BAC Information

Click to search

BAC

Clone NameB6Ng01-121G12
Chromosome11 (Build37)
Map Location 6,137,121 - 6,137,929
singlet/doubletsinglet
Overlap genenone
Upstream geneKremen1, Znrf3, LOC100042016, LOC382478, Xbp1, Ccdc117, LOC100041183, Ankrd36, LOC665181, Mrps24, 2010005J08Rik, 2210015D19Rik, Dbnl, Pgam2, Polm, Aebp1, Pold2, Myl7, Gck, Ykt6, Camk2b, LOC100042156, Nudcd3, LOC100042173, Npc1l1, LOC100041242
Downstream geneLOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, Ccm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332, Adcy1, LOC100041347, Igfbp1, Igfbp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121G12.bB6Ng01-121G12.g
ACCDH925098DH925099
length1,0171,153
definitionDH925098|Mus musculus domesticus DNA, BAC clone: B6Ng01-121G12, 5' end.DH925099|Mus musculus domesticus DNA, BAC clone: B6Ng01-121G12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactggtcttaccacgttccccaccatcctgaagcagctggtctg
atagaaagatggaatggccttttgaagacgcagttacagcgccaattagg
tggtaacagcttggaaggctggggtagagttcttcagaaggcagtatatg
ctttgaatcagcgctcgatatatggtacagtttcacccatagccaggatt
catgggtccaggaatcaaggggtggaaaaaggaatagttccacttactat
cactcctagtgaccctctaggaaaatttttgcttcctgtccccataactc
taggttctgctggcttagaagttttggctccagagaggggagtgctccta
ccaggagctacaacaaacattccattgaactggaagctcaaacttccccc
tggtcattttaggcttctaatgcccttaaaccaacaggctaaaaaaggaa
taacagtgttaggaggggtgatagatccagattaccatggggaaattgga
ttacctcttcacaatggtggtaagcaagattatgtctggagtgtaggaga
tcccttagggcgtctcttagtactaccatgtcctgtgattaaagtcaatg
ggaaactacaacagcctaatccaagcaggatgacaaaggatgcagaccca
tcaggaatgaaggtatgggtcaatcctccaggaaaagagccaagacctgc
tgaggtgctggctgaaggagaaggaaatacagaatgggtagtagaggaag
gtagttataaataccaattaaagccacgtaaccagttgcagaaacgagga
ttataaagtaatatgaatgcccattgtaaatttactaatgcgtttgcgat
tgtacgagggatagttatatcatgttaggcgtatttacaaccttgttatt
gtttcatgtgaacatgagatatatttgtgtcaaattgacaggggtggatg
tagtggctatcctggtgtcaactgacaatattggaatgaactacaatccg
gaatgagctcacagtga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagatagaggaacactcctccattgttgtgg
gattgcaggcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaattggacatagtactaccagaggatccagcaatacctctcctgggca
tatatccagaagatgccccaactggtaagaaggacacatgttccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaaaagaggaatggatacagaaaatgtggtacatctacacaatgg
ggtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggagggcatcatccttagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagcccaaaacct
aggatacccaagatataagatacaatttcctaaacacaggaaactcaaga
aaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaac
aaaacacccttggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaatgctgacaccattgcatacactagcaagattttatcaaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcactaatggatggatcacagggctactatg
agagctagagaagtacccaagagctaaagggatctgcaccctatagtgac
acattatgactacagtacccagattctgactctagctgcatatgtatcaa
gatgtctagtcgcatcacttgaaagagagtcaatgaccgcaaccttatat
gctcagttacagggacttcaggctaaaaatgggaagttggtgataaggga
atg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_6137121_6137929
seq2: B6Ng01-121G12.b_593_1064

seq1  GGAGATCCCTTAGGGTGTCTCCTAGTACTACCAAGTCCTGTGATTAAAGT  50
      ||||||||||||||| ||||| ||||||||||| ||||||||||||||||
seq2  GGAGATCCCTTAGGGCGTCTCTTAGTACTACCATGTCCTGTGATTAAAGT  50

seq1  CAATAGAAAAC-AAAACAGCCTAATCCAAGCAGGATGACAAAGGACACAG  99
      |||| | |||| | |||||||||||||||||||||||||||||||  |||
seq2  CAATGGGAAACTACAACAGCCTAATCCAAGCAGGATGACAAAGGATGCAG  100

seq1  ACCCATCAGGGGTGAAGGTATGGGTCACTCCTCCAGGAAAAGAGCCAAGA  149
      ||||||||||  ||||||||||||||| ||||||||||||||||||   |
seq2  ACCCATCAGGAATGAAGGTATGGGTCAATCCTCCAGGAAAAGAGCC---A  147

seq1  AGACCAGCTGAGGTGCTTGCAGAGGATGGAGAAAATACAGAATGGGTAGT  199
      ||||| ||||||||||| || || |  | || ||||||||||||||||||
seq2  AGACCTGCTGAGGTGCTGGCTGAAGGAGAAGGAAATACAGAATGGGTAGT  197

seq1  AGAGGGAGGTAGTTATAAATACCATCTAAGACCACATGACCAGTTGCAGA  249
      ||||| ||||||||||||||||||  |||  |||| | ||||||||||||
seq2  AGAGGAAGGTAGTTATAAATACCAATTAAAGCCACGTAACCAGTTGCAGA  247

seq1  AATGAGGATTATAAAGTAATATCAATGCTTCTGGTTTATATTGTTAAGAA  299
      || ||||||||||||||||||| ||||                       
seq2  AACGAGGATTATAAAGTAATATGAATG-----------------------  274

seq1  CACATTTGTATAGCTATTTGTGCTTTCTCCCATTTTTTTTTTAACATCAA  349
                                                        
seq2  --------------------------------------------------  274

seq1  TCTGTATTTAAGTTGAGATACTAAAAGAATGTTCCCGAGGGACATTGCCC  399
                                                      ||
seq2  ------------------------------------------------CC  276

seq1  CACTGTAATTTTACAAATGTTTTTGTGATTGTACAAGGAATAGTTATATC  449
      || ||||| ||||| ||||  |||| |||||||| ||| |||||||||||
seq2  CATTGTAAATTTACTAATGCGTTTGCGATTGTACGAGGGATAGTTATATC  326

seq1  ATGTTAGGCATATTTATGATCTTGTTATTGTTTCATGTGGACATGAG--A  497
      ||||||||| ||||||  | ||||||||||||||||||| |||||||  |
seq2  ATGTTAGGCGTATTTACAACCTTGTTATTGTTTCATGTGAACATGAGATA  376

seq1  TATTTGTGTCAAATTGACAAGGGTTGGAT-TAGCTGGGCAGTGGTGGTGC  546
      |||||||||||||||||| |||| ||||| |||   |||  |  ||||| 
seq2  TATTTGTGTCAAATTGAC-AGGGGTGGATGTAG--TGGCTATCCTGGTG-  422

seq1  ATGCCTTTAATCCCAGCACATGGGAGGCAGAGGCAGGTGGATTTCTGAGT  596
             | | |  |  | || |||                    |||  
seq2  -------TCAACTGACAATATTGGA-------------------ATGAAC  446

seq1  TCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACA  646
      |  |  || |  ||  || || |||||                       
seq2  TACAATCCGGAATGAGCT-CACAGTGA-----------------------  472

seq1  CAGAGAAACCCTGTCTCGAAAAACCGAAAAAAACAAGAACAACAAAAACA  696
                                                        
seq2  --------------------------------------------------  472

seq1  AACAAACAAAAAAACAAACAAGACAAGGGTTGGATTGTAATGACTATTCC  746
                                                        
seq2  --------------------------------------------------  472

seq1  TGGTTGTCAACTTGACTATATCTGGAATGAACTACAATCCAGAATTGGAG  796
                                                        
seq2  --------------------------------------------------  472

seq1  GGCTCACATGTGA  809
                   
seq2  -------------  472