BAC Information

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BAC

Clone NameB6Ng01-118P07
Chromosome11 (Build37)
Map Location 24,928,241 - 24,929,202
singlet/doubletsinglet
Overlap genenone
Upstream geneA830031A19Rik, LOC100042256, Bcl11a, LOC100042282
Downstream gene5730522E02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118P07.bB6Ng01-118P07.g
ACCDH923295DH923296
length1,1391,243
definitionDH923295|Mus musculus domesticus DNA, BAC clone: B6Ng01-118P07, 5' end.DH923296|Mus musculus domesticus DNA, BAC clone: B6Ng01-118P07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagacaggaagcagaaccagccaaagagagaaaagtgtcttgca
agcagcaaatctggaagagcaaggccatcacaactctttgatgtggatag
agagctgcaggatttgggagttaccctgctggattttggtcctgctctgg
ctcagtgtttcctcagcatccgtcttgtttgaaatggggtatatattctg
tgccattgcatgttggacatctgtactttgctttttgatttttagggttt
tggaattaagagattgccttgagtctcaggaaagactgtaaatttgacct
ttaaaaatgttagattatcctttgaagttggactgaatttattttgcatt
atgatatggccacagtggaatgtagtgatttgagtgagaatgacccttat
aggcttataaatacagggacttgagagccagttagtggaactatttggga
agattggagatgtgtcacaggggccagctctgaggtactgaaagacttta
ctcccagtgtgctctcttggatatgagggctcagctaaacctcccaccat
gatttcactccaccatcaggtaccctaatcctctgaaatgcaagcctcat
taaatgctctctttttaagatgtcttaaccaaggtgcttgtcacagaact
agaaaagtaattaatacagtgaatgtaagaaaataaataaaacctatact
tgtataaattgtaatatcagaagtagaaattttgttttcctcgcacatta
ttagattagcttttgtaaattaaaacatcaatgcttggatttatttcagt
agagtacaagcatttaagctgaagcaaactggtagcagagcatcaatata
gagagttagaaaacaaacagaaagaacagtaaaggtgaataagatttacc
tagctttatcaactgctttacttgacacttatcgaatgctccatatagca
caagaaaacacatagtcttcaaatggatctgattgttacttcttaaatta
tttactactactagaaatatttctgggagataaagaaacagccaacacaa
aagtgggtttcagcaataccaatgactaagtagtcaattcctacgagtca
attatttaccatatacattattattattacgataataaa
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttt
tcaaatgctttctccacatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatgcattatgttgatggatttccatatattaaacc
atccctgcatccctggaataaaacctacttgctcaggatggatgattgtt
ttaatgtgttcttggattcagttagcaagaattttattgagtatttttgc
atcaatattcataagggaaattggtctgaagtactctatctttcttggat
ctttctgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagtaccttctacttctattttgtggaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaatccatctg
gtcctgggctttttttgattgggagactattaatgattactaatgacttc
tatttctttaggggatatgggactgtttagattgttaacttgatcctgat
ttaactttggtacctgggatctgtctagaaatttgtccatttcgtccagg
ttattcagttttgttgagtatagccttttgtagaaggatctgatggtgtt
ttggatttcttcagaatctgttgttatgtctcccttttcatttctgattt
tgttgattaggatgctgtccctgcgccctctagtgagtctggctaagggt
ttatttatcttgttgattttctcaaagaaccagctccttgtttggttgat
tctttgaatagttcttgtttccacttggttgatttttgcccctgagtttg
attattttcctgccatcttacttcttcttgggtgaatttgcttccttttt
ttctagagcttttagatgtgttgtcaagctgctagtgtgtgctctctcta
gtttcttttagaggcactcagagctatgagtttcctcttagaaatgcttt
cattgggtcccatagttggagtttttgtgttcatttttcattaacttcta
aaagttcttatttctttctttatttctcttgaccaagttcattgagaaag
tgttgtcgattccacgtgatgtttgcttccaattatgttgtaatgtagaa
tcagcctatgccagggggttgtaggtccttgaaattcagttttgtttccg
ttaaggctgttttatgtgacaacattatatagtgctcacctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_24928241_24929202
seq2: B6Ng01-118P07.b_218_1186

seq1  CGTCTTGTTTGAAATGGGGTATATATTCTGTGCCATTGCATGTTGGACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTTGTTTGAAATGGGGTATATATTCTGTGCCATTGCATGTTGGACAT  50

seq1  CTGTACTTTGCTTTTTGATTTTTAGGGTTTTGGAATTAAGAGATTGCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTTTGCTTTTTGATTTTTAGGGTTTTGGAATTAAGAGATTGCCTT  100

seq1  GAGTCTCAGGAAAGACTGTAAATTTGACCTTTAAAAATGTTAGATTATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCAGGAAAGACTGTAAATTTGACCTTTAAAAATGTTAGATTATCC  150

seq1  TTTGAAGTTGGACTGAATTTATTTTGCATTATGATATGGCCACAGTGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGTTGGACTGAATTTATTTTGCATTATGATATGGCCACAGTGGAA  200

seq1  TGTAGTGATTTGAGTGAGAATGACCCTTATAGGCTTATAAATACAGGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGATTTGAGTGAGAATGACCCTTATAGGCTTATAAATACAGGGAC  250

seq1  TTGAGAGCCAGTTAGTGGAACTATTTGGGAAGATTGGAGATGTGTCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGCCAGTTAGTGGAACTATTTGGGAAGATTGGAGATGTGTCACAG  300

seq1  GGGCCAGCTCTGAGGTACTGAAAGACTTTACTCCCAGTGTGCTCTCTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGCTCTGAGGTACTGAAAGACTTTACTCCCAGTGTGCTCTCTTGG  350

seq1  ATATGAGGGCTCAGCTAAACCTCCCACCATGATTTCACTCCACCATCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGGGCTCAGCTAAACCTCCCACCATGATTTCACTCCACCATCAGG  400

seq1  TACCCTAATCCTCTGAAATGCAAGCCTCATTAAATGCTCTCTTTTTAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTAATCCTCTGAAATGCAAGCCTCATTAAATGCTCTCTTTTTAAGA  450

seq1  TGTCTTAACCAAGGTGCTTGTCACAGAACTAGAAAAGTAATTAATACAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTAACCAAGGTGCTTGTCACAGAACTAGAAAAGTAATTAATACAGT  500

seq1  GAATGTAAGAAAATAAATAAAACCTATACTTGTATAAATTGTAATATCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTAAGAAAATAAATAAAACCTATACTTGTATAAATTGTAATATCAG  550

seq1  AAGTAGAAATTTTGTTTTCCTCGCACATTATTAGATTAGCTTTTGTAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAAATTTTGTTTTCCTCGCACATTATTAGATTAGCTTTTGTAAAT  600

seq1  TAAAACATCAATGCTTGGATTTATTTCAGTAGAGTACAAGCATTTAAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACATCAATGCTTGGATTTATTTCAGTAGAGTACAAGCATTTAAGCT  650

seq1  GAAGCAAACTGGTAGCAGAGCATCAATATAGAGAGTTAGAAAACAAACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAAACTGGTAGCAGAGCATCAATATAGAGAGTTAGAAAACAAACAG  700

seq1  AAAGAACAGTAAAGGTGAATAAGATTTACCTAGCTTTATCAACTGCTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACAGTAAAGGTGAATAAGATTTACCTAGCTTTATCAACTGCTTTA  750

seq1  CTTGACACTTATCGAATGCTCCATATAGCAACAAGAAAACACATAGTCTT  800
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTTGACACTTATCGAATGCTCCATATAGC-ACAAGAAAACACATAGTCTT  799

seq1  CAAATGGATCTGATTGTTTACTTCTTAAATTATTTACTACTACTAGAAAT  850
      |||||||||||||||| |||||||||||||||||||||||||||||||| 
seq2  CAAATGGATCTGATTG-TTACTTCTTAAATTATTTACTACTACTAGAAA-  847

seq1  TATTTCTGGGAGATAAAAGAAACAAGCCAACAACAAAAAGTGGGTTTCAG  900
      |||||||||||||| |||||||| ||||||||   |||||||||||||||
seq2  TATTTCTGGGAGAT-AAAGAAAC-AGCCAACA--CAAAAGTGGGTTTCAG  893

seq1  CAAATACCAAATGACTAAAGTAAGTCAAATCCTACAGAGTCAAATTATTT  950
      | |||||| ||||||| |||| |||||| |||||| ||||| ||||||||
seq2  C-AATACC-AATGACT-AAGT-AGTCAATTCCTAC-GAGTC-AATTATTT  937

seq1  ACCA--------------------ATAATAAA  962
      ||||                    ||||||||
seq2  ACCATATACATTATTATTATTACGATAATAAA  969