BAC Information

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BAC

Clone NameB6Ng01-122H15
Chromosome11 (Build37)
Map Location 92,733,079 - 92,846,489
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC382545
Downstream geneLOC100039286, Car10, LOC629636, Utp18, Mbtd1, Nme2, Nme1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122H15.bB6Ng01-122H15.g
ACCDH925889DH925890
length1,166975
definitionDH925889|Mus musculus domesticus DNA, BAC clone: B6Ng01-122H15, 5' end.DH925890|Mus musculus domesticus DNA, BAC clone: B6Ng01-122H15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,733,079 - 92,734,247)(92,845,506 - 92,846,489)
sequence
gaattcacatgcaatgcctaacttcagcgttgcagaatatcaagagatgg
tgggtgttcagggataagcaaatgtttgtgtaatccaagtgtgaagtggt
ggtgctggcaagagttgccacaatgaaatttcacagacatctttaaagga
gggcatatgttgtatggtacaagcaaacccaagaaataatttccatctat
acctttaaaagatacctttttaaatgtctgtatgcacatgtgtgtgcatg
cttttgtgtgtggcagtgtcaagcacatgaacatgtgtgcatatgtgtgg
aaattagagaaaaactttgagtatcatcacagtcctttgagatatggttt
atcatttgcaacgagttcacaaattactccagtttcgttaggcagctatg
aaaagtcttcatctactctgcactgtagtaacaagcatataccatcatgt
ttatttcacataggttctgagaattaaaaaggtttttattggccaatcca
tcccttatctctactatacttataaataaataaatacatacatacataca
tacatacatacatacataaatggaacagaaagcagttttggttacaagta
aggagaaagggaaagttatttttaatatatgcagattttcaggtcaggga
gattaaaaaaaaagatctgaagtctgaagtctgctctacaacaatgtaaa
tatacttagcagtggaataatgtttatttttaaaagtttgagatagtaat
ttttataatgtgggcttaaaaatatatgtcaggctaccaggatggctgag
tgggtaaaggagtttgtcaccagaactgattatccaaacttaacttcaca
tggctaaaggacaaaaccaatttccaaaatttttcctctaacctccacac
aagtgccatggcatatgcatacatgcacacatcctataaatatatttaat
aaaatttttaacgaaattatgtaacccaggctcatttgcctcacttctat
atcaaatcatgagagtaatagtaattaaaaacaaatgccatttcttaatt
acacttcgctatgtaggaatgaattgtacttccaaacaactgattaggtc
aaactaatcttctattatgaatcacaagtagaatatatttgtttcagatg
atttgaaaaataaata
gaattctctttgagcatgacttctgcagtctagctagaatgactcatttc
aaagcactctttggccattcattcactgctcagatttctcagaaagcaat
tcagttatttgtgtggagaataatggaaaggaagctgtgcttaagagtca
acatcttcaatatttattaaggtgtagcttcatcaggtacatgcctgtta
tggattaggtatgaatagtgcaccctacctagatatacattaaggacttg
atccccaggtgagtcctgttgggaaatattgttgatctttaagagatgat
atctaagctggggacatagcttagcaggaagaatgtttacttagcattca
gattgccctgggtccattccacaacactgcataattcaggcatgggtgat
gtatacctgtaattccagagaagtaaaagaagaaacagaagttcaaaatt
atccttggctgtgtgacgaatgcaatacaagccagcaaaggattcatggg
actctgattcaaaaaaaaagaaagaaagagagagagagagagagagagag
agagagagagagagagagagagagagagagagagagaaaagaaaagaaga
gaagagaagagaagagaagagaagagaagagaagagaaaagaaagaaaag
aaaagagagaagagaaaagaaaagaaaagagtggagcttgggtctaatgg
gaagtccttaagtaggtgaaggcataacccaaagaatactgaggaagctt
tcctgtcctgtctctctctacttcctggcttgctgtaacgccaacacacc
atgatacgccacccctatagcaatgacccgtgaaattttccactggatag
actctacagatatgcaaatccaaagaaaactatattcctttttaaatgat
tattaatatattgattacatccagccttggcctcctctctagttccactc
ctcacagagttcattaacccatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_92733079_92734247
seq2: B6Ng01-122H15.b_44_1209

seq1  GAATTCACATGCAATGCCTAACTTCAGCGTTGCAGAATATCAAGAGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGCAATGCCTAACTTCAGCGTTGCAGAATATCAAGAGATGG  50

seq1  TGGGTGTTCAGGGATAAGCAAATGTTTGTGTAATCCAAGTGTGAAGTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTTCAGGGATAAGCAAATGTTTGTGTAATCCAAGTGTGAAGTGGT  100

seq1  GGTGCTGGCAAGAGTTGCCACAATGAAATTTCACAGACATCTTTAAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGGCAAGAGTTGCCACAATGAAATTTCACAGACATCTTTAAAGGA  150

seq1  GGGCATATGTTGTATGGTACAAGCAAACCCAAGAAATAATTTCCATCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATATGTTGTATGGTACAAGCAAACCCAAGAAATAATTTCCATCTAT  200

seq1  ACCTTTAAAAGATACCTTTTTAAATGTCTGTATGCACATGTGTGTGCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTAAAAGATACCTTTTTAAATGTCTGTATGCACATGTGTGTGCATG  250

seq1  CTTTTGTGTGTGGCAGTGTCAAGCACATGAACATGTGTGCATATGTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTGTGTGGCAGTGTCAAGCACATGAACATGTGTGCATATGTGTGG  300

seq1  AAATTAGAGAAAAACTTTGAGTATCATCACAGTCCTTTGAGATATGGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGAGAAAAACTTTGAGTATCATCACAGTCCTTTGAGATATGGTTT  350

seq1  ATCATTTGCAACGAGTTCACAAATTACTCCAGTTTCGTTAGGCAGCTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTGCAACGAGTTCACAAATTACTCCAGTTTCGTTAGGCAGCTATG  400

seq1  AAAAGTCTTCATCTACTCTGCACTGTAGTAACAAGCATATACCATCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCTTCATCTACTCTGCACTGTAGTAACAAGCATATACCATCATGT  450

seq1  TTATTTCACATAGGTTCTGAGAATTAAAAAGGTTTTTATTGGCCAATCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCACATAGGTTCTGAGAATTAAAAAGGTTTTTATTGGCCAATCCA  500

seq1  TCCCTTATCTCTACTATACTTATAAATAAATAAATACATACATACATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTATCTCTACTATACTTATAAATAAATAAATACATACATACATACA  550

seq1  TACATACATACATACATAAATGGAACAGAAAGCAGTTTTGGTTACAAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACATACATACATAAATGGAACAGAAAGCAGTTTTGGTTACAAGTA  600

seq1  AGGAGAAAGGGAAAGTTATTTTTAATATATGCAGATTTTCAGGTCAGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAAGGGAAAGTTATTTTTAATATATGCAGATTTTCAGGTCAGGGA  650

seq1  GATTAAAAAAAAAGATCTGAAGTCTGAAGTCTGCTCTACAACAATGTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAAAAAAAGATCTGAAGTCTGAAGTCTGCTCTACAACAATGTAAA  700

seq1  TATACTTAGCAGTGGAATAATGTTTATTTTTAAAAGTTTGAGATAGTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTAGCAGTGGAATAATGTTTATTTTTAAAAGTTTGAGATAGTAAT  750

seq1  TTTTATAATGTGGGCTTAAAAATATATGTCAGGCTACCAGGATGGCTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAATGTGGGCTTAAAAATATATGTCAGGCTACCAGGATGGCTGAG  800

seq1  TGGGTAAAGGAGTTTGTCACCAGAACTGATTATCCAAACTTAACTTCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAAAGGAGTTTGTCACCAGAACTGATTATCCAAACTTAACTTCACA  850

seq1  TGGCTAAAGGACAAAACCAATTTCCAAAATTTTTCCTCTAACCTCCACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAAAGGACAAAACCAATTTCCAAAATTTTTCCTCTAACCTCCACAC  900

seq1  AAGTGCCATGGCATATGCATACATGCACACATCCTATAAATATATTTAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCCATGGCATATGCATACATGCACACATCCTATAAATATATTTAAT  950

seq1  AAAATTTTTAACGAAATTATGTAACCCAGGCTCATTTGCCTCACTTCTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTTAACGAAATTATGTAACCCAGGCTCATTTGCCTCACTTCTAT  1000

seq1  ATCAAATCATGAGAGTAATAGTAATTAAAAAACAAATGCCATTTCTTAAT  1050
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATCAAATCATGAGAGTAATAGTAATT-AAAAACAAATGCCATTTCTTAAT  1049

seq1  TACACTTCGCTATGTAGGAAAATG-ATTGTACTGCCAAACACACTGATTA  1099
      ||||||||||||||||||  |||| |||||||| ||||||| ||||||| 
seq2  TACACTTCGCTATGTAGG--AATGAATTGTACTTCCAAACA-ACTGATT-  1095

seq1  AGGTCAAACTAATC-TCTATTATGAATCACAAGTAGAAT-TATTTGTTTC  1147
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  AGGTCAAACTAATCTTCTATTATGAATCACAAGTAGAATATATTTGTTTC  1145

seq1  AGTATGATTTGAAAAATAAATA  1169
      || |||||||||||||||||||
seq2  AG-ATGATTTGAAAAATAAATA  1166

seq1: chr11_92845506_92846489
seq2: B6Ng01-122H15.g_69_1043 (reverse)

seq1  AAAATGGGATAATGAACTCTGTGA-GAGTGGGACGTAGGAGAGGAGGGCA  49
      |||||||| ||||||||||||||| |||||| || || ||||||||| ||
seq2  AAAATGGGTTAATGAACTCTGTGAGGAGTGGAAC-TA-GAGAGGAGGCCA  48

seq1  ATGGCTGGATTGTAAATAAATATAATAATAATAATTTTAAAAAGAAATAT  99
      | ||||||| ||| ||| |||||| ||||||| | ||||||||| |||||
seq2  A-GGCTGGA-TGT-AATCAATATATTAATAATCA-TTTAAAAAGGAATAT  94

seq1  TGTTTTCTTT-GATTTGCATATCTGTAGAGTCTAATCCAGGTAGGAAAAT  148
       ||||||||| |||||||||||||||||||||| ||||||   |||||||
seq2  AGTTTTCTTTGGATTTGCATATCTGTAGAGTCT-ATCCAG--TGGAAAAT  141

seq1  TTCACTGGGTCATTGCTATA-GGGTGGCGTATCATGGTGGTGGTGGGCGT  197
      ||||| |||||||||||||| ||||||||||||||||||   || |||||
seq2  TTCAC-GGGTCATTGCTATAGGGGTGGCGTATCATGGTG--TGTTGGCGT  188

seq1  TACAGCAAGCCAGGAAGTAGAGAGAGACAGGACAGGAAAGCTTCCTCAGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAAGCCAGGAAGTAGAGAGAGACAGGACAGGAAAGCTTCCTCAGT  238

seq1  ATTCTTTGGGTTATGCCTTCACCTACTTAAGGACTTCCCATTAGACCCAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTGGGTTATGCCTTCACCTACTTAAGGACTTCCCATTAGACCCAA  288

seq1  GCTCCACTCTTTTCTTTTCTTTTCTCTTCTCTTCTTTTCTTTTCTTTTCT  347
      ||||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  GCTCCACTCTTTTCTTTTCTTTTCTCTTCTC-TCTTTTCTTTTC-TTTCT  336

seq1  TTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTTTTCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTTTTCT  386

seq1  TT--TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  445
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  436

seq1  TCTCTCTCTCTCTTTCTTTCTTTTTTTTTGAATCAGAGTCCCATGAATCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTTTCTTTCTTTTTTTTTGAATCAGAGTCCCATGAATCC  486

seq1  TTTGCTGGCTTGTATTGCATTCGTCACACAGCCAAGGATAATTTTGAACT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGGCTTGTATTGCATTCGTCACACAGCCAAGGATAATTTTGAACT  536

seq1  TCTGTTTCTTCTTTTACTTCTCTGGAATTACAGGTATACATCACCCATGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCTTCTTTTACTTCTCTGGAATTACAGGTATACATCACCCATGC  586

seq1  CTGAATTATGCAGTGTTGTGGAATGGACCCAGGGCAATCTGAATGCTAAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTATGCAGTGTTGTGGAATGGACCCAGGGCAATCTGAATGCTAAG  636

seq1  TAAACATTCTTCCTGCTAAGCTATGTCCCCAGCTTAGATATCATCTCTTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATTCTTCCTGCTAAGCTATGTCCCCAGCTTAGATATCATCTCTTA  686

seq1  AAGATCAACAATATTTCCCAACAGGACTCACCTGGGGATCAAGTCCTTAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCAACAATATTTCCCAACAGGACTCACCTGGGGATCAAGTCCTTAA  736

seq1  TGTATATCTAGGTAGGGTGCACTATTCATACCTAATCCATAACAGGCATG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATCTAGGTAGGGTGCACTATTCATACCTAATCCATAACAGGCATG  786

seq1  TACCTGATGAAGCTACACCTTAATAAATATTGAAGATGTTGACTCTTAAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGATGAAGCTACACCTTAATAAATATTGAAGATGTTGACTCTTAAG  836

seq1  CACAGCTTCCTTTCCATTATTCTCCACACAAATAACTGAATTGCTTTCTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTTCCTTTCCATTATTCTCCACACAAATAACTGAATTGCTTTCTG  886

seq1  AGAAATCTGAGCAGTGAATGAATGGCCAAAGAGTGCTTTGAAATGAGTCA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTGAGCAGTGAATGAATGGCCAAAGAGTGCTTTGAAATGAGTCA  936

seq1  TTCTAGCTAGACTGCAGAAGTCATGCTCAAAAAGAATTC  984
      ||||||||||||||||||||||||||||||| |||||||
seq2  TTCTAGCTAGACTGCAGAAGTCATGCTCAAAGAGAATTC  975