BAC Information

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BAC

Clone NameB6Ng01-120I05
Chromosome11 (Build37)
Map Location 14,429,523 - 14,479,431
singlet/doubletdoublet
Overlap gene1700046C09Rik
Upstream geneLOC432535
Downstream gene1700054H16Rik, LOC100042542, LOC100041673, LOC432537
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120I05.bB6Ng01-120I05.g
ACCDH924439DH924440
length800979
definitionDH924439|Mus musculus domesticus DNA, BAC clone: B6Ng01-120I05, 5' end.DH924440|Mus musculus domesticus DNA, BAC clone: B6Ng01-120I05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,478,633 - 14,479,431)(14,429,523 - 14,430,426)
sequence
gaattcaactttaaaaactttgatactgagatatttaagtgtttctgtag
tgggaggcttataatgttgtatcagtgtttagatactgttcctgcatgaa
tatgtcctcactactttcttttagaggtatataccaaagatatgaccttc
cattgttagtgttaaatttgtcattgatgtgttgtagtttttgtagaatt
ctccattaaatatattctaccccatttgttatagactatatcagtatcct
agttatgctggtctgtcatattcttctacatttataagtgatattatttg
ccatatttaaaaaaataagatgatttaatcactctcccactctagtgtcc
atcttgtgattatataactttaaatattttctttagaattgcacattaag
aatatattttgttctaagagcattggaacaaaatcatagaaaatgaacta
ggggaaggactgaaggatctgaagggggtagctaccccttaggaagactg
gcaatatcaactagaccacccagagctccaaggtactaagccatcaaaaa
agaacataaatgagttcgtccatggtccacaatgtacatgtagcaaagga
ctgccttgtctgacctcagttggatgttatatgcttagtcctgtggagga
ttgatgccacagagaaggcagatgctagaggagagaggtggaagtgggtt
ggtgggtgggacagcaacctcttagaggcaaaatgaagtgaagagaggat
tggggttcatgaaagagggacccatgaaggagggcacatttgaaactgca

gaattcttcacatccagatacctctctaccagtgaagatgaaagttcccc
caaccatcaggaggagatagaatgaatgttggtcctttcaagttatacat
agaatagaaataacttattaataggtgcaatagaattcctgtgagaaatt
gggctggcgagctaaagaagggggagcctaaagcactgaaagattaaggc
ccatttcttccaccaatttaaataaaatctatctcaggagacaaaagggt
gagtggaggaatggagaggatgaggtcaggtctctttcttgagaaaagga
ccaataagaccctctcacaattaagtacacgtatgttctagaatcttaat
ttgtttatattttaagtatcatatacagaaacagcatttcggttttttta
tatcatttttactagatattttcttcatttacatttcaaatgctatccca
aaagtcccctatgacctccccctgccctgctcctatacccacttgctccc
atttcttggccctggaattcccctgtactggggcatataaagtttgctag
aacaaggggtctctcttcctaataatggccaactaggccattttctgcta
catatgcagatagagacacaagttatggggggtactggttagtttatatt
gttgttccacctatagggttgcagacccctttagctccttgggtactttc
tctagctcctccattgggggccctgtgttccatcctatagatgactgtga
gcatccacttttgtatttgccaggcactggcaaagcctcacaggagagag
ctatatcaggtcctttcagcaaaaccttgctggcatatgcaatagtgtgt
gtttggtggctgattatgggatggacccccaggtgggcagtctttgatgg
tccatcctttcatcttagctccaaatttgtctctgcactccttccataga
tattttattccctatctatggaggaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_14478633_14479431
seq2: B6Ng01-120I05.b_49_848 (reverse)

seq1  TGCAG-TTCAAATGCTGCCCTCCTTCAT-GGTCCCTCTTTCATGAACCCC  48
      ||||| |||||||| ||||||||||||| |||||||||||||||||||||
seq2  TGCAGTTTCAAATG-TGCCCTCCTTCATGGGTCCCTCTTTCATGAACCCC  49

seq1  TATCCTCTCTTCACTTCATTTTGCCTCTAAGAGGTTGCTGTCCCACCCAC  98
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCTCTTCACTTCATTTTGCCTCTAAGAGGTTGCTGTCCCACCCAC  99

seq1  CAACCCACTTCCACCTCTCTCCTCTAGCATCTGCCTTCTCTGTGGCATCA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCACTTCCACCTCTCTCCTCTAGCATCTGCCTTCTCTGTGGCATCA  149

seq1  ATCCTCCACAGGACTAAGCATATAACATCCAACTGAGGTCAGACAAGGCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCACAGGACTAAGCATATAACATCCAACTGAGGTCAGACAAGGCA  199

seq1  GTCCTTTGCTACATGTACATTGTGGACCATGGACGAACTCATTTATGTTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTGCTACATGTACATTGTGGACCATGGACGAACTCATTTATGTTC  249

seq1  TTTTTTGATGGCTTAGTACCTTGGAGCTCTGGGTGGTCTAGTTGATATTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGATGGCTTAGTACCTTGGAGCTCTGGGTGGTCTAGTTGATATTG  299

seq1  CCAGTCTTCCTAAGGGGTAGCTACCCCCTTCAGATCCTTCAGTCCTTCCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTTCCTAAGGGGTAGCTACCCCCTTCAGATCCTTCAGTCCTTCCC  349

seq1  CTAGTTCATTTTCTATGATTTTGTTCCAATGCTCTTAGAACAAAATATAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCATTTTCTATGATTTTGTTCCAATGCTCTTAGAACAAAATATAT  399

seq1  TCTTAATGTGCAATTCTAAAGAAAATATTTAAAGTTATATAATCACAAGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATGTGCAATTCTAAAGAAAATATTTAAAGTTATATAATCACAAGA  449

seq1  TGGACACTAGAGTGGGAGAGTGATTAAATCATCTTATTTTTTTAAATATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACTAGAGTGGGAGAGTGATTAAATCATCTTATTTTTTTAAATATG  499

seq1  GCAAATAATATCACTTATAAATGTAGAAGAATATGACAGACCAGCATAAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATAATATCACTTATAAATGTAGAAGAATATGACAGACCAGCATAAC  549

seq1  TAGGATACTGATATAGTCTATAACAAATGGGGTAGAATATATTTAATGGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATACTGATATAGTCTATAACAAATGGGGTAGAATATATTTAATGGA  599

seq1  GAATTCTACAAAAACTACAACACATCAATGACAAATTTAACACTAACAAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAAAAACTACAACACATCAATGACAAATTTAACACTAACAAT  649

seq1  GGAAGGTCATATCTTTGGTATATACCTCTAAAAGAAAGTAGTGAGGACAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGTCATATCTTTGGTATATACCTCTAAAAGAAAGTAGTGAGGACAT  699

seq1  ATTCATGCAGGAACAGTATCTAAACACTGATACAACATTATAAGCCTCCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGCAGGAACAGTATCTAAACACTGATACAACATTATAAGCCTCCC  749

seq1  ACTACAGAAACACTTAAATATCTCAGTATCAAAGTTTTTAAAGTTGAATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGAAACACTTAAATATCTCAGTATCAAAGTTTTTAAAGTTGAATT  799

seq1  C  799
      |
seq2  C  800

seq1: chr11_14429523_14430426
seq2: B6Ng01-120I05.g_67_966

seq1  GAATTCTTCACATCCAGATACCTCTCTACCAGTGAAGATGAAAGTTCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACATCCAGATACCTCTCTACCAGTGAAGATGAAAGTTCCCC  50

seq1  CAACCATCAGGAGGAGATAGAATGAATGTTGGTCCTTTCAAGTTATACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCATCAGGAGGAGATAGAATGAATGTTGGTCCTTTCAAGTTATACAT  100

seq1  AGAATAGAAATAACTTATTAATAGGTGCAATAGAATTCCTGTGAGAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGAAATAACTTATTAATAGGTGCAATAGAATTCCTGTGAGAAATT  150

seq1  GGGCTGGCGAGCTAAAGAAGGGGGAGCCTAAAGCACTGAAAGATTAAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGCGAGCTAAAGAAGGGGGAGCCTAAAGCACTGAAAGATTAAGGC  200

seq1  CCATTTCTTCCACCAATTTAAATAAAATCTATCTCAGGAGACAAAAGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCTTCCACCAATTTAAATAAAATCTATCTCAGGAGACAAAAGGGT  250

seq1  GAGTGGAGGAATGGAGAGGATGAGGTCAGGTCTCTTTCTTGAGAAAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGAGGAATGGAGAGGATGAGGTCAGGTCTCTTTCTTGAGAAAAGGA  300

seq1  CCAATAAGACCCTCTCACAATTAAGTACACGTATGTTCTAGAATCTTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAAGACCCTCTCACAATTAAGTACACGTATGTTCTAGAATCTTAAT  350

seq1  TTGTTTATATTTTAAGTATCATATACAGAAACAGCATTTCGGTTTTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATATTTTAAGTATCATATACAGAAACAGCATTTCGGTTTTTTTA  400

seq1  TATCATTTTTACTAGATATTTTCTTCATTTACATTTCAAATGCTATCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTTTTACTAGATATTTTCTTCATTTACATTTCAAATGCTATCCCA  450

seq1  AAAGTCCCCTATGACCTCCCCCTGCCCTGCTCCTATACCCACTTGCTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCCCTATGACCTCCCCCTGCCCTGCTCCTATACCCACTTGCTCCC  500

seq1  ATTTCTTGGCCCTGGAATTCCCCTGTACTGGGGCATATAAAGTTTGCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTGGCCCTGGAATTCCCCTGTACTGGGGCATATAAAGTTTGCTAG  550

seq1  AACAAGGGGTCTCTCTTCCTAATAATGGCCAACTAGGCCATTTTCTGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGGGTCTCTCTTCCTAATAATGGCCAACTAGGCCATTTTCTGCTA  600

seq1  CATATGCAGATAGAGACACAAGTTATGGGGGGTACTGGTTAGTTTATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCAGATAGAGACACAAGTTATGGGGGGTACTGGTTAGTTTATATT  650

seq1  GTTGTTCCACCTATAGGGTTGCAGACCCCTTTAGCTCCTTGGGTACTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCCACCTATAGGGTTGCAGACCCCTTTAGCTCCTTGGGTACTTTC  700

seq1  TCTAGCTCCTCCATTGGGGGCCCTGTGTTCCATCCTATAGATGACTGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTCCTCCATTGGGGGCCCTGTGTTCCATCCTATAGATGACTGTGA  750

seq1  GCATCCACTTTTGTATTTGCCAGGCACTGGCAAAGCCTCACAGGAGAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCACTTTTGTATTTGCCAGGCACTGGCAAAGCCTCACAGGAGAGAG  800

seq1  CTATATCAGGGTCCTTTCAGCAAAACCTTGCTGGCATATGCAATAGTGTG  850
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCA-GGTCCTTTCAGCAAAACCTTGCTGGCATATGCAATAGTGTG  849

seq1  TGTTTGGTGGCTGATTATGGGATGGACCCCCCAGGTGGGGCAGTCTTTGG  900
      |||||||||||||||||||||||||| ||||||||| ||||||||||| |
seq2  TGTTTGGTGGCTGATTATGGGATGGA-CCCCCAGGT-GGGCAGTCTTT-G  896

seq1  ATGG  904
      ||||
seq2  ATGG  900