BAC Information

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BAC

Clone NameB6Ng01-126N22
Chromosome11 (Build37)
Map Location 105,032,407 - 105,156,275
singlet/doubletdoublet
Overlap geneLOC666771, Tlk2, 1700052K11Rik, Mrc2
Upstream geneCrhr1, 4933407P14Rik, Mapt, 1700081L11Rik, Cdc27, Myl4, LOC666721, EG629959, Itgb3, LOC666739, LOC629960, LOC666749, LOC632784, LOC276809, LOC100041125, 4921510J17Rik, Mettl2
Downstream geneRnf190, EG666807, Tanc2, LOC667737, Cyb561, Ace, EG217246, Kcnh6, Wdr68, Ccdc44, Map3k3, Limd2, 2610019A05Rik, 2610204L23Rik, Ddx42, Ftsj3, Psmc5, Smarcd2, Tcam1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126N22.bB6Ng01-126N22.g
ACCDH929130DH929131
length630529
definitionDH929130|Mus musculus domesticus DNA, BAC clone: B6Ng01-126N22, 5' end.DH929131|Mus musculus domesticus DNA, BAC clone: B6Ng01-126N22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,155,645 - 105,156,275)(105,032,407 - 105,032,940)
sequence
gaattctgacaccctatgttaagaatcctttcagtcctttcacctctgat
ccccaagaagagcggccattcctcatccagagtccactagacttcctttc
ctcttggtgatcaggaaggtgccagcccagccccctccccccacttccca
cccctggggtgcctttcaactcctacctcccacaagcacttctacctaga
gccacaggttccccatggtgaaacttgcagagtgcttgccccttccatca
ggttctagcccagcctcccagatgaggggcccatggaagatggcagggta
gggtcggtcagtgctgtgtttgttcggtgacagggaagttgtgtggtttt
taccctcctgttcagttgctttagcgaaaagcccctctcccccaccccct
ctcccccacccccactcccagctccgtgaatccaggctgggcttcttcag
ggctaaggagggtgatccaggccacacagcagctcagacatgggcatttt
gtgtgtaggacagtctgagaaagcagggagggacagaagcagagaccagg
aagcccagggacactggaagcctccttttcctcccagactgggcccctca
tcaggcatctaacccccctgtcaaaagctc
ctgtctcatcgattctcggccttttggctaagatcaagtgtaggaattcc
tgtctcaaaaaaccaaggggtggggcagcaaaggctagtccggatggttc
agtattttagcagtggggacttgttaaaacagagtttatgcctctcttgc
attttagctattagaaagagggaacatggcaatgatttttaaaatatgga
gaagaggttaaaagaggacatgagggaagggaggctgctcttcagggaac
aggaagattgttcagcatcagtgagctgtggggaagagcttatgacttga
taagtgaaacaattgtgtcaagacttgcttagggtgtgggggattgactt
caacagcagtctgcttgctgcctagcaaatgcaaggccctgcctgggttt
gcctcctaggatgggggtagggagtatatgttcaattggcttaagcagag
cttccaactaggcagggaggggagattggaaacaagagatggccggcaag
tggtgaatctcagggaggctgagtgctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_105155645_105156275
seq2: B6Ng01-126N22.b_47_676 (reverse)

seq1  GAGCTTTTGACAGGGGGGTGGAGATGCCTGATGAGGGGCCCAGTCAGGGA  50
      |||||||||||||||||||  |||||||||||||||||||||||| ||||
seq2  GAGCTTTTGACAGGGGGGT-TAGATGCCTGATGAGGGGCCCAGTCTGGGA  49

seq1  GGAAAAGGAGGCTTACAGTGTCCCTGGGCTTCCTGGTCTCTGCTTCTGTC  100
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGAAAAGGAGGCTTCCAGTGTCCCTGGGCTTCCTGGTCTCTGCTTCTGTC  99

seq1  CCTCCCTGCTCTCTCAGACTGTCCTACACACAAAATGCCCATGTCTGGGC  150
      |||||||||| |||||||||||||||||||||||||||||||||||| ||
seq2  CCTCCCTGCTTTCTCAGACTGTCCTACACACAAAATGCCCATGTCTGAGC  149

seq1  TGCTGTGTGGCCTGGATCACCCTCCTGAGCCCTGAAGAAGCCCAGCCTGG  200
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGCTGTGTGGCCTGGATCACCCTCCTTAGCCCTGAAGAAGCCCAGCCTGG  199

seq1  ATTCACGGAGCTGGGAGTGGGGGTGGGGGAGAGGGGGTGGGGGAGAGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACGGAGCTGGGAGTGGGGGTGGGGGAGAGGGGGTGGGGGAGAGGGG  249

seq1  CTTTTCGCTAAAGCAACTGAACAGGAGGGTAAAAACCACACAACTTCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCGCTAAAGCAACTGAACAGGAGGGTAAAAACCACACAACTTCCCT  299

seq1  GTCACCGAACAAACACAGCACTGACCGACCCTACCCTGCCATCTTCCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCGAACAAACACAGCACTGACCGACCCTACCCTGCCATCTTCCATG  349

seq1  GGCCCCTCATCTGGGAGGCTGGGCTAGAACCTGATGGAAGGGGCAAGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCTCATCTGGGAGGCTGGGCTAGAACCTGATGGAAGGGGCAAGCAC  399

seq1  TCTGCAAGTTTCACCATGGGGAACCTGTGGCTCTAGGTAGAAGTGCTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAGTTTCACCATGGGGAACCTGTGGCTCTAGGTAGAAGTGCTTGT  449

seq1  GGGAGGTAGGAGTTGAAAGGCACCCCAGGGGTGGGAAGTGGGGGGAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGTAGGAGTTGAAAGGCACCCCAGGGGTGGGAAGTGGGGGGAGGGG  499

seq1  GCTGGGCTGGCACCTTCCTGATCACCAAGAGGAAAGGAAGTCTAGTGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGCTGGCACCTTCCTGATCACCAAGAGGAAAGGAAGTCTAGTGGAC  549

seq1  TCTGGATGAGGAATGGCCGCTCTTCTTGGGGATCAGAGGTGAAAGGACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATGAGGAATGGCCGCTCTTCTTGGGGATCAGAGGTGAAAGGACTG  599

seq1  AAAGGATTCTTAACATAGGGTGTCAGAATTC  631
      |||||||||||||||||||||||||||||||
seq2  AAAGGATTCTTAACATAGGGTGTCAGAATTC  630

seq1: chr11_105032407_105032940
seq2: B6Ng01-126N22.g_70_604

seq1  GAATTCCTGTCTCATCGATTCTCGGCCTTTTGGCTAAGATCAAGTGTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCTCATCGATTCTCGGCCTTTTGGCTAAGATCAAGTGTAGG  50

seq1  AATTCCTGTCTCAAAAAACCAAGGGGTGGGGCAGCAAAGGCTAGTCCGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTGTCTCAAAAAACCAAGGGGTGGGGCAGCAAAGGCTAGTCCGGA  100

seq1  TGGTTCAGTATTTTAGCAGTGGGGACTTGTTAAAACAGAGTTTATGCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCAGTATTTTAGCAGTGGGGACTTGTTAAAACAGAGTTTATGCCTC  150

seq1  TCTTGCATTTTAGCTATTAGAAAGAGGGAACATGGCAATGATTTTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCATTTTAGCTATTAGAAAGAGGGAACATGGCAATGATTTTTAAAA  200

seq1  TATGGAGAAGAGGTTAAAAGAGGACATGAGGGAAGGGAGGCTGCTCTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGAAGAGGTTAAAAGAGGACATGAGGGAAGGGAGGCTGCTCTTCA  250

seq1  GGGAACAGGAAGATTGTTCAGCATCAGTGAGCTGTGGGGAAGAGCTTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACAGGAAGATTGTTCAGCATCAGTGAGCTGTGGGGAAGAGCTTATG  300

seq1  ACTTGATAAGTGAAACAATTGTGTCAAGACTTGCTTAGGGTGTGGGGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATAAGTGAAACAATTGTGTCAAGACTTGCTTAGGGTGTGGGGGAT  350

seq1  TGACTTCAACAGCAGTCTGCTTGCTGCCTAGCAAATGCAAGGCCCTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCAACAGCAGTCTGCTTGCTGCCTAGCAAATGCAAGGCCCTGCCT  400

seq1  GGGTTTGCCTCCTAGGATGGGGGTAGGGAGTATATGTTCAATTGGCTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGCCTCCTAGGATGGGGGTAGGGAGTATATGTTCAATTGGCTTAA  450

seq1  GCAGAGCTTCCAACTAGGCAGGGAGGGGAGATAGGAAACAAGAGATGGCC  500
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCAGAGCTTCCAACTAGGCAGGGAGGGGAGATTGGAAACAAGAGATGGCC  500

seq1  GGC-AGTGGTGAATCTCAGGGAGGCTGAGTGCTAG  534
      ||| |||||||||||||||||||||||||||||||
seq2  GGCAAGTGGTGAATCTCAGGGAGGCTGAGTGCTAG  535