BAC Information

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BAC

Clone NameB6Ng01-124G24
Chromosome11 (Build37)
Map Location 63,603,061 - 63,604,145
singlet/doubletsinglet
Overlap genenone
Upstream geneTrim16, Fbxw10, Fam18b, Cdrt4, Tekt3, Pmp22, LOC433423, LOC100042799
Downstream geneLOC100041690, LOC654442, LOC668297, Hs3st3b1, Cox10, 2810001G20Rik, EG544785, Hs3st3a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124G24.bB6Ng01-124G24.g
ACCDH927346DH927347
length1,0821,158
definitionDH927346|Mus musculus domesticus DNA, BAC clone: B6Ng01-124G24, 5' end.DH927347|Mus musculus domesticus DNA, BAC clone: B6Ng01-124G24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttcacggaaccgtcactgtttatattcatgcgattatatctt
aaaattagtgtttgcttctaacttgttcagtcgcttcagatcttgaaaac
tttagagtgacgcctcccccttccccttttttctttcccattgttctttg
actgaaaagcaaagcaaaagaaaagaagaacaacacagaagaacttccct
agggcaaaggagtttatattaggtcatttctaaaaaccttaaattatcct
taccaaagtcaaggaccttccataggatctgaccagaaggcaacagggtt
actataacttcctgtaaaatgagacatgctgaatcaaggtttttatgttg
gacttgtaaaaaaaaaaaaattacactgttcgaaatgaatcaagtccaaa
gtctgttagactcaaaaatgaagaatgtaaggaaagaagttatagtattt
gcacgagcttgttgatatcaggtctgtcacaatgccaagatgttttcagt
cctccgctgggggactgtttatcaaactcacaaagattgtctgcacaaga
gcccagaaaactccaccctggatcgactcctatcaaggcatctgaggctt
agtcaccagcgttcctctcagagcatcatccccaagcacaaagggaaaac
ctctaatagccaagcttccttcttaataatccaatttggatcaattgacc
ataacatcatccagagcgcgctgtaacccagtaatgctcagctcatgcag
gctcccaggataatgaagtccatatggctggaggtgactgagtccacctt
gctatgtttagaggaattcaaactcctgctattctggcagggcaggtgtc
ttttggcctttaactaccctccagggacaagcgcctgggttccctgcata
ctgtacacttccttcagtattcttttgtcaccaagcagagcttcctcagc
tgggcagagcctcacttctctctgagtcgctgacactgaacagaaggcct
ggttgcatttctgtaacactatggaagcatcgctctggacctgaggaaac
agatcagaaggcacaggtgtgcatcaagcttt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
ggaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgggacactatgcccctccttagaagtggga
acaaaacacccatgggaaggagtttacagaaacaaagtttggaggtgaga
tgaaaggatggaccatgtagagactgccatatccagggatccaccccata
atcagcatccaaacgctgacaccattgcatatactagcaagattttatcg
aaaggacccagatgtagctgtctcttgtgagactatgccggggccctagc
aaacacagaagtggatgctcacagtcagctaatggatggatcacaggcct
cccaatgaggagctagagaaagtacccaaggagctaaagggatctgcacc
tatagttgaaccacttatgacttaccagtcccctgagcctcttgactcta
gctgcaaatgtttcaaagatgccctagtcggcctcctgagaagtccattg
gaaccaaacttgtgctcagtacaggggacagccaggcaaaagaggggagg
ggggctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_63603061_63604145
seq2: B6Ng01-124G24.b_42_1123 (reverse)

seq1  AAAGCTTGGTGCACACCCTGTGCCCTTCTGTACTGTTTCCTCTGGGTCCA  50
      |||||||| |||||| |||||| |||||||  ||||||||||  ||||||
seq2  AAAGCTTGATGCACA-CCTGTG-CCTTCTGATCTGTTTCCTC-AGGTCCA  47

seq1  GAGCGATGCTTCCATAGTG-TACAGAAATGCAACCAGGCC-TCTGTTCAG  98
      ||||||||||||||||||| |||||||||||||||||||| |||||||||
seq2  GAGCGATGCTTCCATAGTGTTACAGAAATGCAACCAGGCCTTCTGTTCAG  97

seq1  TTGTTCAGCGACTCAGAGAGGAGTGAGGCTTCTGCCCAGCTGGGGAAGCT  148
      |   |||||||||||||||| |||||||| |||||||||||| |||||||
seq2  T--GTCAGCGACTCAGAGAGAAGTGAGGC-TCTGCCCAGCTGAGGAAGCT  144

seq1  CTGCTTGGTGAC-AAAGAATACTGGAGGAAGTGTACAGTATGCAGGGAAC  197
      |||||||||||| ||||||||||| |||||||||||||||||||||||||
seq2  CTGCTTGGTGACAAAAGAATACTGAAGGAAGTGTACAGTATGCAGGGAAC  194

seq1  CCAGGCGCTTGTCCCTGGAGGGTAGTTAAAGGCCAAAAGACACCTGCCCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCGCTTGTCCCTGGAGGGTAGTTAAAGGCCAAAAGACACCTGCCCT  244

seq1  GCCAGAATAGCAGGAGTTTGAATTCCTCTAAACATAGCAAGGTGGACTCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAATAGCAGGAGTTTGAATTCCTCTAAACATAGCAAGGTGGACTCA  294

seq1  GTCACCTCCAGCCATATGGACTTCATTATCCTGGGAGCCTGCATGAGCTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTCCAGCCATATGGACTTCATTATCCTGGGAGCCTGCATGAGCTG  344

seq1  AGCATTACTGGGTTACAGCGCGCTCTGGATGATGTTATGGTCAATTGATC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTACTGGGTTACAGCGCGCTCTGGATGATGTTATGGTCAATTGATC  394

seq1  CAAATTGGATTATTAAGAAGGAAGCTTGGCTATTAGAGGTTTTCCCTTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGGATTATTAAGAAGGAAGCTTGGCTATTAGAGGTTTTCCCTTTG  444

seq1  TGCTTGGGGATGATGCTCTGAGAGGAACGCTGGTGACTAAGCCTCAGATG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGGGATGATGCTCTGAGAGGAACGCTGGTGACTAAGCCTCAGATG  494

seq1  CCTTGATAGGAGTCGATCCAGGGTGGAGTTTTCTGGGCTCTTGTGCAGAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATAGGAGTCGATCCAGGGTGGAGTTTTCTGGGCTCTTGTGCAGAC  544

seq1  AATCTTTGTGAGTTTGATAAACAGTCCCCCAGCGGAGGACTGAAAACATC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTGTGAGTTTGATAAACAGTCCCCCAGCGGAGGACTGAAAACATC  594

seq1  TTGGCATTGTGACAGACCTGATATCAACAAGCTCGTGCAAATACTATAAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATTGTGACAGACCTGATATCAACAAGCTCGTGCAAATACTATAAC  644

seq1  TTCTTTCCTTACATTCTTCATTTTTGAGTCTAACAGACTTTGGACTTGAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCTTACATTCTTCATTTTTGAGTCTAACAGACTTTGGACTTGAT  694

seq1  TCATTTCGAACAGTGTAATTTTTTTTTTTTTACAAGTCCAACATAAAAAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCGAACAGTGTAATTTTTTTTTTTTTACAAGTCCAACATAAAAAC  744

seq1  CTTGATTCAGCATGTCTCATTTTACAGGAAGTTATAGTAACCCTGTTGCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTCAGCATGTCTCATTTTACAGGAAGTTATAGTAACCCTGTTGCC  794

seq1  TTCTGGTCAGATCCTATGGAAGGTCCTTGACTTTGGTAAGGATAATTTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTCAGATCCTATGGAAGGTCCTTGACTTTGGTAAGGATAATTTAA  844

seq1  GGTTTTTAGAAATGACCTAATATAAACTCCTTTGCCCTAGGGAAGTTCTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTAGAAATGACCTAATATAAACTCCTTTGCCCTAGGGAAGTTCTT  894

seq1  CTGTGTTGTTCTTCTTTTCTTTTGCTTTGCTTTTCAGTCAAAGAACAATG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTGTTCTTCTTTTCTTTTGCTTTGCTTTTCAGTCAAAGAACAATG  944

seq1  GGAAAGAAAAAAGGGGAAGGGGGAGGCGTCACTCTAAAGTTTTCAAGATC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAAAAAAGGGGAAGGGGGAGGCGTCACTCTAAAGTTTTCAAGATC  994

seq1  TGAAGCGACTGAACAAGTTAGAAGCAAACACTAATTTTAAGATATAATCG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCGACTGAACAAGTTAGAAGCAAACACTAATTTTAAGATATAATCG  1044

seq1  CATGAATATAAACAGTGACGGTTCCGTGAAGAGAATTC  1085
      ||||||||||||||||||||||||||||||||||||||
seq2  CATGAATATAAACAGTGACGGTTCCGTGAAGAGAATTC  1082