BAC Information

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BAC

Clone NameB6Ng01-120N06
Chromosome11 (Build37)
Map Location 104,534,183 - 104,690,570
singlet/doubletdoublet
Overlap geneLOC666739, LOC629960, LOC666749
Upstream geneGosr2, Wnt9b, Wnt3, Nsf, EG667631, Arf2, LOC100042645, Crhr1, 4933407P14Rik, Mapt, 1700081L11Rik, Cdc27, Myl4, LOC666721, EG629959, Itgb3
Downstream geneLOC632784, LOC276809, LOC100041125, 4921510J17Rik, Mettl2, LOC666771, Tlk2, 1700052K11Rik, Mrc2, Rnf190, EG666807, Tanc2, LOC667737
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120N06.bB6Ng01-120N06.g
ACCDH924668DH924669
length462991
definitionDH924668|Mus musculus domesticus DNA, BAC clone: B6Ng01-120N06, 5' end.DH924669|Mus musculus domesticus DNA, BAC clone: B6Ng01-120N06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,534,183 - 104,534,650)(104,689,906 - 104,690,570)
sequence
agggtttggtggcaagtgcatttattcactgcgcagtcttgccagccttg
aacatctacttttgatctattttcatcttggaattctttagtttcttcat
atcaagtgttccttaaaaaacaaacatgaaaaacaaaacaaaaactaaaa
gaagcaaatatgtatggatccctgaaaaatcaccagtatacggctaattg
agtataataactcttttctttgcctcatcatttccttctataatgaacat
ttggggatggggatggagaaaaggctcagtggttaggaatatgtaattgt
tctttagaagacacgagttcagttcccagtacccacataaggcctctcac
aactgcccgcgactaacttctgaggatctcatgccatcttctggagtctg
tgagcacctgcactcaagtgcacaacccttcctccctgggcagaattaac
accccccccccc
gaattcctaagggtataatcacaactcccttataactctacaaacatggg
taatgctgactaacagccttgatgactgctctaactctcttgaaggcata
tcaactgttttgaaagttaattttagaaatgttcaccatgagatggaaat
gacttctcacgctccagctgttctctagatgttctctctctctccacatc
ttttatgacattttccatgtcactgacatcaatttctcctccttcaggga
aaagcaaagaaatatgaaatgtttttttaattataatcccaaatgatgag
gacaagttagggcacagcaacttgataaacaataaatcttaagatccaga
gaatcgttttaatttttaaaattttgtcactataatgattataaaataac
atctcacacttgaaattcaagtcacttaacgagcatttgtaaaattggta
caaatacatatgtaattttgtgtatgtaattagagtaaaaatcaagagtg
agtgatttatgaaaatgtccatatgcttaaagagtaaggagtatgtttct
aaataaaccacatgtcaaatatattctaagtggaaatgagaatatatatt
taatcacaattagaactgtggaataaagcaaagacatgttgagaaaaatt
agtcttaaatatatatgctaaaatagatgaaaagataaataacctagatt
ttatcttaaaagcaaagaacaacaaacttattctcccctaaaaaatagtc
gaaaatagatactacgagaaaagaaatgattaaagaaattttaaacagga
agaactgatattgctcaaagttgagtgttggaaagaagagcaaaattggg
taaatagcttactgagtgacaaagaaaagagacagttaaagaaacacaaa
gattatcaccagcatcaaaggagacattactaccattccaacagatacta
atatactaataggactatatgattattatacaaggaaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_104534183_104534650
seq2: B6Ng01-120N06.b_46_513

seq1  GAATTCAGGGTTTGGTGGCAAGTGCATTTATTCACTGCGCAGTCTTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGTTTGGTGGCAAGTGCATTTATTCACTGCGCAGTCTTGCCA  50

seq1  GCCTTGAACATCTACTTTTGATCTATTTTCATCTTGGAATTCTTTAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAACATCTACTTTTGATCTATTTTCATCTTGGAATTCTTTAGTTT  100

seq1  CTTCATATCAAGTGTTCCTTAAAAAACAAACATGAAAAACAAAACAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATATCAAGTGTTCCTTAAAAAACAAACATGAAAAACAAAACAAAAA  150

seq1  CTAAAAGAAGCAAATATGTATGGATCCCTGAAAAATCACCAGTATACGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGAAGCAAATATGTATGGATCCCTGAAAAATCACCAGTATACGGC  200

seq1  TAATTGAGTATAATAACTCTTTTCTTTGCCTCATCATTTCCTTCTATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAGTATAATAACTCTTTTCTTTGCCTCATCATTTCCTTCTATAAT  250

seq1  GAACATTTGGGGATGGGGATGGAGAAAAGGCTCAGTGGTTAGGAATATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTTGGGGATGGGGATGGAGAAAAGGCTCAGTGGTTAGGAATATGT  300

seq1  AATTGTTCTTTAGAAGACACGAGTTCAGTTCCCAGTACCCACATAAGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTCTTTAGAAGACACGAGTTCAGTTCCCAGTACCCACATAAGGCC  350

seq1  TCTCACAACTGCCCGCGACTAACTTCTGAGGATCTCATGCCATCTTCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACAACTGCCCGCGACTAACTTCTGAGGATCTCATGCCATCTTCTGG  400

seq1  AGTCTGTGAGCACCTGCACTCAAGTGCACAACCCTTCCTCCCTGGGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTGAGCACCTGCACTCAAGTGCACAACCCTTCCTCCCTGGGCAGA  450

seq1  ATTAACACCCCCCCCCCC  468
      ||||||||||||||||||
seq2  ATTAACACCCCCCCCCCC  468

seq1: chr11_104689906_104690570
seq2: B6Ng01-120N06.g_66_730 (reverse)

seq1  TATATATTTAAGACTAATTTTTCTCAACATGTCTTTGCTTTATTCCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTTAAGACTAATTTTTCTCAACATGTCTTTGCTTTATTCCACAG  50

seq1  TTCTAATTGTGATTAAATATATATTCTCATTTCCACTTAGAATATATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATTGTGATTAAATATATATTCTCATTTCCACTTAGAATATATTTG  100

seq1  ACATGTGGTTTATTTAGAAACATACTCCTTACTCTTTAAGCATATGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGGTTTATTTAGAAACATACTCCTTACTCTTTAAGCATATGGACA  150

seq1  TTTTCATAAATCACTCACTCTTGATTTTTACTCTAATTACATACACAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATAAATCACTCACTCTTGATTTTTACTCTAATTACATACACAAAA  200

seq1  TTACATATGTATTTGTACCAATTTTACAAATGCTCGTTAAGTGACTTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATATGTATTTGTACCAATTTTACAAATGCTCGTTAAGTGACTTGAA  250

seq1  TTTCAAGTGTGAGATGTTATTTTATAATCATTATAGTGACAAAATTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGTGTGAGATGTTATTTTATAATCATTATAGTGACAAAATTTTAA  300

seq1  AAATTAAAACGATTCTCTGGATCTTAAGATTTATTGTTTATCAAGTTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAAACGATTCTCTGGATCTTAAGATTTATTGTTTATCAAGTTGCT  350

seq1  GTGCCCTAACTTGTCCTCATCATTTGGGATTATAATTAAAAAAACATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCTAACTTGTCCTCATCATTTGGGATTATAATTAAAAAAACATTTC  400

seq1  ATATTTCTTTGCTTTTCCCTGAAGGAGGAGAAATTGATGTCAGTGACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTTTGCTTTTCCCTGAAGGAGGAGAAATTGATGTCAGTGACATG  450

seq1  GAAAATGTCATAAAAGATGTGGAGAGAGAGAGAACATCTAGAGAACAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGTCATAAAAGATGTGGAGAGAGAGAGAACATCTAGAGAACAGCT  500

seq1  GGAGCGTGAGAAGTCATTTCCATCTCATGGTGAACATTTCTAAAATTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCGTGAGAAGTCATTTCCATCTCATGGTGAACATTTCTAAAATTAAC  550

seq1  TTTCAAAACAGTTGATATGCCTTCAAGAGAGTTAGAGCAGTCATCAAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAACAGTTGATATGCCTTCAAGAGAGTTAGAGCAGTCATCAAGGC  600

seq1  TGTTAGTCAGCATTACCCATGTTTGTAGAGTTATAAGGGAGTTGTGATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTCAGCATTACCCATGTTTGTAGAGTTATAAGGGAGTTGTGATTA  650

seq1  TACCCTTAGGAATTC  665
      |||||||||||||||
seq2  TACCCTTAGGAATTC  665