BAC Information

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BAC

Clone NameB6Ng01-130B21
Chromosome11 (Build37)
Map Location 8,113,511 - 8,114,549
singlet/doubletsinglet
Overlap genenone
Upstream geneIgfbp3
Downstream geneLOC665380, Tns3, LOC638720, Pkd1l1, LOC624800, Hus1, Sunc1, OTTMUSG00000005148, Upp1, LOC626887, LOC100041469, Abca13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130B21.bB6Ng01-130B21.g
ACCDH931514DH931515
length1,2211,048
definitionDH931514|Mus musculus domesticus DNA, BAC clone: B6Ng01-130B21, 5' end.DH931515|Mus musculus domesticus DNA, BAC clone: B6Ng01-130B21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctatcttcctctatcccccatatttggagacagggtatttgca
tctgtggctattttcatcttaagtgatctcttatatacatttttgttata
cagaatacgttgcctttaatgaatcttgaatgaaagatttacaacaaggt
ggcatgatgtaagatcaatatgcaaatgatataaggtcaatatgcaaata
atataagggaaatatacaaaataaatcacatatatgtaccaagaataaac
aagcagaatttgaaacagcaacaccaccaccaccaacaacaaaaacattc
aaagtttctggatatcaaaccatatatttctaagtaacatgagccaaaga
gaaaagctaacaaaaataaataataagctaataaaaattaaacttattca
gaggacgtaaagaagtactatccaaaaaacaaacaaacaaacaaacaaat
aaataaaaagaagtactatccctaatattaaactgtaccagagagaagta
gtcataaaaatttcatggtattggtatagaaagtgacaggttgatcaatg
aaatagaatcaaagaccctgaaataagcacacacacacacacacacacac
acacttatggacacctgacttttgacaaagaaggcaaaaccatacaatga
aagaaggaagcatcttcaacaaatggtgctggtctaactggatgtctgca
tattgaagaattcaaatagacccataatcaccactgcaaaaactcaagtt
caagtaaatcaaggacctcaacataaaaccagatacactaaatctaatag
aataaaaagtggagaatagccttaaatacattgttacagaagacaactcc
ttgaacagaacaccaatggctcagcctctaagattagtgattgacaaatg
gatcctcttgaaactgaaaagcatctgtaaaggcaaaggacactgtcact
aggacaaatggcagcctacagatttgggaaagatcttcaccaactctaca
tccacagagggctaatatccaaaatatataaagaattcaggaaactagac
atcaacaaccaaataacccattaaaaatggtatacagagctaaacagaga
cctcctccacagcggaatctcttatggccaacaaacaaaagaaatgttca
ggtcttagtcatcagcaaatgcaaatcaacatacctccttgagaaattct
tacctttacacaccctactag
gaattctctttaaactttctgccaatctcaccttcttcccgtctgagctt
ggagcctctgtcctttcctaactatttactactctgtaaggagttttgtt
tctcctggacctttgcatcttttacttctaactcatatgagaaatccctg
tggcattatatctagttatttttcttctccccatgtctactctgttgact
gctctcattatgaactcccttgctttgctcaaaaatctaatcatcccatc
ccgttttgcacctttatcctattaacacttcttctgggggctgataccct
ctgccatagtgtttcgggcttagagaagtcatgactccaaatgtctccct
ttcatacttagttcctaagatgtgtgatacatcttttattccatgaaatc
cttacatcttcacaccacacacatacatacacacaccaccataccacccc
acacacatgcacatgttcttgaatatgtgaactacagagcacacactgaa
aaagtgtatctaacggacaggagagtccctaaatcctcaacaccagcata
agtcctgggacacagttaggtgtcctataaacatttatgggataaacaaa
taaactgggatctcagcagaggtctagttcttttcccaactatctaaatg
ttttgttttattttgttttaattagaaaccttgtttaacaggcagaacaa
attttgcctcatggggcatgggtattatttatgggttattttctatttgc
tttctttaagaatgtatttattttcctttgtaactgtagaaaatgcaacc
cctgccattttagctcaattaatccagtcataaaagattgtgcagcaatt
tagtgcagaaatttagaacaaggtgaggaaggatagctaaatgcaatctt
ccaccatgaggcaatgtccatctgccttgaatagaagcttatcctgaagg
tagccttgctgtaaagtacaagagaagcagtatgaatcagctatgagccc
gagtttagcatgctttaatcctgggctgcatctccaaaatcaggtcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_8113511_8114549
seq2: B6Ng01-130B21.g_69_1116

seq1  GAATTCTCTTTAAACTTTCTGCCAATCTCACCTTCTTCCCGTCTGAGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTAAACTTTCTGCCAATCTCACCTTCTTCCCGTCTGAGCTT  50

seq1  GGAGCCTCTGTCCTTTCCTAACTATTTACTACTCTGTAAGGAGTTTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTCTGTCCTTTCCTAACTATTTACTACTCTGTAAGGAGTTTTGTT  100

seq1  TCTCCTGGACCTTTGCATCTTTTACTTCTAACTCATATGAGAAATCCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGGACCTTTGCATCTTTTACTTCTAACTCATATGAGAAATCCCTG  150

seq1  TGGCATTATATCTAGTTATTTTTCTTCTCCCCATGTCTACTCTGTTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTATATCTAGTTATTTTTCTTCTCCCCATGTCTACTCTGTTGACT  200

seq1  GCTCTCATTATGAACTCCCTTGCTTTGCTCAAAAATCTAATCATCCCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCATTATGAACTCCCTTGCTTTGCTCAAAAATCTAATCATCCCATC  250

seq1  CCGTTTTGCACCTTTATCCTATTAACACTTCTTCTGGGGGCTGATACCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTTTGCACCTTTATCCTATTAACACTTCTTCTGGGGGCTGATACCCT  300

seq1  CTGCCATAGTGTTTCGGGCTTAGAGAAGTCATGACTCCAAATGTCTCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATAGTGTTTCGGGCTTAGAGAAGTCATGACTCCAAATGTCTCCCT  350

seq1  TTCATACTTAGTTCCTAAGATGTGTGATACATCTTTTATTCCATGAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACTTAGTTCCTAAGATGTGTGATACATCTTTTATTCCATGAAATC  400

seq1  CTTACATCTTCACACCACACACATACATACACACACCACCATACCACCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATCTTCACACCACACACATACATACACACACCACCATACCACCCC  450

seq1  ACACACATGCACATGTTCTTGAATATGTGAACTACAGAGCACACACTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATGCACATGTTCTTGAATATGTGAACTACAGAGCACACACTGAA  500

seq1  AAAGTGTATCTAACGGACAGGAGAGTCCCTAAATCCTCAACACCAGCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTATCTAACGGACAGGAGAGTCCCTAAATCCTCAACACCAGCATA  550

seq1  AGTCCTGGGACACAGTTAGGTGTCCTATAAACATTTATGGGATAAACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGGGACACAGTTAGGTGTCCTATAAACATTTATGGGATAAACAAA  600

seq1  TAAACT-GGATCTCAGCAGAGGTCTAGTTCTTTT-CCAACTATCT-AATG  647
      |||||| ||||||||||||||||||||||||||| |||||||||| ||||
seq2  TAAACTGGGATCTCAGCAGAGGTCTAGTTCTTTTCCCAACTATCTAAATG  650

seq1  TTTTGTTTTATTTTGTTTT-ATTAGAAA-CTTGTTTAACAGGCAGAACAA  695
      ||||||||||||||||||| |||||||| |||||||||||||||||||||
seq2  TTTTGTTTTATTTTGTTTTAATTAGAAACCTTGTTTAACAGGCAGAACAA  700

seq1  A-TTTGCCTCAT-GGGCATGGGTA-TATTTAT-GGTTATTTTCTATTTGC  741
      | |||||||||| ||||||||||| ||||||| |||||||||||||||||
seq2  ATTTTGCCTCATGGGGCATGGGTATTATTTATGGGTTATTTTCTATTTGC  750

seq1  -TTCTTTAAG-ATGTATTTATTTTCC-TTGTAACTGTAG-AAATGCAACC  787
       ||||||||| ||||||||||||||| |||||||||||| ||||||||||
seq2  TTTCTTTAAGAATGTATTTATTTTCCTTTGTAACTGTAGAAAATGCAACC  800

seq1  CCTGCCA-TTTAGCTCAATTAATCCAGTCAT-AAAGATTGTGCAGCAATT  835
      ||||||| ||||||||||||||||||||||| ||||||||||||||||||
seq2  CCTGCCATTTTAGCTCAATTAATCCAGTCATAAAAGATTGTGCAGCAATT  850

seq1  TAGTGCAGGATATTTAG-ACAAGGTGAGGAAGGATAGCTAAAATGCAATC  884
      ||||||| || |||||| ||||||||||||||||||||| ||||||||||
seq2  TAGTGCA-GAAATTTAGAACAAGGTGAGGAAGGATAGCT-AAATGCAATC  898

seq1  TTCCACCATGAGGCAATGTCCATCTGCCTTGAATAAGAAGCTTATCCTGA  934
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTCCACCATGAGGCAATGTCCATCTGCCTTGAAT-AGAAGCTTATCCTGA  947

seq1  AGGTAGCCTTGCTGTAAAGTACAAAGAGAAGCAGTATGAATCAGCTATGA  984
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGGTAGCCTTGCTGTAAAGTAC-AAGAGAAGCAGTATGAATCAGCTATGA  996

seq1  GCCCGAGTTTAGCATGCTTAAATCCCTGGGCTGCAATCTCCAAAATCTAG  1034
      ||||||||||||||||||| ||| |||||||||| |||||||||||| ||
seq2  GCCCGAGTTTAGCATGCTTTAAT-CCTGGGCTGC-ATCTCCAAAATC-AG  1043

seq1  GTCAA  1039
      |||||
seq2  GTCAA  1048