BAC Information

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BAC

Clone NameB6Ng01-111I07
Chromosome11 (Build37)
Map Location 9,885,931 - 9,886,965
singlet/doubletsinglet
Overlap genenone
Upstream geneHus1, Sunc1, OTTMUSG00000005148, Upp1, LOC626887, LOC100041469, Abca13, LOC665435
Downstream geneLOC382483
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111I07.bB6Ng01-111I07.g
ACCDH917842DH917843
length8451,029
definitionDH917842|Mus musculus domesticus DNA, BAC clone: B6Ng01-111I07, 5' end.DH917843|Mus musculus domesticus DNA, BAC clone: B6Ng01-111I07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagttttactacacagcaatagtgataataactgcatggtattg
gtatagaggcagacaccttaatcaatagaatagaattgaagacccagaaa
taaaacaacacacttatgcacacttgatcatttgataaggaagccaaaaa
tatataatggaaaaatgaaagcaccttcaataaacggtgctggtatgtag
aaaaattaaaatagacccatatttgtcaccttgcacagagctcatgtcca
agtggattatcctgagggaggtaactcaaacccaaaatgacatgcatgat
atgtactcactaataagtggatagtagtccccagtaaagtaaagtaaaga
tatagtccacagaactcaaaattgtgaacaagctgaagggcccaagtgag
gatgcctcagtaccacttgggaaggagaagaaagcaatcacaaggggaaa
agggtacatgggaaggaaagggaatgggaggaagaatggaacctgatctg
gtattgggtgggggaaaaggactgaagccttcagggctggcagaaaggat
ggaaacagacaccctcctgaggtaggcagttggggaaacgagaatgtacc
agagacctgtaaggtgcaagactctcaggactaaaaagggagtgagggac
ttttaggtgaaatgaccttctatagacagagggaacttttagaacacacc
ctccagcagaaagactggggcatctagtgaggggatggagttgcaatccc
acagtcaaaactccgactcgatttgttcctgtctgatttactgcatggat
ggaatgaagaagagcctgaggaaagaaggcccatagtgggatcct

gaattcactttcacttttctaataacagaaagtcagaaaaaccaattact
tctctacccattagaaaactaaactttcctggttacacaacaccgtgata
tcttcagcacttataagtcttcagcacttatactcgagggactaaccatt
agatattacatgagtgaaccaaaacactatccaaaatattttatggagtt
ttgaatggtgaaagtgggctggtataagagaccaatgctcccagtggctg
aagcactaggcatgaacatctcaaccttggttgtctatgttgttgtgggc
ttttggctgttgctgggagacagctttgtgcaagagtgaccttctttacc
actggagcaaaagtccctgtcaggactattgtgtctcccacattatgtat
gaaatatcacaagcaactacttcccaatcttgggacttttcatcttccat
gtgcacacttccttgcctctgaatatgcttatgttctgcttatgttccaa
tagagcaggaaacacatttcagcaatgtttaggcctataaacattagcag
gaaaagaagaggaaaccaactgaagacttttctactgatatctggatgtt
gtgtaaccacgaaagtttagttttctaatggcttgagaagtcattgattt
ttttccaactttttgttattagaaaagggtaattagtttgttacatattg
agctggtactaggtgtctctatgcccatgggggaagggaaggaaagaaat
aaagctattactccatttttaacttatcatggagtcaccagctgtctcag
tcagtgttctgttgctgtgaagagacacaggaccaaaggaaaacatttaa
ttggagacctgcttacagtttccgagcttagcccatatcatggtggcagt
gaccatggtggcatcatggtgctggggtagtaattgagagctacatctga
ttctaaggcagagagagtgaactgggtctccatggaatttgtaacaccaa
atcctacctccagtgatgttctccctcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_9885931_9886965
seq2: B6Ng01-111I07.g_70_1098

seq1  GAATTCACTTTCACTTTTCTAATAACAGAAAGTCAGAAAAACCAATTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTCACTTTTCTAATAACAGAAAGTCAGAAAAACCAATTACT  50

seq1  TCTCTACCCATTAGAAAACTAAACTTTCCTGGTTACACAACACCGTGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACCCATTAGAAAACTAAACTTTCCTGGTTACACAACACCGTGATA  100

seq1  TCTTCAGCACTTATAAGTCTTCAGCACTTATACTCGAGGGACTAACCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGCACTTATAAGTCTTCAGCACTTATACTCGAGGGACTAACCATT  150

seq1  AGATATTACATGAGTGAACCAAAACACTATCCAAAATATTTTATGGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTACATGAGTGAACCAAAACACTATCCAAAATATTTTATGGAGTT  200

seq1  TTGAATGGTGAAAGTGGGCTGGTATAAGAGACCAATGCTCCCAGTGGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGGTGAAAGTGGGCTGGTATAAGAGACCAATGCTCCCAGTGGCTG  250

seq1  AAGCACTAGGCATGAACATCTCAACCTTGGTTGTCTATGTTGTTGTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTAGGCATGAACATCTCAACCTTGGTTGTCTATGTTGTTGTGGGC  300

seq1  TTTTGGCTGTTGCTGGGAGACAGCTTTGTGCAAGAGTGACCTTCTTTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCTGTTGCTGGGAGACAGCTTTGTGCAAGAGTGACCTTCTTTACC  350

seq1  ACTGGAGCAAAAGTCCCTGTCAGGACTATTGTGTCTCCCACATTATGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGCAAAAGTCCCTGTCAGGACTATTGTGTCTCCCACATTATGTAT  400

seq1  GAAATATCACAAGCAACTACTTCCCAATCTTGGGACTTTTCATCTTCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATCACAAGCAACTACTTCCCAATCTTGGGACTTTTCATCTTCCAT  450

seq1  GTGCACACTTCCTTGCCTCTGAATATGCTTATGTTCTGCTTATGTTCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACACTTCCTTGCCTCTGAATATGCTTATGTTCTGCTTATGTTCCAA  500

seq1  TAGAGCAGGAAACACATTTCAGCAATGTTTAGGCCTATAAACATTAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCAGGAAACACATTTCAGCAATGTTTAGGCCTATAAACATTAGCAG  550

seq1  GAAAAGAAGAGGAAACCAACTGAAGACTTTTCTACTGATATCTGGATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAGAGGAAACCAACTGAAGACTTTTCTACTGATATCTGGATGTT  600

seq1  GTGTAACCACGAAAGTTTAGTTTTCTAATGGCTTGAGAAGTCATTGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAACCACGAAAGTTTAGTTTTCTAATGGCTTGAGAAGTCATTGATTT  650

seq1  TTTTCCAACTTTTTGTTATTAGAAAAGGGTAATTAGTTTGTTACATATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAACTTTTTGTTATTAGAAAAGGGTAATTAGTTTGTTACATATTG  700

seq1  AGCTGGTACTAGGTGTCTCTATGCCCATGGGGGAAGGGAAGGAAAGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTACTAGGTGTCTCTATGCCCATGGGGGAAGGGAAGGAAAGAAAT  750

seq1  AAAGCTATTACTCCATTTTTAACTTATCATGGAGTCACCAGCTGTCTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTATTACTCCATTTTTAACTTATCATGGAGTCACCAGCTGTCTCAG  800

seq1  TCAGTGTTCTGTTGCTGTGAAGAGACACAGGACCAAAGGAAAACATTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTTCTGTTGCTGTGAAGAGACACAGGACCAAAGGAAAACATTTAA  850

seq1  TTGGAGACCTGCTTACAGTTTCCGAGGCTTAGCCCATTATCATGGTGGCA  900
      ||||||||||||||||||||||||| |||||||||| |||||||||||||
seq2  TTGGAGACCTGCTTACAGTTTCCGA-GCTTAGCCCA-TATCATGGTGGCA  898

seq1  GTGACCATGGTGGCAATCATGGTGCTGGGGTAGTAATTGAGAGCTACATC  950
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTGACCATGGTGGC-ATCATGGTGCTGGGGTAGTAATTGAGAGCTACATC  947

seq1  TGATTCTAAGGCAGAGAGAGTGGAACTGGGTCTCACATGGGATTTTGTAA  1000
      ||||||||||||||||||||| |||||||||||| ||| ||| |||||||
seq2  TGATTCTAAGGCAGAGAGAGT-GAACTGGGTCTC-CAT-GGAATTTGTAA  994

seq1  CACCAAATCCTACCTCCAGTGATGTTCTCCCTCCA  1035
      |||||||||||||||||||||||||||||||||||
seq2  CACCAAATCCTACCTCCAGTGATGTTCTCCCTCCA  1029


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