BAC Information

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BAC

Clone NameB6Ng01-121H01
Chromosome11 (Build37)
Map Location 118,214,518 - 118,375,737
singlet/doubletdoublet
Overlap geneTimp2, Lgals3bp, Cant1, C1qtnf1, D230014K01Rik, D11Bwg0517e
Upstream geneSept9, EG667423, Tnrc6c, Tmc6, Tmc8, 6030468B19Rik, Syngr2, Tk1, Afmid, Birc5, LOC546519, Tha1, Socs3, Pgs1, Dnahc17, Pscd1, Usp36, Ddc8
Downstream geneEnpp7, Cbx2, Cbx8, Cbx4, Tbc1d16, Ccdc40, Gaa, Eif4a3, Card14, Sgsh, Slc26a11, LOC672511, Rnf213, A730011L01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121H01.bB6Ng01-121H01.g
ACCDH925124DH925125
length1,1211,065
definitionDH925124|Mus musculus domesticus DNA, BAC clone: B6Ng01-121H01, 5' end.DH925125|Mus musculus domesticus DNA, BAC clone: B6Ng01-121H01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,374,605 - 118,375,737)(118,214,518 - 118,215,592)
sequence
gaattcttgctgatgtccccttgggggtctgcttcagtgtgaaatgctac
ctgtcctctcagatgatggacatctgtggccacacaactaggagcgaagg
cactgcctgcccagaggggacaatgcctcgtagactagtctcctcccttt
ccggctttgcctgcgtctggctctgcaggacagaagcctctcttgcagga
agggctcctggctgagctgcattcccgcctataatgagatctcctcacaa
gaacccaaaaagcatggggcggggccagacctgcaacttcaggtcccagg
ctccctggtgatgctaacaacactgaggacccaggcaccagctttgcaga
gtccctgctcggggtaggggtcagcaataatgggtgctcgttacctctct
gggcagcagactttcaagagggcaggaaggagtctgggagatctcagaga
ccttctgattgtagtgatcaacctgtcaaggggaacttgaagccaccctt
tctactaggaaacggaggctgggaccaccttgaaggaagggctggctggc
tggggaagaggcttggtggcaggggaacctggcgctccttgagtggatga
gtgtccatatccagggaatgctgctggttttcaatggacatcatatttca
atatttcagtgtattattgggatacacacccagtgatctgtccgtgttga
ctcatacagttcctcccgcgtctgcatagatgattggttttaaactctag
gtgagggaaccgtattctgaagctgtgtgctcatatctgacaagtggctc
acagccagaggtgcccccacttcagaccaggggctcccggtacctccgtt
ctgggcccatccctgcagctccgagctggggccttcttctcgggaggacc
tgggagatgccatggaaaagtagtgtgtggaaaccacacagcctcgagtg
gagagcggcctcccttgaagctctggaaggacagggttctaccagcgctt
tgctctctccactgcaggcatcagacgccacggctccactgagcgatggc
ccagccctaccccctgccagtacctctccgccttcagattgattcccagc
tgattggcccaccttccgcct
gaattctgaaccccaggaaccatgagacggtcagtccattgctttggggc
actcacttgtgaacatctgtcatagcagccacaggggacgctctgctatg
ggatagggcctctgtgctgggatgagttcgaagtcttggcttcatagtga
cctggcccaaggctttggacaccaatactgggaaagctaggcaaaagaga
tcagtgtacaagcagaaaagggcctccaggcattgacaagagcctcagac
ctctgatccagaccagaccagtatagttcccagcctggcacggccttggc
tgggcaaagacagcagagtctttctaagcacccccctccaacctgcagct
agcagtgtgggtatcccaagccagctctttcgcaccctgtggaccaggct
cccaaggcccgcatgctgcttttctctaaattcttcacaacttgctaggt
agacatgtggtcttgtgcccttgcactcccaaatgtgcctgcactcccaa
aggatgcccctggaggggaaacagtaaggatttcctcattggagggggtc
acttcctcaatcccatattttgctgaccaccacagagataaactgcaaaa
aggatctcatctcccccacccccttcagactgcgtttgcaaacttctcca
caggcatgcactatgtccgatgcccaagagggctgagtgaggtagctcca
cagataggatacggctaaaacgctccaaagagctaagcagggtgggacaa
ggagccacgaaaagggtaccaagaggacacttctgacacccggagaaaca
gaggaactgtggcttctgtctgtgtggaagaggggacacaggatactcag
aagagattgtaaaggcaaaccacggggacagccacgggctgggagccaca
gtctcacctgctgagtgcctgagtagcgcaggagaggcttcagggactca
actcaagtggagcttcacttctgcagcttttcaggacacataactatata
tgctccccctactagctcgattgtaccacctttggggttaggagttctta
ggttaacatatatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_118374605_118375737
seq2: B6Ng01-121H01.b_47_1167 (reverse)

seq1  AGGCGG-AGGTGGGGCATATTCAGCTGGGATTCCATTCTG-AGGCGGAGG  48
      |||||| ||||||| |  | |||||||||| | || |||| |||||||| 
seq2  AGGCGGAAGGTGGGCC--AATCAGCTGGGAAT-CAATCTGAAGGCGGAG-  46

seq1  AGGGTACTGGGCAGGGGGGTAGGGCTGGGCCATCGCTTCAGGTGGAGCCG  98
        |||||| |||| |||||||||||||||||||||| ||| |||||||||
seq2  -AGGTACT-GGCA-GGGGGTAGGGCTGGGCCATCGC-TCA-GTGGAGCCG  91

seq1  TGGCGTCCTGATTGCCCTGCAGTGGAGAGAGCAAAGCGCTGGTTAGAACC  148
      |||||| |||||   ||||||||||||||||||||||||||| ||||| |
seq2  TGGCGT-CTGAT--GCCTGCAGTGGAGAGAGCAAAGCGCTGG-TAGAA-C  136

seq1  CCTGTCCCTTCCAGAGCCTTCAAGGGAGGCCGCTCTTCCACTCGAGGCTG  198
      ||||| |||||||||| |||||||||||||||||| ||||||||||||||
seq2  CCTGT-CCTTCCAGAG-CTTCAAGGGAGGCCGCTC-TCCACTCGAGGCTG  183

seq1  TGTGGTTTCCACACACTAC-TTTCCATGGCATCTCCCAGGTCCTCCCCGA  247
      ||||||||||||||||||| |||||||||||||||||||||||| |||||
seq2  TGTGGTTTCCACACACTACTTTTCCATGGCATCTCCCAGGTCCT-CCCGA  232

seq1  GAAG-AGGCCCCAGCTCGGAGCTGCA-GGATGGG-CCAGAACGGAGGTAC  294
      |||| ||||||||||||||||||||| ||||||| |||||||||||||||
seq2  GAAGAAGGCCCCAGCTCGGAGCTGCAGGGATGGGCCCAGAACGGAGGTAC  282

seq1  CGGGAGCCCCTGGTCTGAAGTGGGGGCACCTCTGGCTGTGAGCCACTTGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAGCCCCTGGTCTGAAGTGGGGGCACCTCTGGCTGTGAGCCACTTGT  332

seq1  CAGATATGAGCACACAGCTTCAGAATACGGTTCCCTCACCTAGAGTTTAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATGAGCACACAGCTTCAGAATACGGTTCCCTCACCTAGAGTTTAA  382

seq1  AACCAATCATCTATGCAGACGCGGGAGGAACTGTATGAGTCAACACGGAC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATCATCTATGCAGACGCGGGAGGAACTGTATGAGTCAACACGGAC  432

seq1  AGATCACTGGGTGTGTATCCCAATAATACACTGAAATATTGAAATATGAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACTGGGTGTGTATCCCAATAATACACTGAAATATTGAAATATGAT  482

seq1  GTCCATTGAAAACCAGCAGCATTCCCTGGATATGGACACTCATCCACTCA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTGAAAACCAGCAGCATTCCCTGGATATGGACACTCATCCACTCA  532

seq1  AGGAGCGCCAGGTTCCCCTGCCACCAAGCCTCTTCCCCAGCCAGCCAGCC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCGCCAGGTTCCCCTGCCACCAAGCCTCTTCCCCAGCCAGCCAGCC  582

seq1  CTTCCTTCAAGGTGGTCCCAGCCTCCGTTTCCTAGTAGAAAGGGTGGCTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCAAGGTGGTCCCAGCCTCCGTTTCCTAGTAGAAAGGGTGGCTT  632

seq1  CAAGTTCCCCTTGACAGGTTGATCACTACAATCAGAAGGTCTCTGAGATC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCCCCTTGACAGGTTGATCACTACAATCAGAAGGTCTCTGAGATC  682

seq1  TCCCAGACTCCTTCCTGCCCTCTTGAAAGTCTGCTGCCCAGAGAGGTAAC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGACTCCTTCCTGCCCTCTTGAAAGTCTGCTGCCCAGAGAGGTAAC  732

seq1  GAGCACCCATTATTGCTGACCCCTACCCCGAGCAGGGACTCTGCAAAGCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACCCATTATTGCTGACCCCTACCCCGAGCAGGGACTCTGCAAAGCT  782

seq1  GGTGCCTGGGTCCTCAGTGTTGTTAGCATCACCAGGGAGCCTGGGACCTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCTGGGTCCTCAGTGTTGTTAGCATCACCAGGGAGCCTGGGACCTG  832

seq1  AAGTTGCAGGTCTGGCCCCGCCCCATGCTTTTTGGGTTCTTGTGAGGAGA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCAGGTCTGGCCCCGCCCCATGCTTTTTGGGTTCTTGTGAGGAGA  882

seq1  TCTCATTATAGGCGGGAATGCAGCTCAGCCAGGAGCCCTTCCTGCAAGAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTATAGGCGGGAATGCAGCTCAGCCAGGAGCCCTTCCTGCAAGAG  932

seq1  AGGCTTCTGTCCTGCAGAGCCAGACGCAGGCAAAGCCGGAAAGGGAGGAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCTGTCCTGCAGAGCCAGACGCAGGCAAAGCCGGAAAGGGAGGAG  982

seq1  ACTAGTCTACGAGGCATTGTCCCCTCTGGGCAGGCAGTGCCTTCGCTCCT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTCTACGAGGCATTGTCCCCTCTGGGCAGGCAGTGCCTTCGCTCCT  1032

seq1  AGTTGTGTGGCCACAGATGTCCATCATCTGAGAGGACAGGTAGCATTTCA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGTGGCCACAGATGTCCATCATCTGAGAGGACAGGTAGCATTTCA  1082

seq1  CACTGAAGCAGACCCCCAAGGGGACATCAGCAAGAATTC  1133
      |||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAGCAGACCCCCAAGGGGACATCAGCAAGAATTC  1121

seq1: chr11_118214518_118215592
seq2: B6Ng01-121H01.g_66_1130

seq1  GAATTCTGAACCCCAGGAACCATGAGACGGTCAGTCCATTGCTTTGGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAACCCCAGGAACCATGAGACGGTCAGTCCATTGCTTTGGGGC  50

seq1  ACTCACTTGTGAACATCTGTCATAGCAGCCACAGGGGACGCTCTGCTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTTGTGAACATCTGTCATAGCAGCCACAGGGGACGCTCTGCTATG  100

seq1  GGATAGGGCCTCTGTGCTGGGATGAGTTCGAAGTCTTGGCTTCATAGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGGGCCTCTGTGCTGGGATGAGTTCGAAGTCTTGGCTTCATAGTGA  150

seq1  CCTGGCCCAAGGCTTTGGACACCAATACTGGGAAAGCTAGGCAAAAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCCAAGGCTTTGGACACCAATACTGGGAAAGCTAGGCAAAAGAGA  200

seq1  TCAGTGTACAAGCAGAAAAGGGCCTCCAGGCATTGACAAGAGCCTCAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTACAAGCAGAAAAGGGCCTCCAGGCATTGACAAGAGCCTCAGAC  250

seq1  CTCTGATCCAGACCAGACCAGTATAGTTCCCAGCCTGGCACGGCCTTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATCCAGACCAGACCAGTATAGTTCCCAGCCTGGCACGGCCTTGGC  300

seq1  TGGGCAAAGACAGCAGAGTCTTTCTAAGCACCCCCCTCCAACCTGCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAAAGACAGCAGAGTCTTTCTAAGCACCCCCCTCCAACCTGCAGCT  350

seq1  AGCAGTGTGGGTATCCCAAGCCAGCTCTTTCGCACCCTGTGGACCAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGTGGGTATCCCAAGCCAGCTCTTTCGCACCCTGTGGACCAGGCT  400

seq1  CCCAAGGCCCGCATGCTGCTTTTCTCTAAATTCTTCACAACTTGCTAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGCCCGCATGCTGCTTTTCTCTAAATTCTTCACAACTTGCTAGGT  450

seq1  AGACATGTGGTCTTGTGCCCTTGCACTCCCAAATGTGCCTGCACTCCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGTGGTCTTGTGCCCTTGCACTCCCAAATGTGCCTGCACTCCCAA  500

seq1  AGGATGCCCCTGGAGGGGAAACAGTAAGGATTTCCTCATTGGAGGGGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCCCCTGGAGGGGAAACAGTAAGGATTTCCTCATTGGAGGGGGTC  550

seq1  ACTTCCTCAATCCCATATTTTGCTGACCACCACAGAGATAAACTGCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTCAATCCCATATTTTGCTGACCACCACAGAGATAAACTGCAAAA  600

seq1  AGGATCTCATCTCCCCCACCCCCTTCAGACTGCGTTTGCAAACTTCTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTCATCTCCCCCACCCCCTTCAGACTGCGTTTGCAAACTTCTCCA  650

seq1  CAGGCATGCACTATGTCCGATGCCCAAGAGGGCTGAGTGAGGTAGCTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGCACTATGTCCGATGCCCAAGAGGGCTGAGTGAGGTAGCTCCA  700

seq1  CAGATAGGATACGGCTAAAACGCTCCAAAGAGCTAAGCAGGGTGGGACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGGATACGGCTAAAACGCTCCAAAGAGCTAAGCAGGGTGGGACAA  750

seq1  GGAGCCACGAAAAGGGTACCAAGAGGACACTTCTGACACCCGGAGAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCACGAAAAGGGTACCAAGAGGACACTTCTGACACCCGGAGAAACA  800

seq1  GAGGAACTGTGGCTTCTGTCTGTGTGGAAGAGGGGACACAGGATACTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACTGTGGCTTCTGTCTGTGTGGAAGAGGGGACACAGGATACTCAG  850

seq1  AAGAGATGTAAAAGGCAAACCACGGGGACAGCCACGGGCTGGGAGCCACA  900
      |||||||   ||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATTGTAAAGGCAAACCACGGGGACAGCCACGGGCTGGGAGCCACA  900

seq1  GTCTCACCTGCTGAGTGCCTGAGTAGCGCAGGAGAGGCCTTCAGGGACTC  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTCTCACCTGCTGAGTGCCTGAGTAGCGCAGGAGAGG-CTTCAGGGACTC  949

seq1  AACTCCAAGTGGAGCCTTCCACTTCTGCCAGCTTTTCCAGGACCACATAA  1000
      |||| ||||||||||  | |||||||| |||||||| ||||| |||||||
seq2  AACT-CAAGTGGAGC--TTCACTTCTG-CAGCTTTT-CAGGA-CACATAA  993

seq1  CTATATATGCTCCCCCTACCTAGCTCGATTGTACCCACCCTTTGGGTTAA  1050
      |||||||||||||||||| ||||||||||||||||   |||||||| | |
seq2  CTATATATGCTCCCCCTA-CTAGCTCGATTGTACC--ACCTTTGGGGTTA  1040

seq1  GGAGTCCTAAGGGTAACATATATGC  1075
      ||||| || ||| ||||||||||||
seq2  GGAGTTCTTAGGTTAACATATATGC  1065