BAC Information

Click to search

BAC

Clone NameB6Ng01-113D24
Chromosome11 (Build37)
Map Location 14,715,668 - 14,863,566
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC432535, 1700046C09Rik, 1700054H16Rik, LOC100042542, LOC100041673
Downstream geneLOC432537
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113D24.bB6Ng01-113D24.g
ACCDH919092DH919093
length886994
definitionDH919092|Mus musculus domesticus DNA, BAC clone: B6Ng01-113D24, 5' end.DH919093|Mus musculus domesticus DNA, BAC clone: B6Ng01-113D24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,715,668 - 14,716,553)(14,862,601 - 14,863,566)
sequence
gaattctcccataggtattttgatattaccactttcatgtcatatatgga
atttattcacataattcagttgataattcaaaacaatcttatggatagtg
tattcatatttgtgtattttctccatattgagtaaagtagttgcctttta
tatcttatctgctattgattattccagccacatatttaatattgattaaa
attttatactgtgtatgtatatgtacacatatatatttaacttttccgtt
tttgatattttcatgagtttttctaaaatatcttttatttctttgtgtta
ttataattaactgttgtatacattggctaaaaatatatatataaacatat
atatttttcactggtatagcaactccctttaaccttctcctttgagactt
tctatgagaaaatgttttttaatactaattatatgttctgaaatcaatca
ttctgaattaatttaatgttagtcaatatatcattaggcattgttactgt
ctttatctttaaaaaactgagactggaaataaagtttggtacatttaccg
tatatattagtttgggttttgttgctgtgaatgtccatcataagcaaaag
cactacgtttaattgaggcacacttacaatttcagaggtttaatccatta
ttatcatggtgggatccatggtggcatctatgaagagattgtgctggagg
agccaagagttcttctacactttgatctggatgcagtcagaaggagattg
cctatttcaggctccatgaggaggtactatacatactgtggatagagcct
gagcataggatatctcatggcctgattacacagaaacatattttcccccc
cacgaccacaccacctccaaaaagacaatagttgta
gaattcttgagacatattaatcatggatggcatggtaatgtggtttattc
ttgaataccttggaacagcatgctcattactgccaactatgtctatcaaa
tggcctttgcattaatcttgtttacgcaaagcagaacacattcatctggg
ctaatcatgattcaggatgaagtattaagtgtgaacgagaaacaaaaata
tcacttacatatttaagagtgaaaatatagctgggcacagtggaacacac
ctttaattccaacacttgggaggcaacggcaggcagatttctgagttcga
ggccggcctggtctacaaagtgagttccaggacagccagagctacacaga
gaaaccctgtctcaaaaaaaaaaaaaatatatatatatatatatttatac
acacacactcacacacacacacacacacacacacacacacacatatatat
ataatgtaaatgctaggaaaagatttacctgaagttatgatattatataa
aagttgcacgtaaaatgatctaataataatgtcatagcaaacatataagg
aatggatttttagagatgagatgaggaaaatactgcgaagagattataaa
gaaaaaaccatacgatagctctccatcttaattttgtgtataaatgtaca
aagtgtcctatattctcaatttttacttgaaattataatcctaatactta
agacatttgatgattgtatcatggtaactcaatattaagtgtatttgcat
cttcctgattacaaagaataaggatgaatgtgtgtctctgtgttagagaa
tgtcattttgtgacatgtatattcaaacgagttatgtttttttgcagtcc
taggattgagaaacagggcccttaccacatgttcttcatctgctctatca
tacatgcaaaacattcattgtcagaggacagattaacaactttcatatgc
cttcgctaggtatggaaccctgcaatgaccgaacttggctcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_14715668_14716553
seq2: B6Ng01-113D24.b_45_930

seq1  GAATTCTCCCATAGGTATTTTGATATTACCACTTTCATGTCATATATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCATAGGTATTTTGATATTACCACTTTCATGTCATATATGGA  50

seq1  ATTTATTCACATAATTCAGTTGATAATTCAAAACAATCTTATGGATAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTCACATAATTCAGTTGATAATTCAAAACAATCTTATGGATAGTG  100

seq1  TATTCATATTTGTGTATTTTCTCCATATTGAGTAAAGTAGTTGCCTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATATTTGTGTATTTTCTCCATATTGAGTAAAGTAGTTGCCTTTTA  150

seq1  TATCTTATCTGCTATTGATTATTCCAGCCACATATTTAATATTGATTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTATCTGCTATTGATTATTCCAGCCACATATTTAATATTGATTAAA  200

seq1  ATTTTATACTGTGTATGTATATGTACACATATATATTTAACTTTTCCGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATACTGTGTATGTATATGTACACATATATATTTAACTTTTCCGTT  250

seq1  TTTGATATTTTCATGAGTTTTTCTAAAATATCTTTTATTTCTTTGTGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATATTTTCATGAGTTTTTCTAAAATATCTTTTATTTCTTTGTGTTA  300

seq1  TTATAATTAACTGTTGTATACATTGGCTAAGAATATATATATAAACATAT  350
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTATAATTAACTGTTGTATACATTGGCTAAAAATATATATATAAACATAT  350

seq1  ATATTTTTCACTGTTATAGCAACTCCCTTTAACCTTCTCCTTTGAGACTT  400
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTCACTGGTATAGCAACTCCCTTTAACCTTCTCCTTTGAGACTT  400

seq1  TCTATGAGAAAATGTTTTTTAATACTAATTATATGTTCTGAAATCAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAGAAAATGTTTTTTAATACTAATTATATGTTCTGAAATCAATCA  450

seq1  TTCTGAATTAATTTAATGTTAGTCAATATATCATTAGGCATTGTTACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAATTAATTTAATGTTAGTCAATATATCATTAGGCATTGTTACTGT  500

seq1  CTTTATCTTTAAAAAACTGAGACTGGAAATAAAGTTTGGTACATTTACCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCTTTAAAAAACTGAGACTGGAAATAAAGTTTGGTACATTTACCG  550

seq1  TATATATTAGTTTGGGTTTTGTTGCTGTGAATGTCCATCATAAGCAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTAGTTTGGGTTTTGTTGCTGTGAATGTCCATCATAAGCAAAAG  600

seq1  CACTACGTTTAATTGAGGCACACTTACAATTTCAGAGGTTTAATCCATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACGTTTAATTGAGGCACACTTACAATTTCAGAGGTTTAATCCATTA  650

seq1  TTATCATGGTGGGATCCATGGTGGCATCTAGGAAGAAATTGTGCTGGAGG  700
      |||||||||||||||||||||||||||||| ||||| |||||||||||||
seq2  TTATCATGGTGGGATCCATGGTGGCATCTATGAAGAGATTGTGCTGGAGG  700

seq1  AGCCAAGAGTTCTTCTACACTTTGATCTGGATGCAGTCAGAAGGAGATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGAGTTCTTCTACACTTTGATCTGGATGCAGTCAGAAGGAGATTG  750

seq1  CCTTTTTCAGGCACCATGAGGAGGTTCTAAACATACAATGGATAGAGCCT  800
      ||| |||||||| |||||||||||| ||| ||||||  ||||||||||||
seq2  CCTATTTCAGGCTCCATGAGGAGGTACTATACATACTGTGGATAGAGCCT  800

seq1  GAGCATAGGAGATCTCAAAACCTGATTACACAGTAACATATTTTCCCCAA  850
      |||||||||| ||||||   ||||||||||||| ||||||||||||||  
seq2  GAGCATAGGATATCTCATGGCCTGATTACACAGAAACATATTTTCCCCCC  850

seq1  CAAGACCACACCACCTCCAAAAAGACAATAGTTGTA  886
      || |||||||||||||||||||||||||||||||||
seq2  CACGACCACACCACCTCCAAAAAGACAATAGTTGTA  886

seq1: chr11_14862601_14863566
seq2: B6Ng01-113D24.g_67_1043 (reverse)

seq1  CATTGCA-GGTTCCATACC-AGCG-AGGCATATG-AAGTTG-CAATCTGT  45
      ||||||| ||||||||||| |||| ||||||||| ||||||  |||||||
seq2  CATTGCAGGGTTCCATACCTAGCGAAGGCATATGAAAGTTGTTAATCTGT  50

seq1  -CTCAGACAATGAATG-TTTGCATGTATGATAGAGCAGATGAAGAACATG  93
       ||| ||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCTCTGACAATGAATGTTTTGCATGTATGATAGAGCAGATGAAGAACATG  100

seq1  T-GTAA-GGCCCTG-TTCTCAAATCCTAGGACTGC-AAAAAACATAACTC  139
      | |||| ||||||| ||||| |||||||||||||| ||||||||||||||
seq2  TGGTAAGGGCCCTGTTTCTC-AATCCTAGGACTGCAAAAAAACATAACTC  149

seq1  GTTTGAATATACATGTCACAAAATGACATACTCTAACACAGAGACACACA  189
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTTTGAATATACATGTCACAAAATGACATTCTCTAACACAGAGACACACA  199

seq1  TTCATCCTTATTCTTTGTAATCAGGAAGATGCAAATACAATTAATATTGA  239
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTCATCCTTATTCTTTGTAATCAGGAAGATGCAAATACACTTAATATTGA  249

seq1  GTTACCATGATACAATCATCAAATGTCTTAAGTATTAGGATTATAATTTC  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCATGATACAATCATCAAATGTCTTAAGTATTAGGATTATAATTTC  299

seq1  AAGT-AAAATTGAGAATATAGGACACTTTGTACATTTATACACAAAATTA  338
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAAATTGAGAATATAGGACACTTTGTACATTTATACACAAAATTA  349

seq1  AGATGGAGAGCTATCGTATGGTTTTTTCTTTATAATCTCTTCGCAGTATT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAGAGCTATCGTATGGTTTTTTCTTTATAATCTCTTCGCAGTATT  399

seq1  TTCCTCATCTCATCTCTAAAAATCCATTCCTTATATGTTTGCTATGACAT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCATCTCATCTCTAAAAATCCATTCCTTATATGTTTGCTATGACAT  449

seq1  TATTATTAGATCATTTTATGTGCAACTTTTATATAATATCATAACTTCAG  488
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TATTATTAGATCATTTTACGTGCAACTTTTATATAATATCATAACTTCAG  499

seq1  GTAAATCTTTTCCTAGCATTTACATTATATATATATGTGTGTGTGTGTGT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATCTTTTCCTAGCATTTACATTATATATATATGTGTGTGTGTGTGT  549

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAAATATATATATATATAT  588
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGAGTGTGTGTGTATAAATATATATATATATAT  599

seq1  ATTTTTTTTTTTTTTGAGACAGGGTTTCTCTGTGTAGCTCTGGCTGTCCT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTTTTTTGAGACAGGGTTTCTCTGTGTAGCTCTGGCTGTCCT  649

seq1  GGAACTCACTTTGTAGACCAGGCCGGCCTCGAACTCAGAAATCTGCCTGC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCACTTTGTAGACCAGGCCGGCCTCGAACTCAGAAATCTGCCTGC  699

seq1  CGTTGCCTCCCAAGTGTTGGAATTAAAGGTGTGTTCCACTGTGCCCAGCT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGCCTCCCAAGTGTTGGAATTAAAGGTGTGTTCCACTGTGCCCAGCT  749

seq1  ATATTTTCACTCTTAAATATGTAAGTGATATTTTTGTTTCTCGTTCACAC  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCACTCTTAAATATGTAAGTGATATTTTTGTTTCTCGTTCACAC  799

seq1  TTAATACTTCATCCTGAATCATGATTAGCCCAGATGAATGTGTTCTGCTT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACTTCATCCTGAATCATGATTAGCCCAGATGAATGTGTTCTGCTT  849

seq1  TGCGTAAACAAGATTAATGCAAAGGCCATTTGATAGACATAGTTGGCAGT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTAAACAAGATTAATGCAAAGGCCATTTGATAGACATAGTTGGCAGT  899

seq1  AATGAGCATGCTGTTCCAAGGTATTCAAGAATAAACCACATTACCATGCC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCATGCTGTTCCAAGGTATTCAAGAATAAACCACATTACCATGCC  949

seq1  ATCCATGATTAATATGTCTCAAGAATTC  966
      ||||||||||||||||||||||||||||
seq2  ATCCATGATTAATATGTCTCAAGAATTC  977