BAC Information

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BAC

Clone NameB6Ng01-120M21
Chromosome11 (Build37)
Map Location 12,239,355 - 12,355,001
singlet/doubletdoublet
Overlap geneCobl
Upstream geneZpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc, Grb10
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120M21.bB6Ng01-120M21.g
ACCDH924651DH924652
length1,0271,097
definitionDH924651|Mus musculus domesticus DNA, BAC clone: B6Ng01-120M21, 5' end.DH924652|Mus musculus domesticus DNA, BAC clone: B6Ng01-120M21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,353,978 - 12,355,001)(12,239,355 - 12,240,456)
sequence
gaattcaacactatgcaggtttcttacatcagtgatgcatatttgagagt
ttaatgggaattgatagatggtttgctaaagttagccttcatgctccctt
gaggagaaggctgcacattcattcacataacttttttttttttttttttt
agaaaaggcagtgttttcataatgaaaaatatttattggcttaaaataaa
catgtttgttttaaatatgtcagtgtgttacatggatttctgagagatgt
ttttcactcgtccttatttcttttgttagtgatacaaggagtaaagacgt
gctctgtggctttgggggtggcagtggtggtgagttttgctgcagaagct
tgactgtggttggcatttctgctttctttttgtgctaagcatgtcacact
gcagatcttgtggggtggaaaagtaagactctccaagtcagtctctgtca
ctgagacatggacagctcctaccaaccgacttaccagtctccttgtttcc
cacccctctcgatattctgcaattatctggattatagagttttaaaaaat
gattttagatttaatttattattattattattattattattattattatt
atgtgtgtgtatatctatttgtgccagctacagagtgcatgtggaagtaa
gaaaactttcaggaattggctttctttctattgtgagtctgaggaatcaa
acttagaccatcaggtttatatcgtaagtgctttatccctgagccatctc
actgttcctgggttgtagaatttcatgagatattttacaaggagtaagag
tatccctgtggagtgagtgcctgccataatggtggcttccctttttcctt
tccctgtaactgttttctatcagcgaactatcagactaacaggaaggaac
agagacactaagttaccagtatggaacatggtccttacagaagcatgtaa
ggagatgtgcactgttcccattgtttcccacagaaaagcaatagcaaatg
ctactgtaataggaaactggagaactt
gaattcttgtttagtatgcataaagccctggagctgagtgtggtgggaga
tatgccagcaatcagaactcaggaggtagagacagcaggatcaagagttc
aaggctatccgtgactggccaaacatattgagtgagctggaggccaacct
aggctatgagaccctgtctcaaacaaggaaacaaacaacaaaaaggatca
cccttgaagtctaatggtaaattaggcatttcaagtttcaataaagtatt
gctttggaagtaccctcagcagttttaggattttcaggaatattctaacc
actaaatcaaagaagcagtggtgttttcagttaaggttctaacatctatg
atcattctgtctgttcatatgctacgagattttatgtatccatgtgcata
cttaaccaaagcatgagaaaaatgaatggcatttctgctattgaggagag
tgttctaccagtatttttgaccaaataaggaacacattcacagaaaaccc
tactttggatgatgctaatacctgatcgtaacaagtctttaccattttgt
tttcatagtcaacattgctaattattttgaaaccctaaggcaaaaagccc
aagatactgttaagaatccttgtcagttggaagtctgtggtgccgaccat
tagaatgaaacatttcaaataattcagaatacatttaaaacattttcttt
ataccatgaacaaaatgacatatagtttggtaggcataaaaggtggctag
atcatagagccctaccgtgacacccttccattctctgcccacctctacct
gaaagttcaccataatagcctaaggtcaagatgcatggccagagcaatgg
actctgaagaaaggcactatcctctgcctaaagagaccatacccttctgc
ccagtaatccccctaaatgctctgcagagagatttttataaaagtggcat
tgcttatttcccagttccaacatttctaggaaatcttttgaaaattacct
ttcaaaataatactgatgatcaatcatgagtatttattaggtaaatatat
accctaataacattttacatttcacataaatggaccgtggggaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12353978_12355001
seq2: B6Ng01-120M21.b_47_1073 (reverse)

seq1  AAGTTCT-CAGTTTCCTATTACAGTAGCATTTGCTATGCCTCTACTGTGT  49
      ||||||| |||||||||||||||||||||||||||||  || | ||||| 
seq2  AAGTTCTCCAGTTTCCTATTACAGTAGCATTTGCTATTGCTTTTCTGTG-  49

seq1  GAAAACAATGGGAAACAGTGCACATCTCCTTACATGC-TCTGTAAGGACC  98
      | |||||||||| |||||||||||||||||||||||| ||||||||||||
seq2  GGAAACAATGGG-AACAGTGCACATCTCCTTACATGCTTCTGTAAGGACC  98

seq1  ATGTTCCATACTGGTAACTTAGTGTCTCTGTTCCTTCTTG-TAGTCTGAT  147
      ||||||||||||||||||||||||||||||||||||| || |||||||||
seq2  ATGTTCCATACTGGTAACTTAGTGTCTCTGTTCCTTCCTGTTAGTCTGAT  148

seq1  AGTTCGCTGATAGAAAACAGTAACAGGGAAAAGGAAAAAGGGAAG-CACC  196
      ||||||||||||||||||||| |||||| |||||||||||||||| ||||
seq2  AGTTCGCTGATAGAAAACAGTTACAGGG-AAAGGAAAAAGGGAAGCCACC  197

seq1  A-TATGGCAGGCACTCACTCCACA-GGATACTCTTACTCCTTGTTAAATT  244
      | |||||||||||||||||||||| |||||||||||||||||| |||| |
seq2  ATTATGGCAGGCACTCACTCCACAGGGATACTCTTACTCCTTG-TAAAAT  246

seq1  ATCTCATG-AATTCTACAACCCAGGAACAGTGAGATGGCTCAGGGATAAA  293
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATGAAATTCTACAACCCAGGAACAGTGAGATGGCTCAGGGATAAA  296

seq1  GCACTTACGATATAAACCTGATGGTCTAAGTTTGATTCCTCAGACTCACA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTACGATATAAACCTGATGGTCTAAGTTTGATTCCTCAGACTCACA  346

seq1  ATAGAAAGAAAGCCAATTCCTGAAAGTTTTCTTACTTCCACATGCACTCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAGAAAGCCAATTCCTGAAAGTTTTCTTACTTCCACATGCACTCT  396

seq1  GTAGCTGGCACAAATAGATATACACACACATAATAATAATAATAATAATA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTGGCACAAATAGATATACACACACATAATAATAATAATAATAATA  446

seq1  ATAATAATAATAATAAATTAAATCTAAAATCATTTTTTAAAACTCTATAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATAATAATAAATTAAATCTAAAATCATTTTTTAAAACTCTATAA  496

seq1  TCCAGATAATTGCAGAATATCGAGAGGGGTGGGAAACAAGGAGACTGGTA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATAATTGCAGAATATCGAGAGGGGTGGGAAACAAGGAGACTGGTA  546

seq1  AGTCGGTTGGTAGGAGCTGTCCATGTCTCAGTGACAGAGACTGACTTGGA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGGTTGGTAGGAGCTGTCCATGTCTCAGTGACAGAGACTGACTTGGA  596

seq1  GAGTCTTACTTTTCCACCCCACAAGATCTGCAGTGTGACATGCTTAGCAC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTACTTTTCCACCCCACAAGATCTGCAGTGTGACATGCTTAGCAC  646

seq1  AAAAAGAAAGCAGAAATGCCAACCACAGTCAAGCTTCTGCAGCAAAACTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAGCAGAAATGCCAACCACAGTCAAGCTTCTGCAGCAAAACTC  696

seq1  ACCACCACTGCCACCCCCAAAGCCACAGAGCACGTCTTTACTCCTTGTAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCACTGCCACCCCCAAAGCCACAGAGCACGTCTTTACTCCTTGTAT  746

seq1  CACTAACAAAAGAAATAAGGACGAGTGAAAAACATCTCTCAGAAATCCAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAACAAAAGAAATAAGGACGAGTGAAAAACATCTCTCAGAAATCCAT  796

seq1  GTAACACACTGACATATTTAAAACAAACATGTTTATTTTAAGCCAATAAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACACTGACATATTTAAAACAAACATGTTTATTTTAAGCCAATAAA  846

seq1  TATTTTTCATTATGAAAACACTGCCTTTTCTAAAAAAAAAAAAAAAAAAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCATTATGAAAACACTGCCTTTTCTAAAAAAAAAAAAAAAAAAA  896

seq1  GTTATGTGAATGAATGTGCAGCCTTCTCCTCAAGGGAGCATGAAGGCTAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTGAATGAATGTGCAGCCTTCTCCTCAAGGGAGCATGAAGGCTAA  946

seq1  CTTTAGCAAACCATCTATCAATTCCCATTAAACTCTCAAATATGCATCAC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCAAACCATCTATCAATTCCCATTAAACTCTCAAATATGCATCAC  996

seq1  TGATGTAAGAAACCTGCATAGTGTTGAATTC  1024
      |||||||||||||||||||||||||||||||
seq2  TGATGTAAGAAACCTGCATAGTGTTGAATTC  1027

seq1: chr11_12239355_12240456
seq2: B6Ng01-120M21.g_69_1165

seq1  GAATTCTTGCTTAGTATGCATAAAGCCCTGGAGCTGAGTGTGGTGGGAGA  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTTAGTATGCATAAAGCCCTGGAGCTGAGTGTGGTGGGAGA  50

seq1  TATGCCAGCAATCAGAACTCAGGAGGTAGAGACAGCAGGATCAAGAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCAGCAATCAGAACTCAGGAGGTAGAGACAGCAGGATCAAGAGTTC  100

seq1  AAGGCTATCCGTGACTGGCCAAACATATTGAGTGAGCTGGAGGCCAACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTATCCGTGACTGGCCAAACATATTGAGTGAGCTGGAGGCCAACCT  150

seq1  AGGCTATGAGACCCTGTCTCAAACAAGGAAACAAACAACAAAAAGGATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATGAGACCCTGTCTCAAACAAGGAAACAAACAACAAAAAGGATCA  200

seq1  CCCTTGAAGTCTAATGGTAAATTAGGCATTTCAAGTTTCAATAAAGTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGAAGTCTAATGGTAAATTAGGCATTTCAAGTTTCAATAAAGTATT  250

seq1  GCTTTGGAAGTACCCTCAGCAGTTTTAGGATTTTCAGGAATATTCTAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGAAGTACCCTCAGCAGTTTTAGGATTTTCAGGAATATTCTAACC  300

seq1  ACTAAATCAAAGAAGCAGTGGTGTTTTCAGTTAAGGTTCTAACATCTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATCAAAGAAGCAGTGGTGTTTTCAGTTAAGGTTCTAACATCTATG  350

seq1  ATCATTCTGTCTGTTCATATGCTACGAGATTTTATGTATCCATGTGCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCTGTCTGTTCATATGCTACGAGATTTTATGTATCCATGTGCATA  400

seq1  CTTAACCAAAGCATGAGAAAAATGAATGGCATTTCTGCTATTGAGGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACCAAAGCATGAGAAAAATGAATGGCATTTCTGCTATTGAGGAGAG  450

seq1  TGTTCTACCAGTATTTTTGACCAAATAAGGAACACATTCACAGAAAACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTACCAGTATTTTTGACCAAATAAGGAACACATTCACAGAAAACCC  500

seq1  TACTTTGGATGATGCTAATACCTGATCGTAACAAGTCTTTACCATTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGGATGATGCTAATACCTGATCGTAACAAGTCTTTACCATTTTGT  550

seq1  TTTCATAGTCAACATTGCTAATTATTTTGAAACCCTAAGGCAAAAAGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAGTCAACATTGCTAATTATTTTGAAACCCTAAGGCAAAAAGCCC  600

seq1  AAGATACTGTTAAGAATCCTTGTCAGTTGGAAGTCTGTGGTGCCGACCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACTGTTAAGAATCCTTGTCAGTTGGAAGTCTGTGGTGCCGACCAT  650

seq1  TAGAATGAAACATTTCAAATAATTCAGAATACATTTAAAACATTTTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGAAACATTTCAAATAATTCAGAATACATTTAAAACATTTTCTTT  700

seq1  ATACCATGAACAAAATGACATATAGTTTGGTAGGCATAAAAGGTGGCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATGAACAAAATGACATATAGTTTGGTAGGCATAAAAGGTGGCTAG  750

seq1  ATCATAGAGCCCTACCGTGACACCCTTCCATTCTCTGCCCACCTCTACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGAGCCCTACCGTGACACCCTTCCATTCTCTGCCCACCTCTACCT  800

seq1  GAAAGTTCACCATAATAGCCTAAGGTCAAGATGCATGGCCAGAGCAATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTCACCATAATAGCCTAAGGTCAAGATGCATGGCCAGAGCAATGG  850

seq1  ACTCTGAAGAAAGGCACTATCCTCTGCCTAAAGAGACCATACCCTTCTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGAAGAAAGGCACTATCCTCTGCCTAAAGAGACCATACCCTTCTGC  900

seq1  CCAGTAATCCCCCTAAATGCTCTGCAGAGAGATTTTTATAAAAGTGGCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAATCCCCCTAAATGCTCTGCAGAGAGATTTTTATAAAAGTGGCAT  950

seq1  TGCTTATTTCCCAGTTCCAACATTTCTAGGAAATCTTCTTAAAAATTACC  1000
      ||||||||||||||||||||||||||||||||||||| || |||||||||
seq2  TGCTTATTTCCCAGTTCCAACATTTCTAGGAAATCTT-TTGAAAATTACC  999

seq1  TTTAAAAATAAATACTGATGATCAAATCATGAGTATTTAATTAGGTAAAA  1050
      ||| ||||| ||||||||||||| |||||||||||||| ||||||| |||
seq2  TTTCAAAAT-AATACTGATGATC-AATCATGAGTATTT-ATTAGGT-AAA  1045

seq1  TATATA-CCTAATATACATTTTTACATTTCACATAAATGGAACAT-GGGA  1098
      |||||| ||||||| ||| |||||||||||||||||||||| | | ||||
seq2  TATATACCCTAATA-ACA-TTTTACATTTCACATAAATGGACCGTGGGGA  1093

seq1  AAAT  1102
      ||||
seq2  AAAT  1097