BAC Information

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BAC

Clone NameB6Ng01-114H06
Chromosome11 (Build37)
Map Location 26,629,854 - 26,631,049
singlet/doubletsinglet
Overlap genenone
Upstream gene5730522E02Rik, LOC100042328, LOC100042345, Fancl, Vrk2, EG628586, Ppia-ps11_266.1
Downstream geneOTTMUSG00000005300, LOC666270, LOC100042367, LOC100042377
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114H06.bB6Ng01-114H06.g
ACCDH919969DH919970
length1,1761,156
definitionDH919969|Mus musculus domesticus DNA, BAC clone: B6Ng01-114H06, 5' end.DH919970|Mus musculus domesticus DNA, BAC clone: B6Ng01-114H06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtcttctaaatatagtaagaacaactaacagagtaataaaaaa
tataactgtatgtaaaattaatggatttattagttggtttccttggaaaa
catgaatacattaattgtcctcaaatatttaaggtagacaaattataatg
aaaatattgaagtacatgtggagctggcatgtcaacttcatgccaatctc
ttttaatgatagaaataaatacatgccatagaaacattttgctataattg
tgttattactgcctttaaatattttggacttagggacctactaaaatttc
tttttttttttaagcattatatctttttcttttagtagtcataaaaagat
gagctaagtcaacacatttttctgagtatgaaagttatcttcatataccc
agacatacatctgagacatggtgtttgcatctcaatcctctgaggtatta
ctcctactcttaggctataaccaatgtgatttgggttatagcaaattccc
cttactttaatttacatgttttcatggtgcacagtctagtatgtggacac
ttgtaacttgaagcagtggacttgtagctcacacagtggaaactctcccc
atttcctttctgtgctgtgcagttgagcatctcagatatcagtgtacaat
ggcgtgctttcactcttttgttcatctccctcatcttcttcttcatactt
tatcatatttctatttttttagcctagtcatgaaagtaactccatatctt
aaactaactggaagcccctgtgcctttgatcttaactgtagccatatctc
ttagtcacactgattacttcagttatggatttcatgctatttgtgactat
atagcactatcttctaacatttttgaaatatttatgttcttcccagcttt
tcctagagtcttaaatattattgtatattttctaaaagattagaggattc
ttctctttcaatttctgctgttttatacctaaatttacaatgacagagtt
aaattgatctgtattgtagagctggcacaatcagagcatagtaccaagct
gcccaacattcataaggcccttgctacatcatacattagaaggcataaca
tatgtattgcagcaagaagtgctaacttgttctctgtatctcatgagcac
ccaggcaatattgctaagatgccatc
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccttgagat
tccatctcacaccagtcagaatggctaagtacaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagagaaacactcctccattgctggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaagtggacatagtactaccagaggatcctgcaatacctctcctgggc
atatatccagaagacgtgccaactagtaagaaagacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaattaacccaatg
cccctcaacaaaggaatgtatacagaaaatgtggtacaattacacacaat
ggagtactactcagctattaaaaagagtgaatttatgaaattcctatgca
aatggttggacctggagggcattatcctgagtgaggtaacccaatcacaa
aaaaacgcaaatgatatgtactcacttataagtggatattagcccagaaa
cttagaatacccaagatataagttacaatttgcaaaacacatgaaactga
agaagaacaaagaccaaaaggtggacactttgccccttttcagaattgag
aacaaaacacccatggaaggatttacagagaaaaagtttggagctgagac
aaaaggatgaaccatctagagactgccatatccagggatccatcccataa
tcagcctccaaatgctgacaccattgcatacactagcaagattttgctga
aaggaccctgatatagctgtctcttgtgagactatgccggggcctagcaa
acacataagtggatgctcacagccagctattgggtggatcacagggcccc
caatggaggagctagagaaagtacccaaggagctaaagatctgcaccctt
atgggagacatatatgactagcagtacccgagctctgactagctgcatgt
gtatcaaagatgctaatgggcatcactgggaaatgtccatgactgccacc
ttatatgccagttacagggaatgcagccaaagtggagtgtatgggtaggg
gaaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_26629854_26631049
seq2: B6Ng01-114H06.b_46_1221

seq1  GAATTCTGTCTTCTAAATATAGTAAGAACAACTAACAGAGTAATAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCTTCTAAATATAGTAAGAACAACTAACAGAGTAATAAAAAA  50

seq1  TATAACTGTATGTAAAATTAATGGATTTATTAGTTGGTTTCCTTGGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTGTATGTAAAATTAATGGATTTATTAGTTGGTTTCCTTGGAAAA  100

seq1  CATGAATACATTAATTGTCCTCAAATATTTAAGGTAGACAAATTATAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATACATTAATTGTCCTCAAATATTTAAGGTAGACAAATTATAATG  150

seq1  AAAATATTGAAGTACATGTGGAGCTGGCATGTCAACTTCATGCCAATCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTGAAGTACATGTGGAGCTGGCATGTCAACTTCATGCCAATCTC  200

seq1  TTTTAATGATAGAAATAAATACATGCCATAGAAACATTTTGCTATAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATGATAGAAATAAATACATGCCATAGAAACATTTTGCTATAATTG  250

seq1  TGTTATTACTGCCTTTAAATATTTTGGACTTAGGGACCTACTAAAATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTACTGCCTTTAAATATTTTGGACTTAGGGACCTACTAAAATTTC  300

seq1  TTTTTTTTTTTAAGCATTATATCTTTTTCTTTTAGTAGTCATAAAAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTAAGCATTATATCTTTTTCTTTTAGTAGTCATAAAAAGAT  350

seq1  GAGCTAAGTCAACACATTTTTCTGAGTATGAAAGTTATCTTCATATACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAAGTCAACACATTTTTCTGAGTATGAAAGTTATCTTCATATACCC  400

seq1  AGACATACATCTGAGACATGGTGTTTGCATCTCAATCCTCTGAGGTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATACATCTGAGACATGGTGTTTGCATCTCAATCCTCTGAGGTATTA  450

seq1  CTCCTACTCTTAGGCTATAACCAATGTGATTTGGGTTATAGCAAATTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACTCTTAGGCTATAACCAATGTGATTTGGGTTATAGCAAATTCCC  500

seq1  CTTACTTTAATTTACATGTTTTCATGGTGCACAGTCTAGTATGTGGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTTAATTTACATGTTTTCATGGTGCACAGTCTAGTATGTGGACAC  550

seq1  TTGTAACTTGAAGCAGTGGACTTGTAGCTCACACAGTGGAAACTCTCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACTTGAAGCAGTGGACTTGTAGCTCACACAGTGGAAACTCTCCCC  600

seq1  ATTTCCTTTCTGTGCTGTGCAGTTGAGCATCTCAGATATCAGTGTACAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTTCTGTGCTGTGCAGTTGAGCATCTCAGATATCAGTGTACAAT  650

seq1  GGCGTGCTTTCACTCTTTTGTTCATCTCCCTCATCTTCTTCTTCATACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGCTTTCACTCTTTTGTTCATCTCCCTCATCTTCTTCTTCATACTT  700

seq1  TATCATATTTCTATTTTTTTAGCCTAGTCATGAAAGTAACTCCATATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATATTTCTATTTTTTTAGCCTAGTCATGAAAGTAACTCCATATCTT  750

seq1  AAACTAACTGGAAGCCCCTGTGCCTTTGATCTTAACTGTAGCCATATCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAACTGGAAGCCCCTGTGCCTTTGATCTTAACTGTAGCCATATCTC  800

seq1  TTAGTCACACTGATTACTTCAGTTATGGATTTCATGCTATTTGTGACTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCACACTGATTACTTCAGTTATGGATTTCATGCTATTTGTGACTAT  850

seq1  ATAGCACTATCTTCTAACATTTTTGAAATATTTATGTTCTTCCCAGCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCACTATCTTCTAACATTTTTGAAATATTTATGTTCTTCCCAGCTTT  900

seq1  TCCTAGAGTCTTAAATATTTATTGTATATTTTCTAAAAGATTAGAGGATT  950
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCCTAGAGTCTTAAATA-TTATTGTATATTTTCTAAAAGATTAGAGGATT  949

seq1  CTTCTCTTTCAATTTCTGCTGTTTTATACCTAAATTTACAAATGACAGAG  1000
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTCTCTTTCAATTTCTGCTGTTTTATACCTAAATTTAC-AATGACAGAG  998

seq1  TTAAATTGATCTGTATTGTTAGAGGCTGGCCACAATCAAGAGCATAGTAC  1050
      |||||||||||||||||| |||| ||||| ||||||| ||||||||||||
seq2  TTAAATTGATCTGTATTG-TAGA-GCTGG-CACAATC-AGAGCATAGTAC  1044

seq1  CAAGCTGCCCAACATTCATTAGGGCCTCCTTGCTACATCATTACATTAGG  1100
      ||||||||||||||||||| |||    ||||||||||||| |||||||| 
seq2  CAAGCTGCCCAACATTCATAAGG---CCCTTGCTACATCA-TACATTAG-  1089

seq1  AAGGGCATAACATAATGTAATGCAGCAAG-AGTGCTAACTTGGCTCTCTG  1149
       | |||||||||| ||||| ||||||||| ||||||||||| | ||||||
seq2  -AAGGCATAACAT-ATGTATTGCAGCAAGAAGTGCTAACTT-GTTCTCTG  1136

seq1  TATCTTCCATGAAGCCACCAAGCCAATATTGCTTAGGAATTGCCATC  1196
      |||||  |||||   |||| || |||||||||| ||    |||||||
seq2  TATCT--CATGA--GCACCCAGGCAATATTGCTAAG---ATGCCATC  1176