BAC Information

Click to search

BAC

Clone NameB6Ng01-127K24
Chromosome11 (Build37)13 (Build37)
Map Location 59,199,925 - 59,200,00648,775,941 - 48,776,594
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene2210415F13Rik, LOC624814, 1810065E05Rik, OTTMUSG00000005737, 4930504O13Rik, Olfr30, Olfr333-ps1, Olfr332, Olfr331, Olfr330, Olfr329, Olfr328, Olfr327-ps1, Olfr325, Olfr324, 2210407C18Rik, Olfr323, Trim58, Olfr216, OTTMUSG00000005755, Olfr320, LOC668058, Olfr319, Olfr318, Olfr317, Olfr316, Olfr315, Olfr314, 3100002J23Rik, Olfr313, Olfr312, GA_x5J8B7W3UM0-1747565-1747342, Olfr311, 2810021J22Rik, Zfp39, Butr1, Rnf187, LOC676691, Hist3h2ba, Hist3h2bb, Hist3h2a, LOC382523, Trim17, Trim11, Obscn, A230051G13Rik, 4930543L23Rik, Gja12, Guk1, Mrpl55, 2310033P09Rik, Arf1, Wnt3a, Wnt9a, Gm249
Downstream gene1110031B06Rik, Jmjd4, BC050078, LOC432565, Zkscan17, Nlrp3, Olfr222, LOC668157, Olfr223, GA_x5J8B7W3UM0-970645-971221, Olfr225, AA536749, 4933433K01Rik, Flcn, Cops3, Nt5m, Med9, Rasd1, Pemt, Rai1, Srebf1, Tom1l2, LOC667892, Lrrc48
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127K24.bB6Ng01-127K24.g
ACCDH929738DH929739
length787658
definitionDH929738|Mus musculus domesticus DNA, BAC clone: B6Ng01-127K24, 5' end.DH929739|Mus musculus domesticus DNA, BAC clone: B6Ng01-127K24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(59,199,925 - 59,200,006)(48,775,941 - 48,776,594)
sequence
gaattctttgctaactacacccatgcattggtccaccttacattgcatag
ttgagctgcatttgtcaggacttcattgagagaaacacaccaaaaaactt
ctggtggtgtgttgcagtttcttgccactttctgaaagtgggctaattgg
cagagtgatgtcagctgagacaacacaggtgctgaggcaaaacctgtgga
ggacactcgatgtttggagagaggataaataggactccatgcagcagagg
ctgtgcttggcttgcttacagagctagctgtgcaatgcttgtgagcctag
tgtcttcactgatcatcacttccctaagagaggcacagcccagaacttct
cctggcttctcgccattgacttgagccaaggctgaggcctagctgtctct
gctaggtagtgccacagctgctgagtgtttgctatcctgactctaccaaa
ctggactgctggtgtatccatgaagtgtttgtgagtgaactgagatgctg
ctgctgctactaacctgtaaactaaactgccgatttccagacaacacaga
cagaaggtgccccaaagaacctttctaaacaggtccgcttccctgccccc
tcctgtatcctttcttttccactacctggggggtgggggagagggctaaa
agggaggttaaagcatttaagaaccatcattaaaataagatttttggggc
tagagagatggctcagtggttaagagcactgactgctcttccagaggtcc
tgagttcaattcccagcaaccacatgggggctcacaa
gaattcttgatcgtatcttgtcccatatatacctgacatggtcttgagac
atacatgtcatggttccaggaaccctaatggaaccttgaagcctgagcca
ccagctctcgtgtttggtagaaggtgctcaggaccgaactaccttatcaa
ctgctgtagccatgtctgtcgtgactggaattggtgcctgcgtgcgagtt
tcctgagggtatcttgtccctgtgagtgccccctaagccagaccaaggcc
aaggagatggctcagtcagcagcgtttgccatacatgcagacctgagttc
agaccccagcaccatgtaagacgctccgtgtgacagacagcacacagctg
tgtcatagcactgtgaagaaggcaggaggcttcctggagtttgctggcct
ggagagaagaggagataaacacagccagcctcagaattggccacaaatcc
taccttggggaagggctttttacttggtttctacttggcctcagtgctca
ggatccaggagcagagtgtcagggttccaaacacagtcatctctcagccc
ttcccctccagcctccaaagcggggcttaactggtgacatatcggtcctt
cccagaatttagtcacagaaaggattggggcagggggttgggggtagggg
aggagtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_59199925_59200006
seq2: B6Ng01-127K24.b_756_837 (reverse)

seq1  TTGTGAGCCATCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTAGAAG  50
      |||||||||  |||||||||||||||||||||||||||||||||| ||||
seq2  TTGTGAGCCCCCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAG  50

seq1  AGCAGTCAATGCTCTTAACCACTGAGCCATCT  82
      |||||||| |||||||||||||||||||||||
seq2  AGCAGTCAGTGCTCTTAACCACTGAGCCATCT  82

seq1: chr13_48775941_48776594
seq2: B6Ng01-127K24.g_69_726 (reverse)

seq1  AGACTCCT-CCCTACCCCC-AGCCCCTGCCCCAATCCTTTCTGTGACT-A  47
      |||||||| |||||||||| | |||||||||||||||||||||||||| |
seq2  AGACTCCTCCCCTACCCCCAACCCCCTGCCCCAATCCTTTCTGTGACTAA  50

seq1  ATTCTGGGAAGGACCGATATGTCACCAGTTAAG-CCCGCTTTGGAGGCTG  96
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATTCTGGGAAGGACCGATATGTCACCAGTTAAGCCCCGCTTTGGAGGCTG  100

seq1  GAGGGGAAGGGCTGAGAGATGACTGTGTTTGGAACCCTGACACTCTGCTC  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAAGGGCTGAGAGATGACTGTGTTTGGAACCCTGACACTCTGCTC  150

seq1  CTGGATCCTGAGCACTGAGGCCAAGTAGAAACCAAGTAAAAAGCCCTTCC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATCCTGAGCACTGAGGCCAAGTAGAAACCAAGTAAAAAGCCCTTCC  200

seq1  CCAAGGTAGGATTTGTGGCCAATTCTGAGGCTGGCTGTGTTTATCTCCTC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGTAGGATTTGTGGCCAATTCTGAGGCTGGCTGTGTTTATCTCCTC  250

seq1  TTCTCTCCAGGCCAGCAAACTCCAGGAAGCCTCCTGCCTTCTTCACAGTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCAGGCCAGCAAACTCCAGGAAGCCTCCTGCCTTCTTCACAGTG  300

seq1  CTATGACACAGCTGTGTGCTGTCTGTCACACGGAGCGTCTTACATGGTGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGACACAGCTGTGTGCTGTCTGTCACACGGAGCGTCTTACATGGTGC  350

seq1  TGGGGTCTGAACTCAGGTCTGCATGTATGGCAAACGCTGCTGACTGAGCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTCTGAACTCAGGTCTGCATGTATGGCAAACGCTGCTGACTGAGCC  400

seq1  ATCTCCTTGGCCTTGGTCTGGCTTAGGGGGCACTCACAGGGACAAGATAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTTGGCCTTGGTCTGGCTTAGGGGGCACTCACAGGGACAAGATAC  450

seq1  CCTCAGGAAACTCGCACGCAGGCACCAATTCCAGTCACGACAGACATGGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGAAACTCGCACGCAGGCACCAATTCCAGTCACGACAGACATGGC  500

seq1  TACAGCAGTTGATAAGGTAGTTCGGTCCTGAGCACCTTCTACCAAACACG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAGTTGATAAGGTAGTTCGGTCCTGAGCACCTTCTACCAAACACG  550

seq1  AGAGCTGGTGGCTCAGGCTTCAAGGTTCCATTAGGGTTCCTGGAACCATG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGGTGGCTCAGGCTTCAAGGTTCCATTAGGGTTCCTGGAACCATG  600

seq1  ACATGTATGTCTCAAGACCATGTCAGGTATATATGGGACAAGATACGATC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTATGTCTCAAGACCATGTCAGGTATATATGGGACAAGATACGATC  650

seq1  AAGAATTC  654
      ||||||||
seq2  AAGAATTC  658