttaatgccttg
tttttctgctggagatgaattccataagttctctctccccactgtaggcc
atttcatctatggtccctccctttgagtactgacactctttcacttccct
ggtctctggtacattctgaagggtccccccaagctcttacctcctgaggt
tgcctgtttcttcctgttgagcctcagggcttctcctttaccccaaccca
ataccagatcatgttcccttcttcccaccctgtcccttttcttgtctagg
tctctccctccctcttctcttgtgattgctttcttctccctcccaagtgg
gatttgaggcatcctccctcacttgggccctttggcttgttaaccttttt
gagttctgtggactgtacctcatgtattctattcttttttgactaatatc
cacttatttgtgcatacataccatgcatgtccttttggacactcaggatg
atattttctagttccatccatttgtctgcaaaactcaggatgtcctcatt
catcatagctgagtagtagtccatgtataaatgaatcacatttttgtgtt
aattcttctgtcatggagcatctgggttgtttcagcttctggctatcaca
aataggcactgaaaatagtggaacatgtgcctctgtgcctatgggacatc
ttttgcatatattcttagaatggtatgcctgggattcaagtagatctact
tccatttttgagacctcagatgatttccaaatgggttgaccattttgctt
tcactcagatatggagaggtgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_91797565_91798770
seq2: B6Ng01-107E06.b_45_1227 (reverse)

seq1  CTTCTATCTTGGCTACATAGTGGGCATTATCATTTGAAAAAGGCTGTCCT  50
      |||| ||||| ||||||||  ||||  ||||||| |  ||||||||| | 
seq2  CTTCAATCTT-GCTACATA--GGGCCATATCATTGG--AAAGGCTGT-CG  44

seq1  GTATTGTTTCAACATTATGCAATTTCTAGTCATTTTTACATGAAGATGAT  100
      |||| |||   ||||||||| ||| ||||||| ||||||||| |||||||
seq2  GTATGGTT--CACATTATGC-ATTCCTAGTCA-TTTTACATG-AGATGAT  89

seq1  GTTAGCATCTTATTGTCATGAATATGATATTGAGCTAAAAAAAAATCACA  150
      | ||||||||   |||||||||||||||| |||||| |||||||||||||
seq2  G-TAGCATCT--ATGTCATGAATATGATA-TGAGCT-AAAAAAAATCACA  134

seq1  CTATAGAATTATGTTAGCCTGAGTGAGGGAGGGAGGTATACTCCCTCAAA  200
      ||||||||||||| ||| ||||||||||||||   ||||||| |||||||
seq2  CTATAGAATTATG-TAG-CTGAGTGAGGGAGG--AGTATACT-CCTCAAA  179

seq1  GACTATGGTTCTATGAATGTTTTTAGAAGAAGATATGTATTCATGTTGGC  250
      |||||||| |||||||||||||||||||||||||||||| ||||||||||
seq2  GACTATGG-TCTATGAATGTTTTTAGAAGAAGATATGTA-TCATGTTGGC  227

seq1  ACACAAGCCTGCCGTATTTTTTTTTTTAAGAACTTGGTAAGAAATAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACACAAGCCTGCCGTATTTTTTTTTTTAAGAACTTGGTAAGAAATAG-CT  276

seq1  GCTGCTGTGCACCCCTGGG-AATGTGTTTACTTTGTTCTTTGATTTCTCT  349
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GCTGCTGTGCACCCCTGGGAAATGTGTTTACTTTGTTCTTTGATTTCTCT  326

seq1  TACACAGGATGAAGTTAATTTATATGTCCATATAATTGAGCACATAGGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGGATGAAGTTAATTTATATGTCCATATAATTGAGCACATAGGCA  376

seq1  TTGAACTTCATTCAGCAACTGTGAAGAAAAGCCTATGAATATAAACCCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTTCATTCAGCAACTGTGAAGAAAAGCCTATGAATATAAACCCAT  426

seq1  GCTGCTCTACAAAGCAATAAATTAAAAATTGTCTGATTCTATTAGGAAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCTACAAAGCAATAAATTAAAAATTGTCTGATTCTATTAGGAAGC  476

seq1  TTATTTTTTAATTAGAATATATACCTTTATGTCTATGAATATGTGTAAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTAATTAGAATATATACCTTTATGTCTATGAATATGTGTAAGT  526

seq1  ATTTGGGTGGAAAGACTGTGAAAATGTAGTTATTTTATTTTTCAAACATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGTGGAAAGACTGTGAAAATGTAGTTATTTTATTTTTCAAACATA  576

seq1  TATTAATATATGCAATAAAAAGATGCTAAATATTATGAAATATTGGAATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATATATGCAATAAAAAGATGCTAAATATTATGAAATATTGGAATT  626

seq1  GCCATGTAACATAGTGTGTTAATGATGCTGAAAAGGTGTCGAGAGGATTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTAACATAGTGTGTTAATGATGCTGAAAAGGTGTCGAGAGGATTC  676

seq1  TTGTTTTCTATGATCTGGATTAAAATTTTCTATCTTTTCTCAGGTGTAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCTATGATCTGGATTAAAATTTTCTATCTTTTCTCAGGTGTAAA  726

seq1  TAATTTGTACATGCTTCTTATCCATCCTAGAGAAAACTTTTTAGCTTCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGTACATGCTTCTTATCCATCCTAGAGAAAACTTTTTAGCTTCTT  776

seq1  TGTATTCTCAGTATCTTCTTCATCCCTTGCTGTGCAAGAGTTACTGGGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCTCAGTATCTTCTTCATCCCTTGCTGTGCAAGAGTTACTGGGAA  826

seq1  AGTGTCATAAAATATTTAGATTATCCAGTAACTGGAAACAGCTTGGTTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCATAAAATATTTAGATTATCCAGTAACTGGAAACAGCTTGGTTTT  876

seq1  TAACTTGGTGTATCAGTAGCATCTCTCTATTGACTATTATTATTTTATGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGGTGTATCAGTAGCATCTCTCTATTGACTATTATTATTTTATGA  926

seq1  TATATTTGATGGTCAGTCAGCTTCTTGAGCTTTATCTGAAAATATGTGTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGATGGTCAGTCAGCTTCTTGAGCTTTATCTGAAAATATGTGTT  976

seq1  GGTCATCTTTATATCACTTTAACAAAATAACCAAGACTCTTCAAAATAGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATCTTTATATCACTTTAACAAAATAACCAAGACTCTTCAAAATAGA  1026

seq1  AGAGGTTTCTTTTAAGTAAGAGCTTTGGGTATTCTAATCCATTACTTGCC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTTCTTTTAAGTAAGAGCTTTGGGTATTCTAATCCATTACTTGCC  1076

seq1  AGTCCGTTTGCTTTGGCCCATGGAAGGCAGAATTTCACAGAGGAAATATG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCGTTTGCTTTGGCCCATGGAAGGCAGAATTTCACAGAGGAAATATG  1126

seq1  TGCTAGCGAAAACTCAAAATCCCTGCTGAAATCATGCTTTAGTGAATTAA  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCGAAAACTCAAAATCCCTGCTGAAATCATGCTTTAGTGAATTAA  1176

seq1  AGAATTC  1206
      |||||||
seq2  AGAATTC  1183