BAC Information

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BAC

Clone NameB6Ng01-107O23
Chromosome11 (Build37)
Map Location 89,287,336 - 89,406,866
singlet/doubletdoublet
Overlap geneAnkfn1
Upstream geneMsi2, LOC100038945, Akap1, Scpep1, OTTMUSG00000001305, 2210409E12Rik, Coil, LOC100039051, Trim25, Dgke, A930013B10Rik, Gm525, LOC100039114, Nog, LOC100039047, 4932411E22Rik
Downstream genePctp, Tmem100, LOC100039104, Mmd, Hlf, Stxbp4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107O23.bB6Ng01-107O23.g
ACCDH915258DH915259
length1,168532
definitionDH915258|Mus musculus domesticus DNA, BAC clone: B6Ng01-107O23, 5' end.DH915259|Mus musculus domesticus DNA, BAC clone: B6Ng01-107O23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,287,336 - 89,288,506)(89,406,329 - 89,406,866)
sequence
gaattcacagtatctgtccctggagggctgtggaaaaataaacatctatc
tgtgtaaatgctgacaaaacacattattcttgattttagaataattaagg
tagaaaagtctactttataaagaaaattatttagaatagaatttaagtgg
taagtagtaaaaaaaaaagtttgattctttatttccaaaaagtaaaagat
tagcaccaagtggttcatttaattttttaaaaccatttgtagttacacac
tgattccaagagtaaagaaagaacgagtgggcaccgttgtcctttggatt
aacattttagaccccagtgtatggcagctgatggtaattttcaaatttga
cttccccagggtcgtcatgaagaaaaccagtctaacaaaagcattagaag
tttttgaatccctttcctgagaccttgaagatgttgatatgcaaataatg
tccttctgaggatcctgttcatgtcctgttcttccatcatcaactgtcct
gccatgactaggttctccgtggccaatgactatgcataggagttgattga
gtctccttataataagcttcaaacaaatgtcttgccgctaagactgcaat
attgagaaggtgttgttggtacgtcagggtatgccaagttaagcacaagg
ataatatggctgcctgggattttgttccctgtgatcagttctcagtgaat
cccgtgggttattatattcacctctttgtacagctgcagaaactccgcta
actgacaattggcattccccacagcccccgtcccactccctgcattagta
gacacatctactaactatataagccttcagacggtagagttagggggaaa
aaggtgaggagctgaagagtcatgtaactcatgatagaaaaggtctctgt
aggctgcacggaacctgactttcagaaaggagaaaatagctaagagtgaa
tttaaaatgatcaccacaaagagaacagtaaacaagatgacatgatggat
atctattagccgattaattattttacattgcgttattgtatggaaagcat
cactttctgacttcggttatttgattgaaggcacatggtaggaagagatg
aaattatttctagagatcgaatgagagggaacgcgcacttttcaccggac
tgtaagaagacaggactg
taacgacgacggagagggtggcaggcagaacaagaagacttttcaggagt
tcagggactctgattatcacgtcgtcgtaggagctgcagcgagctgggag
gctgccggagaggcgcgcacagagccgttcttggaaagctgtcagggaag
ggtttgtaacctccctaagagaatcgcgcttcttaaaatccccagtctgg
aaaaacctcccgtgaccggtccggatcaacgctgtgtggtagctgcagca
aaaagaacggggaaccacctctgcctgaatctttctgaatgtcgagtgtc
tgggctcctcaagactgggggcaaactccacaagcgggttccccgcgtgt
taggaaggcattacttttttttctgaaaggtcatctggggcttaaaacaa
aatcatcgagaaagagcatgcccatgaacagtctgcacgatttgaaaagg
cctatctgaaaccgaaatagcagcaccctccctacagcccttctctctct
ttgggggattagtagagggggcagggggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_89287336_89288506
seq2: B6Ng01-107O23.b_49_1216

seq1  GAATTCACAGTATCTGTCCCTGGAGGGCTGTGGAAAAATAAACATCTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGTATCTGTCCCTGGAGGGCTGTGGAAAAATAAACATCTATC  50

seq1  TGTGTAAATGCTGACAAAACACATTATTCTTGATTTTAGAATAATTAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAATGCTGACAAAACACATTATTCTTGATTTTAGAATAATTAAGG  100

seq1  TAGAAAAGTCTACTTTATAAAGAAAATTATTTAGAATAGAATTTAAGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGTCTACTTTATAAAGAAAATTATTTAGAATAGAATTTAAGTGG  150

seq1  TAAGTAGTAAAAAAAAAAGTTTGATTCTTTATTTCCAAAAAGTAAAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGTAAAAAAAAAAGTTTGATTCTTTATTTCCAAAAAGTAAAAGAT  200

seq1  TAGCACCAAGTGGTTCATTTAATTTTTTAAAACCATTTGTAGTTACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACCAAGTGGTTCATTTAATTTTTTAAAACCATTTGTAGTTACACAC  250

seq1  TGATTCCAAGAGTAAAGAAAGAACGAGTGGGCACCGTTGTCCTTTGGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCAAGAGTAAAGAAAGAACGAGTGGGCACCGTTGTCCTTTGGATT  300

seq1  AACATTTTAGACCCCAGTGTATGGCAGCTGATGGTAATTTTCAAATTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTAGACCCCAGTGTATGGCAGCTGATGGTAATTTTCAAATTTGA  350

seq1  CTTCCCCAGGGTCGTCATGAAGAAAACCAGTCTAACAAAAGCATTAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCAGGGTCGTCATGAAGAAAACCAGTCTAACAAAAGCATTAGAAG  400

seq1  TTTTTGAATCCCTTTCCTGAGACCTTGAAGATGTTGATATGCAAATAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAATCCCTTTCCTGAGACCTTGAAGATGTTGATATGCAAATAATG  450

seq1  TCCTTCTGAGGATCCTGTTCATGTCCTGTTCTTCCATCATCAACTGTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGAGGATCCTGTTCATGTCCTGTTCTTCCATCATCAACTGTCCT  500

seq1  GCCATGACTAGGTTCTCCGTGGCCAATGACTATGCATAGGAGTTGATTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGACTAGGTTCTCCGTGGCCAATGACTATGCATAGGAGTTGATTGA  550

seq1  GTCTCCTTATAATAAGCTTCAAACAAATGTCTTGCCGCTAAGACTGCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTTATAATAAGCTTCAAACAAATGTCTTGCCGCTAAGACTGCAAT  600

seq1  ATTGAGAAGGTGTTGTTGGTACGTCAGGGTATGCCAAGTTAAGCACAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAAGGTGTTGTTGGTACGTCAGGGTATGCCAAGTTAAGCACAAGG  650

seq1  ATAATATGGCTGCCTGGGATTTTGTTCCCTGTGATCAGTTCTCAGTGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATGGCTGCCTGGGATTTTGTTCCCTGTGATCAGTTCTCAGTGAAT  700

seq1  CCCGTGGGTTATTATATTCACCTCTTTGTACAGCTGCAGAAACTCCGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGGGTTATTATATTCACCTCTTTGTACAGCTGCAGAAACTCCGCTA  750

seq1  ACTGACAATTGGCATTCCCCACAGCCCCCGTCCCACTCCCTGCATTAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACAATTGGCATTCCCCACAGCCCCCGTCCCACTCCCTGCATTAGTA  800

seq1  GACACATCTACTAACTATATAAGCCTTCAGACGGTAGAGTTAGGGGGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATCTACTAACTATATAAGCCTTCAGACGGTAGAGTTAGGGGGAAA  850

seq1  AAGGTGAGGAGCTGAAGAGTCAGGTAACTCATGATAGAAAAGGTCTCTGT  900
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAGGTGAGGAGCTGAAGAGTCATGTAACTCATGATAGAAAAGGTCTCTGT  900

seq1  AGGCTGCACGGAACCTGACTTTCAGAAAGGAGAAAATAGCTAAGAGTGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCACGGAACCTGACTTTCAGAAAGGAGAAAATAGCTAAGAGTGAA  950

seq1  TTTAAAATGAATCACCACAAAAGAGAACAAGTAAACAAGATGACATGATG  1000
      ||||||||| |||||||| ||||||||| |||||||||||||||||||||
seq2  TTTAAAATG-ATCACCAC-AAAGAGAAC-AGTAAACAAGATGACATGATG  997

seq1  GATATTCTAATTAGCCCGATTAATTATTTTACATTGCGTATATGTAT-GA  1049
      |||| ||| ||||| ||||||||||||||||||||||||   ||||| ||
seq2  GATA-TCT-ATTAG-CCGATTAATTATTTTACATTGCGTTATTGTATGGA  1044

seq1  AAGCATCAC-TTCTGAC-TCAGTTATTTGATTGAAAGCA-ATGTTAAGAA  1096
      ||||||||| ||||||| || |||||||||||||| ||| ||| || |||
seq2  AAGCATCACTTTCTGACTTCGGTTATTTGATTGAAGGCACATGGTAGGAA  1094

seq1  -AGATGAAATAAATTCTTAGAAGATTCGAATGA-AGGG-ACCCG-ACTTT  1142
       ||||||||| | ||| ||| ||| |||||||| |||| || || |||||
seq2  GAGATGAAATTATTTC-TAG-AGA-TCGAATGAGAGGGAACGCGCACTTT  1141

seq1  TCCCACTGACTGTAAGGAAGACAGGACTG  1171
      || | | |||||||| |||||||||||||
seq2  TCAC-CGGACTGTAA-GAAGACAGGACTG  1168

seq1: chr11_89406329_89406866
seq2: B6Ng01-107O23.g_65_602 (reverse)

seq1  CCCTCCCCCTGCCCCCTCTACTAATCCCCCAAAGAGAGAGAAGGGCTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCTGCCCCCTCTACTAATCCCCCAAAGAGAGAGAAGGGCTGTA  50

seq1  GGGAGGGTGCTGCTATTTCGGTTTCAGATAGGCCTTTTCAAATCGTGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGTGCTGCTATTTCGGTTTCAGATAGGCCTTTTCAAATCGTGCAG  100

seq1  ACTGTTCATGGGCATGCTCTTTCTCGATGATTTTGTTTTAAGCCCCAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCATGGGCATGCTCTTTCTCGATGATTTTGTTTTAAGCCCCAGAT  150

seq1  GACCTTTCAGAAAAAAAAGTAATGCCTTCCTAACACGCGGGGAACCCGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTCAGAAAAAAAAGTAATGCCTTCCTAACACGCGGGGAACCCGCT  200

seq1  TGTGGAGTTTGCCCCCAGTCTTGAGGAGCCCAGACACTCGACATTCAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGTTTGCCCCCAGTCTTGAGGAGCCCAGACACTCGACATTCAGAA  250

seq1  AGATTCAGGCAGAGGTGGTTCCCCGTTCTTTTTGCTGCAGCTACCACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCAGGCAGAGGTGGTTCCCCGTTCTTTTTGCTGCAGCTACCACACA  300

seq1  GCGTTGATCCGGACCGGTCACGGGAGGTTTTTCCAGACTGGGGATTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTGATCCGGACCGGTCACGGGAGGTTTTTCCAGACTGGGGATTTTAA  350

seq1  GAAGCGCGATTCTCTTAGGGAGGTTACAAACCCTTCCCTGACAGCTTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCGCGATTCTCTTAGGGAGGTTACAAACCCTTCCCTGACAGCTTTCC  400

seq1  AAGAACGGCTCTGTGCGCGCCTCTCCGGCAGCCTCCCAGCTCGCTGCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACGGCTCTGTGCGCGCCTCTCCGGCAGCCTCCCAGCTCGCTGCAGC  450

seq1  TCCTACGACGACGTGATAATCAGAGTCCCTGAACTCCTGAAAAGTCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACGACGACGTGATAATCAGAGTCCCTGAACTCCTGAAAAGTCTTCT  500

seq1  TGTTCTGCCTGCCACCCTCTCCGTCGTCGTTAGAATTC  538
      ||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGCCTGCCACCCTCTCCGTCGTCGTTAGAATTC  538