BAC Information

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BAC

Clone NameB6Ng01-125L14
Chromosome11 (Build37)
Map Location 37,584,100 - 37,680,618
singlet/doubletdoublet
Overlap genenone
Upstream geneOdz2, LOC100039148
Downstream geneLOC276941
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125L14.bB6Ng01-125L14.g
ACCDH928279DH928280
length971985
definitionDH928279|Mus musculus domesticus DNA, BAC clone: B6Ng01-125L14, 5' end.DH928280|Mus musculus domesticus DNA, BAC clone: B6Ng01-125L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,679,650 - 37,680,618)(37,584,100 - 37,585,092)
sequence
gaattctctcctcgtctataaacttctatttcttttaagatttgatgcaa
ctccatctcctacatttcatattttgtttttcttcagagcccagaccaga
tcagagccatgtgtgtgcaggcatttagcatgccatctgctaatctccat
ggctacgtttacaacgtcattacataattacctgtttattgtttccactc
ccccactagagtgatgtttttgtttctgtttttaaataattgactgtttt
ttgttatggcgatactaattggttctttttttaaatagccacctggtata
attcctctttgcagcatttttaagaataatttctattctatattttagat
gtgatttcatcatttctctttgcaatatgctaatcacaatcagtttaaag
tcatctttgttgtgtacattaagactgttacatttccatcctactggagt
aaattgctcacctggttcttggttttctattttctaatcttggaatattt
tctaaatagatatagaattggggatctaaatttcatcttcattggtaact
ttccttcaacctgtagcaatctgcctgttaactggtcctcctagtcttat
ctctatggcttagaatttctgtcttatgcccataacttgtcccaagacct
gagggcagcctggacacagagactgtgacttttaatttaggttctggcat
ccctctctcacatcctaggatgagaacgactggaccagtgtgtattttta
gaaaatgaattttgatgccccaggaaggacagggcaacttttagctccag
ttcctcaatagatgtataactgtcaccctttctttctattatgaattaca
aagctgagcctcagctagcactttgtatacattttgctccacttttggtt
ttcaaattctttattctattttctcagatatttgcaagtgtgtggtgtgt
ggtgttgtgtgtccacctgta
gaattcacttagaatatccccatcatgcaaagggaaaggatcagaaggat
gcagagtagaggctgcagaaaactgattttcagaaaacattgtgtcaaat
gtgaattaaatctgaacaacagcctttcaaatgcaaattcttctgaagag
atgtcattgatatgcaacctcggaaaacctttcaaaagaaataaaatgga
taaatgtgataattaagatctctatttataggaaaatgatcagattacgt
ttgtccagaaatgtttttgtacctgcaactcagagggcagaaatagggag
taaggatcgattttgaaatttgcaggttggaggtgaaaatggaatgatag
cttgcctgacagaggtggggattttcctctgctatgctaagacctattat
tatgcacctataattgccaaggcccctcctgacctctattcactcttccc
tgtgaagtctggttctagccatcctagcaacatcaccctcatttcatgct
ggatagtagctgctcagcaatctgcagcagtgtgccagtctagagtagtg
tttaggagaaactgacccacccgatgcaagaagccaggagcttttatatg
aaatgctttctgtagacagagctggaagaattactggaagatgatctcag
agacagagattaaggcagcgtggggctgtgacagtgtaattgtgtctgaa
tcttcaggttaatgatggaagaaagaaaggggtactctgctgtaaggctc
ctttattagagttcccatggtttcatatgagggagactggtatgtacatg
tcgtacagttgtgcatatgacagagttaatggtttcctcattccttcagt
ccctcacaagcagacacacactatatagtactctcccaaaaaggcattta
ctgagaagaaaaaaatgcataagtgtttttctctcaagttaatgccagtt
gggtctctgtatcatagttatttagctatgacggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_37679650_37680618
seq2: B6Ng01-125L14.b_49_1019 (reverse)

seq1  TACAGGTGGACACACACACA-CACACA-CACACACTTGCAAATATCTGAG  48
      |||||||||||||||| ||| |||||| ||||||||||||||||||||||
seq2  TACAGGTGGACACACA-ACACCACACACCACACACTTGCAAATATCTGAG  49

seq1  AAAATAGAATAAAGAATTTGAAAACCAAAAGTGGAGCAAAATGTATACAA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGAATAAAGAATTTGAAAACCAAAAGTGGAGCAAAATGTATACAA  99

seq1  AGTGCTAGCTGAGGCTCAGCTTTGTAATTCATAATAGAAAGAAAGGGTGA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTAGCTGAGGCTCAGCTTTGTAATTCATAATAGAAAGAAAGGGTGA  149

seq1  CAGTTATACATCTATTGAGGAACTGGAGCT-AAAGTTGCCCTGTCCTTCC  197
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAGTTATACATCTATTGAGGAACTGGAGCTAAAAGTTGCCCTGTCCTTCC  199

seq1  TGGGGCATCAAAATTCATTTTCTAAAAATACACACTGGTCCAGTCGTTCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCATCAAAATTCATTTTCTAAAAATACACACTGGTCCAGTCGTTCT  249

seq1  CATCCTAGGATGTGAGAGAGGGATGCCAGAACCTAAATTAAAAGTCACAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTAGGATGTGAGAGAGGGATGCCAGAACCTAAATTAAAAGTCACAG  299

seq1  TCTCTGTGTCCAGGCTGCCCTCAGGTCTTGGGACAAGTTATGGGCATAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGTCCAGGCTGCCCTCAGGTCTTGGGACAAGTTATGGGCATAAG  349

seq1  ACAGAAATTCTAAGCCATAGAGATAAGACTAGGAGGACCAGTTAACAGGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAATTCTAAGCCATAGAGATAAGACTAGGAGGACCAGTTAACAGGC  399

seq1  AGATTGCTACAGGTTGAAGGAAAGTTACCAATGAAGATGAAATTTAGATC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCTACAGGTTGAAGGAAAGTTACCAATGAAGATGAAATTTAGATC  449

seq1  CCCAATTCTATATCTATTTAGAAAATATTCCAAGATTAGAAAATAGAAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATTCTATATCTATTTAGAAAATATTCCAAGATTAGAAAATAGAAAA  499

seq1  CCAAGAACCAGGTGAGCAATTTACTCCAGTAGGATGGAAATGTAACAGTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAACCAGGTGAGCAATTTACTCCAGTAGGATGGAAATGTAACAGTC  549

seq1  TTAATGTACACAACAAAGATGACTTTAAACTGATTGTGATTAGCATATTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTACACAACAAAGATGACTTTAAACTGATTGTGATTAGCATATTG  599

seq1  CAAAGAGAAATGATGAAATCACATCTAAAATATAGAATAGAAATTATTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGAAATGATGAAATCACATCTAAAATATAGAATAGAAATTATTCT  649

seq1  TAAAAATGCTGCAAAGAGGAATTATACCAGGTGGCTATTTAAAAAAAGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGCTGCAAAGAGGAATTATACCAGGTGGCTATTTAAAAAAAGAA  699

seq1  CCAATTAGTATCGCCATAACAAAAAACAGTCAATTATTTAAAAACAGAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTAGTATCGCCATAACAAAAAACAGTCAATTATTTAAAAACAGAAA  749

seq1  CAAAAACATCACTCTAGTGGGGGAGTGGAAACAATAAACAGGTAATTATG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACATCACTCTAGTGGGGGAGTGGAAACAATAAACAGGTAATTATG  799

seq1  TAATGACGTTGTAAACGTAGCCATGGAGATTAGCAGATGGCATGCTAAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACGTTGTAAACGTAGCCATGGAGATTAGCAGATGGCATGCTAAAT  849

seq1  GCCTGCACACACATGGCTCTGATCTGGTCTGGGCTCTGAAGAAAAACAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCACACACATGGCTCTGATCTGGTCTGGGCTCTGAAGAAAAACAAA  899

seq1  ATATGAAATGTAGGAGATGGAGTTGCATCAAATCTTAAAAGAAATAGAAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAATGTAGGAGATGGAGTTGCATCAAATCTTAAAAGAAATAGAAG  949

seq1  TTTATAGACGAGGAGAGAATTC  969
      ||||||||||||||||||||||
seq2  TTTATAGACGAGGAGAGAATTC  971

seq1: chr11_37584100_37585092
seq2: B6Ng01-125L14.g_68_1052

seq1  GAATTCACTTAGAATATCCCCATCATGCAAAGGGAAAGGATCAGAAGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTAGAATATCCCCATCATGCAAAGGGAAAGGATCAGAAGGAT  50

seq1  GCAGAGTAGAGGCTGCAGAAAACTGATTTTCAGAAAACATTGTGTCAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTAGAGGCTGCAGAAAACTGATTTTCAGAAAACATTGTGTCAAAT  100

seq1  GTGAATTAAATCTGAACAACAGCCTTTCAAATGCAAATTCTTCTGAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTAAATCTGAACAACAGCCTTTCAAATGCAAATTCTTCTGAAGAG  150

seq1  ATGTCATTGATATGCAACCTCGGAAAACCTTTCAAAAGAAATAAAATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATTGATATGCAACCTCGGAAAACCTTTCAAAAGAAATAAAATGGA  200

seq1  TAAATGTGATAATTAAGATCTCTATTTATAGGAAAATGATCAGATTACGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTGATAATTAAGATCTCTATTTATAGGAAAATGATCAGATTACGT  250

seq1  TTGTCCAGAAATGTTTTTGTACCTGCAACTCAGAGGGCAGAAATAGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCAGAAATGTTTTTGTACCTGCAACTCAGAGGGCAGAAATAGGGAG  300

seq1  TAAGGATCGATTTTGAAATTTGCAGGTTGGAGGTGAAAATGGAATGATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATCGATTTTGAAATTTGCAGGTTGGAGGTGAAAATGGAATGATAG  350

seq1  CTTGCCTGACAGAGGTGGGGATTTTCCTCTGCTATGCTAAGACCTATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTGACAGAGGTGGGGATTTTCCTCTGCTATGCTAAGACCTATTAT  400

seq1  TATGCACCTATAATTGCCAAGGCCCCTCCTGACCTCTATTCACTCTTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACCTATAATTGCCAAGGCCCCTCCTGACCTCTATTCACTCTTCCC  450

seq1  TGTGAAGTCTGGTTCTAGCCATCCTAGCAACATCACCCTCATTTCATGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGTCTGGTTCTAGCCATCCTAGCAACATCACCCTCATTTCATGCT  500

seq1  GGATAGTAGCTGCTCAGCAATCTGCAGCAGTGTGCCAGTCTAGAGTAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGTAGCTGCTCAGCAATCTGCAGCAGTGTGCCAGTCTAGAGTAGTG  550

seq1  TTTAGGAGAAACTGACCCACCCGATGCAAGAAGCCAGGAGCTTTTATATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAGAAACTGACCCACCCGATGCAAGAAGCCAGGAGCTTTTATATG  600

seq1  AAATGCTTTCTGTAGACAGAGCTGGAAGAATTACTGGAAGATGATCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTTTCTGTAGACAGAGCTGGAAGAATTACTGGAAGATGATCTCAG  650

seq1  AGACAGAGATTAAGGCAGCGTGGGGCTGTGACAGTGTAATTGTGTCTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGATTAAGGCAGCGTGGGGCTGTGACAGTGTAATTGTGTCTGAA  700

seq1  TCTTCAGGTTAATGATGGAAGAAAGAAGGGGGTACTCTGCTGTAAGGGCT  750
      ||||||||||||||||||||||||||| ||||||||||||||||| ||||
seq2  TCTTCAGGTTAATGATGGAAGAAAGAAAGGGGTACTCTGCTGTAA-GGCT  749

seq1  CCTTTATTAGAGTTCCCATGGTTTCATATGAGGGAGACTGGTATGTACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTAGAGTTCCCATGGTTTCATATGAGGGAGACTGGTATGTACAT  799

seq1  GTCGTACAGTTGTGCATATGACAGAGTTTAATGG-TTCCTCATTCC-TCA  848
      |||||||||||||||||||||||||| ||||||| ||||||||||| |||
seq2  GTCGTACAGTTGTGCATATGACAGAG-TTAATGGTTTCCTCATTCCTTCA  848

seq1  GTCCCTCACCAAGCAGACACACCACTTATAAGTTACTCTCACAAAAAGGC  898
      |||||||| |||||||||||| ||| ||||   ||||||| |||||||||
seq2  GTCCCTCA-CAAGCAGACACA-CAC-TATATAGTACTCTCCCAAAAAGGC  895

seq1  ATTTACCTGAGAAGAAAAAAATGCATAAGGGTGTTTTTTCTCTCAAGTTA  948
      ||||| ||||||||||||||||||||||| |   ||||||||||||||||
seq2  ATTTA-CTGAGAAGAAAAAAATGCATAAGTG---TTTTTCTCTCAAGTTA  941

seq1  ATGCCAGTTGTGTCTCTGTATCATAGTTATTTAGACTATGACGTT  993
      |||||||||| ||||||||||||||||||||||| |||||||| |
seq2  ATGCCAGTTGGGTCTCTGTATCATAGTTATTTAG-CTATGACGGT  985