BAC Information

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BAC

Clone NameB6Ng01-131A13
Chromosome11 (Build37)
Map Location 3,231,250 - 3,231,741
singlet/doubletsinglet
Overlap genePik3ip1
Upstream geneLOC236604, Sfi1, LOC623257, Eif4enif1, Drg1, Patz1
Downstream geneLimk2, Rnf185, 8430429K09Rik, LOC100041573, Pla2g3, Pib5pa, Selm, Smtn, Map1lc3-5, LOC625608, Tug1, Morc2a, LOC664900, Osbp2, LOC664920, 4921536K21Rik, Dusp18, Slc35e4, Tcn2, LOC100041720, Pes1, Gal3st1, Sec14l4, Sec14l3, 1700020C11Rik, Sec14l2, LOC625729, Rnf215, 4930562D19Rik, Sf3a1, Tbc1d10a, 2410008K03Rik, LOC625760, Osm, Lif
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131A13.bB6Ng01-131A13.g
ACCDH932194DH932195
length492826
definitionDH932194|Mus musculus domesticus DNA, BAC clone: B6Ng01-131A13, 5' end.DH932195|Mus musculus domesticus DNA, BAC clone: B6Ng01-131A13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tctcttctactccccagagtcttacccttttaaagtccgtttgctttgtg
tggcaggcgcacgaacctcccctctccagcctcctcccgtggctctctgc
tgaggggagtgggagcttaagagatgaggcagagaccctcagctggggtc
tctattggatcttttgcttccctgaatcaaaggcttttgtggaattctct
tgggagctggcggtgtctgttaaactagcagaaagtggctgtattcgtag
agaagggaacaccagtttatataacattgacttctcaacactgggatgac
ttccatgtctgactgcccagaaccaaactcaccatctccacagaaagacc
ttagggagaaagaccttcttgtaccttcaaagtggtcccaagtccaagaa
taacaaccctttgcagttgtgcagcgatcttaagcttttttaaaaggaag
gaaggaaggaaggaaggaaggaaggaaggaaggaaggaagga
gaattcttgtctccaagggcctacttaatagatgagcaaagccatgcatg
gtcctgggaagtacaggcaggaggatcaggccagcctgggctacagaaga
acccatctcaaaaataataagactgtgctcacaccagctctgagcaagag
gatgctaacgcgaactgcagaggtaacttaaattattcttgctatagttc
aaaaatgtaaaaggagcagcaggaattaaatttagtaatctattttatat
aatctattccacaaaatattatcctgacatgtcattaacattttgaaatg
atgaacagggtacttcacatgcctcttcgtgctgcctttaaagatcctct
gagcagcctggtgcagtgctgagtacctgtgcttccagggttgttctcag
ctacatagtgagtgtgagggcagccagggctatgtgagaccctgacacga
aaacaaacaaatcctgtcttcatttcagactgtattgttcagtttggatt
tacatctcaagtattcactaaagggtatcaaacagcacagctctttgtgt
gtgtgtgtgtactctcttgaatgtgcatgcacacaagcttgtgcatgtag
gatgtgcatgtgtgcatgccgacctgcttgcctgtctatctgtctgtctg
tgtgggtctgtctgtctgtgtctgtgcctatgtttgtgcttgtctgtttt
gaagcagggtcccctatagcctggttgccttcaccttgttatgtgattga
ggctggtcttgaactcctgactctccagtgcttatttctcaagtacttgg
attgtgggcatgtgactgtgctggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_3231250_3231741
seq2: B6Ng01-131A13.b_54_545

seq1  TCTCTTCTACTCCCCAGAGTCTTACCCTTTTAAAGTCCGTTTGCTTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTACTCCCCAGAGTCTTACCCTTTTAAAGTCCGTTTGCTTTGTG  50

seq1  TGGCAGGCGCACGAACCTCCCCTCTCCAGCCTCCTCCCGTGGCTCTCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGCGCACGAACCTCCCCTCTCCAGCCTCCTCCCGTGGCTCTCTGC  100

seq1  TGAGGGGAGTGGGAGCTTAAGAGATGAGGCAGAGACCCTCAGCTGGGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGAGTGGGAGCTTAAGAGATGAGGCAGAGACCCTCAGCTGGGGTC  150

seq1  TCTATTGGATCTTTTGCTTCCCTGAATCAAAGGCTTTTGTGGAATTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGGATCTTTTGCTTCCCTGAATCAAAGGCTTTTGTGGAATTCTCT  200

seq1  TGGGAGCTGGCGGTGTCTGTTAAACTAGCAGAAAGTGGCTGTATTCGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCTGGCGGTGTCTGTTAAACTAGCAGAAAGTGGCTGTATTCGTAG  250

seq1  AGAAGGGAACACCAGTTTATATAACATTGACTTCTCAACACTGGGATGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGAACACCAGTTTATATAACATTGACTTCTCAACACTGGGATGAC  300

seq1  TTCCATGTCTGACTGCCCAGAACCAAACTCACCATCTCCACAGAAAGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGTCTGACTGCCCAGAACCAAACTCACCATCTCCACAGAAAGACC  350

seq1  TTAGGGAGAAAGACCTTCTTGTACCTTCAAAGTGGTCCCAAGTCCAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAGAAAGACCTTCTTGTACCTTCAAAGTGGTCCCAAGTCCAAGAA  400

seq1  TAACAACCCTTTGCAGTTGTGCAGCGATCTTAAGCTTTTTTAAAAGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAACCCTTTGCAGTTGTGCAGCGATCTTAAGCTTTTTTAAAAGGAAG  450

seq1  GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA  492
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA  492