BAC Information

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BAC

Clone NameB6Ng01-124B15
Chromosome11 (Build37)
Map Location 62,837,650 - 62,983,250
singlet/doubletdoublet
Overlap geneTekt3, Pmp22
Upstream geneSpecc1, Adora2b, 2410012H22Rik, Ttc19, Ncor1, Pigl, Prr6, Ubb, Trpv2, 2410006H16Rik, BC046404, BC025076, Zfp287, LOC626482, LOC100042766, Zfp286, Trim16, Fbxw10, Fam18b, Cdrt4
Downstream geneLOC433423, LOC100042799, LOC100041690, LOC654442, LOC668297, Hs3st3b1, Cox10, 2810001G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124B15.bB6Ng01-124B15.g
ACCDH927095DH927096
length1,0661,064
definitionDH927095|Mus musculus domesticus DNA, BAC clone: B6Ng01-124B15, 5' end.DH927096|Mus musculus domesticus DNA, BAC clone: B6Ng01-124B15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,837,650 - 62,838,726)(62,982,186 - 62,983,250)
sequence
gaattcttgtggggggaatcttaattacaaagcaaactggactttaaatg
gaaacacacattcttttaagcaatttctggaatgttatcagtcttcaacc
atccacaatcttggacttactgttcactgtgagggggaccacccaggaag
gcagccaggcagaccactggataatctcagtcctgtagtcttgctgccct
gccttgtcctggctcctccctaaggctggacccagcacttcagccctatc
atctgagaagtgcagggctaaccattggcgccttgcagggagcaagggct
cagcaaatgctagctgttatctttaataattacgattggtgcctgggtga
accaacctttgaccatgaagtggcctgagagttcagagctggtcctatgg
gctctgggggtgggcagagaatgctgctgctggatttctcattttcagcc
ctcttcaatccaatttcaaggcatgccttcctgaaacagagatatttctt
ttgcctggaatctaaagggagatccatagcatcccactgatggcattgga
tgcctcttctgtttgaatttattgttttatgtctcttctactggctttgg
tataaaatatatgcactaacttagtaatttttaaaggacagttcagtggc
atggaatacattcagattatacaatcaggtcccacctgagcgcctaaaca
gtgcctactgtctcattgactgaagaactactatccagcttgttattctg
gggctctgagaaacttagaaaccaaccttcaatcagatgtgacaacttgt
ctcctgacatctggtccccaagctttttttcttctcagtctgactccccc
acccaacccacattcatactgcagggagaccccaggccatgtctaggctg
tggaagccctcagcctctgggtagcagctatttgcactccctgctcagct
agtgggcacattcagaaggtgctttgctatttcataggaagttacaggaa
cttgtaagataccagagcgaaatgccctggtgtttgtaggcagaaagatc
taagtcgatctaacag
gaattcagatgcttaaacaggacacagatgaggagacaaggatttgagaa
agcactggggtaccagcgtctgcttgataactactcagcaccagatccta
tcaaaccttcaagaaaaccagccgtactcactgcccccagctgccccttc
gtttatatctctatctgtcttcaaaatggaaagtcctgtgcgaagcccca
tttacctaaaaactatgctgaaaatatggatgagaaacagaaaacaaagc
aagaacgaaccaaaacaaaacctcgctttaaatcatgagggcagaaagag
gggaagatgaaggcctccaggacatgaggtccagccaatcagaaaacaaa
gaaacaaaaaaacccaaaccccactaaacaatagttagcccaattgtttc
ttctgatatctcctacaggaatttttttagtctgtgaacagcagacaatg
ctgcaaataagctatgctgaaatgcagaaaagctaagcaaagaattaagc
cacacacacacacatccttggaggaaaaagagaaaagaggtaaacaaatt
tcaacgcttctagataggaagtgtgctctcaacagctgggtgtgctcgcc
attctgtggactgttgctcccagaatcccaagcacagtggaatgcagcca
ctaaaagggcagtttctaatcaaagctgccctgctgtaaattcctaaggt
caaaggaattctccgaaatgctcaggacggaaagaaaatgtcataaagca
atcccctgagaggacccaagattctgttgctaaagaaatgttaactgttc
atctccactgttctgtttgaacttccctactgctgttttcaggagaaaga
agaatgtcttccctttaaaaaacaaaataaacagagagctggagagacgg
ctccgtggtcaagagtacttgaggcacttgcagagatccaagtttgcttt
cagcaacagatcaggtggctcacaacgacgctgtcattcagctcaaggga
tcaacacccctcttctgggcctctgtgggcactgcacagggtgtgcagga
ctcccacactcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_62837650_62838726
seq2: B6Ng01-124B15.b_45_1110

seq1  GAATTCTTGTGGGGGGAATCTTAATTACAAAGCAAACTGGACTTTAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTGGGGGGAATCTTAATTACAAAGCAAACTGGACTTTAAATG  50

seq1  GAAACACACATTCTTTTAAGCAATTTCTGGAATGTTATCAGTCTTCAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACACATTCTTTTAAGCAATTTCTGGAATGTTATCAGTCTTCAACC  100

seq1  ATCCACAATCTTGGACTTACTGTTCACTGTGAGGGGGACCACCCAGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACAATCTTGGACTTACTGTTCACTGTGAGGGGGACCACCCAGGAAG  150

seq1  GCAGCCAGGCAGACCACTGGATAATCTCAGTCCTGTAGTCTTGCTGCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCAGGCAGACCACTGGATAATCTCAGTCCTGTAGTCTTGCTGCCCT  200

seq1  GCCTTGTCCTGGCTCCTCCCTAAGGCTGGACCCAGCACTTCAGCCCTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTCCTGGCTCCTCCCTAAGGCTGGACCCAGCACTTCAGCCCTATC  250

seq1  ATCTGAGAAGTGCAGGGCTAACCATTGGCGCCTTGCAGGGAGCAAGGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGAAGTGCAGGGCTAACCATTGGCGCCTTGCAGGGAGCAAGGGCT  300

seq1  CAGCAAATGCTAGCTGTTATCTTTAATAATTACGATTGGTGCCTGGGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAATGCTAGCTGTTATCTTTAATAATTACGATTGGTGCCTGGGTGA  350

seq1  ACCAACCTTTGACCATGAAGTGGCCTGAGAGTTCAGAGCTGGTCCTATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCTTTGACCATGAAGTGGCCTGAGAGTTCAGAGCTGGTCCTATGG  400

seq1  GCTCTGGGGGTGGGCAGAGAATGCTGCTGCTGGATTTCTCATTTTCAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGGGGTGGGCAGAGAATGCTGCTGCTGGATTTCTCATTTTCAGCC  450

seq1  CTCTTCAATCCAATTTCAAGGCATGCCTTCCTGAAACAGAGATATTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAATCCAATTTCAAGGCATGCCTTCCTGAAACAGAGATATTTCTT  500

seq1  TTGCCTGGAATCTAAAGGGAGATCCATAGCATCCCACTGATGGCATTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGGAATCTAAAGGGAGATCCATAGCATCCCACTGATGGCATTGGA  550

seq1  TGCCTCTTCTGTTTGAATTTATTGTTTTATGTCTCTTCTACTGGCTTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTTCTGTTTGAATTTATTGTTTTATGTCTCTTCTACTGGCTTTGG  600

seq1  TATAAAATATATGCACTAACTTAGTAATTTTTAAAGGACAGTTCAGTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATATATGCACTAACTTAGTAATTTTTAAAGGACAGTTCAGTGGC  650

seq1  ATGGAATACATTCAGATTATACAATCAGGTCCCACCTGAGCGCCTAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATACATTCAGATTATACAATCAGGTCCCACCTGAGCGCCTAAACA  700

seq1  GTGCCTACTGTCTCATTGACTGAAGAACTACTATCCAGCTTGTTATTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTACTGTCTCATTGACTGAAGAACTACTATCCAGCTTGTTATTCTG  750

seq1  GGGCTCTGAGAAACTTAGAAACCAACCTTCAATCAGATGTGACAACTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCTGAGAAACTTAGAAACCAACCTTCAATCAGATGTGACAACTTGT  800

seq1  CTCCTGACATCTGGTCCCCAAGC-TTTTTTCTTCTCAGTCTGACTCCCCC  849
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTCCTGACATCTGGTCCCCAAGCTTTTTTTCTTCTCAGTCTGACTCCCCC  850

seq1  ACCCAACCCACATTCATACTGCAGGGAGACCCCAGGCCATGTCTAGGCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACCCACATTCATACTGCAGGGAGACCCCAGGCCATGTCTAGGCTG  900

seq1  TGGAAGCCCTCAGCCTCTGGGTAGCAGCTATTTTGCACTCCCTGCTCAGC  949
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGGAAGCCCTCAGCCTCTGGGTAGCAGCTA-TTTGCACTCCCTGCTCAGC  949

seq1  TTAGGTGGGCACATTCAAGAAGGTGCTTTGCTATTTCATAGGAAAGTTTA  999
      |   |||||||||||| |||||||||||||||||||||||||||   |||
seq2  T--AGTGGGCACATTC-AGAAGGTGCTTTGCTATTTCATAGGAA--GTTA  994

seq1  CAGGACCTTGTAAAGATTACCAGGAGCAGAAATGCCCCTGGTG-TTGTAG  1048
      ||||| ||||| |||| ||||| |||| |||||| |||||||| ||||||
seq2  CAGGAACTTGT-AAGA-TACCA-GAGC-GAAATG-CCCTGGTGTTTGTAG  1039

seq1  GCAGACAGATCTAAGGTCAGATCTAACAG  1077
      ||||| |||||||| ||| ||||||||||
seq2  GCAGAAAGATCTAA-GTC-GATCTAACAG  1066

seq1: chr11_62982186_62983250
seq2: B6Ng01-124B15.g_68_1131 (reverse)

seq1  TCTGGGTGT-GGAGTCCTGCACA-CCTGTGCAGTGCCCACAGAGG-CCAG  47
      |||| |||| ||||||||||||| ||||||||||||||||||||| ||||
seq2  TCTGAGTGTGGGAGTCCTGCACACCCTGTGCAGTGCCCACAGAGGCCCAG  50

seq1  GAGA-GGGTGTTGGATCCCTTGGAGCTGGAATGACAGGCGTCGTTGTGAG  96
       ||| ||||||| |||||||| ||||| |||||||| |||||||||||||
seq2  AAGAGGGGTGTT-GATCCCTT-GAGCT-GAATGACA-GCGTCGTTGTGAG  96

seq1  CCACCTGATTCTGGTGCTGGAAAGCAAACTTGGATCTTCTGCAAGTGCCT  146
      |||||||| |||| |||| ||||||||||||||||| |||||||||||||
seq2  CCACCTGA-TCTGTTGCT-GAAAGCAAACTTGGATC-TCTGCAAGTGCCT  143

seq1  CAAGTACTCTTGACCACGGAGCCGTCTCTCCAGCTCTCTGTTTATTTTGT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTACTCTTGACCACGGAGCCGTCTCTCCAGCTCTCTGTTTATTTTGT  193

seq1  TTTTT-AAGGGAAGACATTCTTCTTTCTCCTG-AAACAGCAGTAGGGAAG  244
      ||||| |||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTTAAAGGGAAGACATTCTTCTTTCTCCTGAAAACAGCAGTAGGGAAG  243

seq1  TTCAAACAGAACAGTGGAGATGAACAGTTAACATTTCTTTAGCAACAGAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAGAACAGTGGAGATGAACAGTTAACATTTCTTTAGCAACAGAA  293

seq1  TCTTGGGTCCTCTCAGGGGATTGCTTTATGACATTTTCTTTCCGTCCTGA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGTCCTCTCAGGGGATTGCTTTATGACATTTTCTTTCCGTCCTGA  343

seq1  GCATTTCGGAGAATTCCTTTGACCTTAGGAATTTACAGCAGGGCAGCTTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCGGAGAATTCCTTTGACCTTAGGAATTTACAGCAGGGCAGCTTT  393

seq1  GATTAGAAACTGCCCTTTTAGTGGCTGCATTCCACTGTGCTTGGGATTCT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGAAACTGCCCTTTTAGTGGCTGCATTCCACTGTGCTTGGGATTCT  443

seq1  GGGAGCAACAGTCCACAGAATGGCGAGCACACCCAGCTGTTGAGAGCACA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCAACAGTCCACAGAATGGCGAGCACACCCAGCTGTTGAGAGCACA  493

seq1  CTTCCTATCTAGAAGCGTTGAAATTTGTTTACCTCTTTTCTCTTTTTCCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTATCTAGAAGCGTTGAAATTTGTTTACCTCTTTTCTCTTTTTCCT  543

seq1  CCAAGGATGTGTGTGTGTGTGGCTTAATTCTTTGCTTAGCTTTTCTGCAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGATGTGTGTGTGTGTGGCTTAATTCTTTGCTTAGCTTTTCTGCAT  593

seq1  TTCAGCATAGCTTATTTGCAGCATTGTCTGCTGTTCACAGACTAAAAAAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATAGCTTATTTGCAGCATTGTCTGCTGTTCACAGACTAAAAAAA  643

seq1  TTCCTGTAGGAGATATCAGAAGAAACAATTGGGCTAACTATTGTTTAGTG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTAGGAGATATCAGAAGAAACAATTGGGCTAACTATTGTTTAGTG  693

seq1  GGGTTTGGGTTTTTTTGTTTCTTTGTTTTCTGATTGGCTGGACCTCATGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGGGTTTTTTTGTTTCTTTGTTTTCTGATTGGCTGGACCTCATGT  743

seq1  CCTGGAGGCCTTCATCTTCCCCTCTTTCTGCCCTCATGATTTAAAGCGAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGGCCTTCATCTTCCCCTCTTTCTGCCCTCATGATTTAAAGCGAG  793

seq1  GTTTTGTTTTGGTTCGTTCTTGCTTTGTTTTCTGTTTCTCATCCATATTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTGGTTCGTTCTTGCTTTGTTTTCTGTTTCTCATCCATATTT  843

seq1  TCAGCATAGTTTTTAGGTAAATGGGGCTTCGCACAGGACTTTCCATTTTG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATAGTTTTTAGGTAAATGGGGCTTCGCACAGGACTTTCCATTTTG  893

seq1  AAGACAGATAGAGATATAAACGAAGGGGCAGCTGGGGGCAGTGAGTACGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGATAGAGATATAAACGAAGGGGCAGCTGGGGGCAGTGAGTACGG  943

seq1  CTGGTTTTCTTGAAGGTTTGATAGGATCTGGTGCTGAGTAGTTATCAAGC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTTCTTGAAGGTTTGATAGGATCTGGTGCTGAGTAGTTATCAAGC  993

seq1  AGACGCTGGTACCCCAGTGCTTTCTCAAATCCTTGTCTCCTCATCTGTGT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGCTGGTACCCCAGTGCTTTCTCAAATCCTTGTCTCCTCATCTGTGT  1043

seq1  CCTGTTTAAGCATCTGAATTC  1065
      |||||||||||||||||||||
seq2  CCTGTTTAAGCATCTGAATTC  1064