BAC Information

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BAC

Clone NameB6Ng01-127G06
Chromosome11 (Build37)
Map Location 92,336,404 - 92,487,014
singlet/doubletdoublet
Overlap genenone
Upstream geneKif2b
Downstream geneLOC382545, LOC100039286, Car10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127G06.bB6Ng01-127G06.g
ACCDH929520DH929521
length1,075791
definitionDH929520|Mus musculus domesticus DNA, BAC clone: B6Ng01-127G06, 5' end.DH929521|Mus musculus domesticus DNA, BAC clone: B6Ng01-127G06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,336,404 - 92,337,494)(92,486,221 - 92,487,014)
sequence
gaattcccattgactatgacatagccaaataaaatgtcaccaccccaccc
ccatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtat
gtatgaaatccatagttagttttggctgcagctgtgcatttataagcctt
aaaatatatatggtattccatagcattaggatagaatatagtcatgtgtg
aatgagacaagagtggtaggtttcgagagtggtactgaagcatattctat
ataataagaacgatttggggtacttttggtgtgatctatatgctaaatag
ctttggataacatccatccttcttaagtggagttttaactctattcttcc
tcatgcagtgtgcctcacatatccttagtgatttaaatttgtttccatat
tttcacttttatggatataattctaaattatgtcctaccactctctcgaa
cttgagcataccaccagatgatcatattgttttataccaacaatactcat
aggagtattgacaaaatttgccatatgccaaagggtttttcttaactttc
ctatctttctcagctcatttaggactttttccatctattattttagtagt
aatcacgtttgttattctgtaccagtatttatgggcatggcctttttttt
tcccaggggtgggttacttgggtcatctacatcttttgcagtggatctat
ttatgttggttggagatactcatttcgtgttttctacattggaactctga
gacattccctatactatccatgggctattagcttttcttccaaagacttt
caaagataattttattccaagtaatagttttctggaccttctctatgttc
tcttaagttcttggatgctccacttttgcattcatactataaagagtagt
aatacattaatatctatgttacaataattcctagagcttctatgtctcaa
ctcgtccaggaatgtgactatctcattactcacaaggacttctgtaactt
cagcttattaaagacggaacttagtcatcttctggcggttcccaggaggg
gttccttttctagacactcctgatc
gaattctgtattcaggcatagcagcacactcatttatggtgagtttctgg
aggtagggtgtggttttgatttacaagtccagtgcctggcattgccgaag
gtgttcaacagtgatgtgagtgatctgagccttaggcaatactgcaaagt
aggaggaaacatgagactcctaatgcagaagagttacctctcattccagg
ggagtttctagctcttttcatttggaatatggccattgttggaaaatcct
agacttggaattaattctccaccaagtgaaaaaaattaaaacagcacata
gtaattattttttacttatttgtattattaattgatgcattattaattaa
cagctttgcagcctgaaaagcaaccactaatgccaacaacaaggtaactc
ttgagtatctcacaactcctttaattacgtttaaaacaatatatgtcacc
acaactttctacctttgttcagtactcccctgccttgtttgtagtagtta
accaaacagctccagaatcttgaaaggcagacacaaaacttatctttgag
aaaataataatagcagaaacaggagacaatagagtgatgttactcaaggc
agcggaggaacaacaatatgaactaaccagtaacaccagagctcatgtct
ctagctgcatatgtatgggatagcatttgaaatttaaatgaagaaaacat
ctaataagattgtttttgaaaaaaaaagaaagaagaaagaagaaaggatg
gaggagaagcaagaaaatggaaagagaagaagaaagaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_92336404_92337494
seq2: B6Ng01-127G06.b_44_1118

seq1  GAATTCCCATTGACTATGACATAGCCAAATAAAATGTCACCACCCCACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTGACTATGACATAGCCAAATAAAATGTCACCACCCCACCC  50

seq1  CCATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTAT  100

seq1  GTATGAAATCCATAGTTAGTTTTGGCTGCAGCTGTGCATTTATAAGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAAATCCATAGTTAGTTTTGGCTGCAGCTGTGCATTTATAAGCCTT  150

seq1  AAAATATATATGGTATTCCATAGCATTAGGATAGAATATAGTCATGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATATATGGTATTCCATAGCATTAGGATAGAATATAGTCATGTGTG  200

seq1  AATGAGACAAGAGTGGTAGGTTTCGAGAGTGGTACTGAAGCATATTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGACAAGAGTGGTAGGTTTCGAGAGTGGTACTGAAGCATATTCTAT  250

seq1  ATAATAAGAACGATTTGGGGTACTTTTGGTGTGATCTATATGCTAAATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAGAACGATTTGGGGTACTTTTGGTGTGATCTATATGCTAAATAG  300

seq1  CTTTGGATAACATCCATCCTTCTTAAGTGGAGTTTTAACTCTATTCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGATAACATCCATCCTTCTTAAGTGGAGTTTTAACTCTATTCTTCC  350

seq1  TCATGCAGTGTGCCTCACATATCCTTAGTGATTTAAATTTGTTTCCATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCAGTGTGCCTCACATATCCTTAGTGATTTAAATTTGTTTCCATAT  400

seq1  TTTCACTTTTATGGATATAATTCTAAATTATGTCCTACCACTCTCTCGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTTTATGGATATAATTCTAAATTATGTCCTACCACTCTCTCGAA  450

seq1  CTTGAGCATACCACCAGATGATCATATTGTTTTATACCAACAATACTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGCATACCACCAGATGATCATATTGTTTTATACCAACAATACTCAT  500

seq1  AGGAGTATTGACAAAATTTGCCATATGCCAAAGGGTTTTTCTTAACTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTATTGACAAAATTTGCCATATGCCAAAGGGTTTTTCTTAACTTTC  550

seq1  CTATCTTTCTCAGCTCATTTAGGAC-TTTTCCATCTATTATTTTAGTAGT  599
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTATCTTTCTCAGCTCATTTAGGACTTTTTCCATCTATTATTTTAGTAGT  600

seq1  AATCACGTTTGTTATTCTGTACCAGTATTTATGGGCATGGCC--TTTTTT  647
      ||||||||||||||||||||||||||||||||||||||||||  ||||||
seq2  AATCACGTTTGTTATTCTGTACCAGTATTTATGGGCATGGCCTTTTTTTT  650

seq1  TCCCAGGGGTGGGTTACTTGGGTCATCTACATC-TTTGCAGTGGATCTAT  696
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCCCAGGGGTGGGTTACTTGGGTCATCTACATCTTTTGCAGTGGATCTAT  700

seq1  TTATGTTGGTTGGAGATACTCATTTCGTGTTTTCAACATTGGAACTCTGA  746
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTATGTTGGTTGGAGATACTCATTTCGTGTTTTCTACATTGGAACTCTGA  750

seq1  GACATTCCCTATACTATCCAT-GGCTATTAGC-TTTCTTCCAAAGACTTT  794
      ||||||||||||||||||||| |||||||||| |||||||||||||||||
seq2  GACATTCCCTATACTATCCATGGGCTATTAGCTTTTCTTCCAAAGACTTT  800

seq1  CAAAGATAATTTTATTCCAAGTAATAGTTTTCTGGACCTTCTCTATGTTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAAAGATAATTTTATTCCAAGTAATAGTTTTCTGGACCTTCTCTATG-TT  849

seq1  CTCATTAAGTTCTTGGATGCTCCACTTTTGCATTCATACCTATAAAGAGT  894
      ||| |||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTC-TTAAGTTCTTGGATGCTCCACTTTTGCATTCATA-CTATAAAGAGT  897

seq1  AGGTAATCACATTAATATTCTATGTTAACAAATAATTCCTTAGAGCTTCT  944
      | ||||| ||||||||| |||||||||   ||||||||| ||||||||||
seq2  A-GTAAT-ACATTAATA-TCTATGTTA--CAATAATTCC-TAGAGCTTCT  941

seq1  ATGTCTCTATACTCCTACCCAGGAATGTTACTATCACCATCTACTTCACA  994
      |||||||   |||| |  |||||||||| ||||||  ||| ||| |||||
seq2  ATGTCTC--AACTCGT--CCAGGAATGTGACTATC-TCAT-TAC-TCACA  984

seq1  AAGATCTCTGAAACTTTCAAGCCTTATTAAAGACTGAACATATGCCATCT  1044
      | ||  |||| ||| ||||   |||||||||||| |||| || | |||||
seq2  AGGACTTCTGTAAC-TTCA--GCTTATTAAAGACGGAACTTA-GTCATCT  1030

seq1  TCTTGCGGTTCCCAGGATGGTGTTCTCTTTTTCTAGACACT-CTGATC  1091
      ||| ||||||||||||| || ||  || ||||||||||||| ||||||
seq2  TCTGGCGGTTCCCAGGA-GGGGT--TCCTTTTCTAGACACTCCTGATC  1075

seq1: chr11_92486221_92487014
seq2: B6Ng01-127G06.g_68_855 (reverse)

seq1  TTCTTTCTTTCTTTCTTTCCTTTTTCTTTGCTTCTTCCTTCCTTCCTTTC  50
      |||||||||  | ||||||| ||||| ||||||||  | ||| |||||||
seq2  TTCTTTCTTCTTCTCTTTCCATTTTC-TTGCTTCT--CCTCCATCCTTTC  47

seq1  TTTCTTTCTTTCTTTCTTTTTTTTTTCAAAAACAATCTTATTAGATGTTT  100
       ||||||| ||||||| |||||||||||||||||||||||||||||||||
seq2  -TTCTTTC-TTCTTTC-TTTTTTTTTCAAAAACAATCTTATTAGATGTTT  94

seq1  TCTTCATTTAAATTTCAAATGCTATCCCATACATATGCAGCTAGAGACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTTAAATTTCAAATGCTATCCCATACATATGCAGCTAGAGACAT  144

seq1  GAGCTCTGGTGTTACTGGTTAGTTCATATTGTTGTTCCTCCGCTGCCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCTGGTGTTACTGGTTAGTTCATATTGTTGTTCCTCCGCTGCCTTG  194

seq1  AGTAACATCACTCTATTGTCTCCTGTTTCTGCTATTATTATTTTCTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACATCACTCTATTGTCTCCTGTTTCTGCTATTATTATTTTCTCAAA  244

seq1  GATAAGTTTTGTGTCTGCCTTTCAAGATTCTGGAGCTGTTTGGTTAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGTTTTGTGTCTGCCTTTCAAGATTCTGGAGCTGTTTGGTTAACTA  294

seq1  CTACAAACAAGGCAGGGGAGTACTGAACAAAGGTAGAAAGTTGTGGTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAACAAGGCAGGGGAGTACTGAACAAAGGTAGAAAGTTGTGGTGAC  344

seq1  ATATATTGTTTTAAACGTAATTAAAGGAGTTGTGAGATACTCAAGAGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTGTTTTAAACGTAATTAAAGGAGTTGTGAGATACTCAAGAGTTA  394

seq1  CCTTGTTGTTGGCATTAGTGGTTGCTTTTCAGGCTGCAAAGCTGTTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTGTTGGCATTAGTGGTTGCTTTTCAGGCTGCAAAGCTGTTAATT  444

seq1  AATAATGCATCAATTAATAATACAAATAAGTAAAAAATAATTACTATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGCATCAATTAATAATACAAATAAGTAAAAAATAATTACTATGTG  494

seq1  CTGTTTTAATTTTTTTCACTTGGTGGAGAATTAATTCCAAGTCTAGGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTAATTTTTTTCACTTGGTGGAGAATTAATTCCAAGTCTAGGATT  544

seq1  TTCCAACAATGGCCATATTCCAAATGAAAAGAGCTAGAAACTCCCCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACAATGGCCATATTCCAAATGAAAAGAGCTAGAAACTCCCCTGGA  594

seq1  ATGAGAGGTAACTCTTCTGCATTAGGAGTCTCATGTTTCCTCCTACTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGGTAACTCTTCTGCATTAGGAGTCTCATGTTTCCTCCTACTTTG  644

seq1  CAGTATTGCCTAAGGCTCAGATCACTCACATCACTGTTGAACACCTTCGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATTGCCTAAGGCTCAGATCACTCACATCACTGTTGAACACCTTCGG  694

seq1  CAATGCCAGGCACTGGACTTGTAAATCAAAACCACACCCTACCTCCAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCCAGGCACTGGACTTGTAAATCAAAACCACACCCTACCTCCAGAA  744

seq1  ACTCACCATAAATGAGTGTGCTGCTATGCCTGAATACAGAATTC  794
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACCATAAATGAGTGTGCTGCTATGCCTGAATACAGAATTC  788