BAC Information

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BAC

Clone NameB6Ng01-131A17
Chromosome11 (Build37)
Map Location 72,693,643 - 72,757,523
singlet/doubletdoublet
Overlap geneZzef1
Upstream geneAipl1, 6720460F02Rik, Pitpnm3, 4933427D14Rik, Txnl5, Med31, 4930563E22Rik, Slc13a5, Fbxo39, LOC628100, Tekt1, D130058I21Rik, Ggt6, Mybbp1a, 9830002I17Rik, LOC432577, Ube2g1, Ankfy1, Cyb5d2, LOC627119
Downstream geneAtp2a3, P2rx1, LOC100043309, Camkk1, 1200014J11Rik, Itgae, Gsg2, P2rx5, Tmem93, Tax1bp3, Ctns, Carkl, Trpv1, Trpv3, Aspa, Spata22, Olfr20, Olfr376, Olfr377-ps1, Olfr1, Olfr75-ps1, Olfr378, Olfr379-ps1, Olfr380, Olfr381, Olfr382, Olfr383-ps1, Olfr385, Olfr386, Olfr387-ps1, 1700012C15Rik, Olfr388-ps1, Olfr389, Olfr390, Olfr391-ps1, Olfr392, Olfr393, Olfr394, Olfr395, Olfr396-ps1, Olfr23
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131A17.bB6Ng01-131A17.g
ACCDH932202DH932203
length1,097906
definitionDH932202|Mus musculus domesticus DNA, BAC clone: B6Ng01-131A17, 5' end.DH932203|Mus musculus domesticus DNA, BAC clone: B6Ng01-131A17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,693,643 - 72,694,741)(72,756,615 - 72,757,523)
sequence
gaattctaggacagagagttccaggactatccagaggacacctctgacac
acacacacacacacacacacacacacacacacacacctcaaaaaaaaaag
taaaaagaaaagtttaatactaaagtcatcaataaagaaagaacagcttg
ggggccatgttggtttggagaaggctaactgaggtaacttatggaaggtg
tgtaacatacatagcatggcacgctcgtggagtggggtgggtgctttgtt
tgattaacagatgagtagttgtcaactctgtacttctgctggactgttct
ctcaacccaactggacttgaatgtcactgtccctgtttccctccaagtca
tttaactggttgctttttggttgttttgtgtaagaaattgagatcaataa
gttgcagctgatggtgtcttctgtttccagttactttggacacttggaag
gctgtggtgctgatctacacagagaaatccgagacacttactatcaactt
gttctgtttttggtcaaagcaatcaaaagatttagtagcataaatgacag
gtactggattacctttatatttcttgagggaaaaaatgtatcttttttct
aattataaatgaaatacatatttgaagttgaaaatcaaaaaaaaaaaacc
cacaagattaagcacaagtaattcactgatagcctgttatcttcagtgtc
tgatatattacgtgcagattaaaacttgagtacaaagcagattcttgtct
cctctatagtaagtcattcagacataaaccttaaatcaaatggctcttct
gtaactgcataaccttggctaattgggagtgattctaatattgccgtcat
cagcaggcgaccttgctgcctcttcccttcactgtcagatgcccctagtg
tcagactcactttccatttttcagagttgttcttggtttttgtttgtttt
taagatttgaaggatgtttatgcagaatcctcccttacaaattagtacca
aaacaggctgccaacttacactgtcctgtgtcagtatgcagctaagataa
ctgtcacctgtgtgtctctctaggtctctgctctctgctttatcttg
gaattcagtttctagttctaggaaaaggcatatatatatatgtgtatgtg
tgtgtgtgtgtgtgtgtgtgtgtattctttccttagcctcctagtgttgg
gattacaggtgtgcaccatgacacgggacttgagaaaacattctttaaac
attgcagcgtattggcagaggaggcaaaaggtacatgaatgttcttccat
aggagaaacattaagacgtttggaagcagacgctaagcacttccccccga
attaagtcccacagcttgctcttcttacagggagagatttgcatggggga
ctttagaaagtctttagggactttgcacagggaaagatcagcaagactgg
cccactgcttgggaactatagcccaggctgtgcccagcctggcgtcagga
gctggctgagcagtggcttccattcttcacagcagagcaaggttacctgt
ggacctcccaggagacctggctccaagctctattagttaggtctctttgg
cggtaaatgagagaaactcaatgagatgctctaacatctgatgagcgaaa
atgaggccatcttaactcatgcaactgtcagagaggctgaagaaaacatg
ctggtgctctctggccttaggcgcttgtaggcctgcagactcgcccccgg
aagctccatctcagaaatggcctctcacgtgcacaggcctggaggctcca
ctcagcttggagcggggcacgaggcctgcatgggccacagggcgagcgtg
tgaggccggcaatccagggctgcgtgtgactcagacctagggggctgccc
ggctaagaagtgggcagctcctgtttgttcaaaacttcagcctctcagca
atctgtaaaaaacacccttccagcaggaaaatggccacatcgtccagcct
gcagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_72693643_72694741
seq2: B6Ng01-131A17.b_47_1143

seq1  GAATTCTAGGACAGAGAGTTCCAGGACTATCCAGAGGACACCTCTGACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGACAGAGAGTTCCAGGACTATCCAGAGGACACCTCTGACAC  50

seq1  ACACACACACACACACACACACACACACACACACACCTCAAAAAAAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACCTCAAAAAAAAAAG  100

seq1  TAAAAAGAAAAGTTTAATACTAAAGTCATCAATAAAGAAAGAACAGCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAAAAGTTTAATACTAAAGTCATCAATAAAGAAAGAACAGCTTG  150

seq1  GGGGCCATGTTGGTTTGGAGAAGGCTAACTGAGGTAACTTATGGAAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCATGTTGGTTTGGAGAAGGCTAACTGAGGTAACTTATGGAAGGTG  200

seq1  TGTAACATACATAGCATGGCACGCTCGTGGAGTGGGGTGGGTGCTTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACATACATAGCATGGCACGCTCGTGGAGTGGGGTGGGTGCTTTGTT  250

seq1  TGATTAACAGATGAGTAGTTGTCAACTCTGTACTTCTGCTGGACTGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAACAGATGAGTAGTTGTCAACTCTGTACTTCTGCTGGACTGTTCT  300

seq1  CTCAACCCAACTGGACTTGAATGTCACTGTCCCTGTTTCCCTCCAAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCCAACTGGACTTGAATGTCACTGTCCCTGTTTCCCTCCAAGTCA  350

seq1  TTTAACTGGTTGCTTTTTGGTTGTTTTGTGTAAGAAATTGAGATCAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTGGTTGCTTTTTGGTTGTTTTGTGTAAGAAATTGAGATCAATAA  400

seq1  GTTGCAGCTGATGGTGTCTTCTGTTTCCAGTTACTTTGGACACTTGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAGCTGATGGTGTCTTCTGTTTCCAGTTACTTTGGACACTTGGAAG  450

seq1  GCTGTGGTGCTGATCTACACAGAGAAATCCGAGACACTTACTATCAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGTGCTGATCTACACAGAGAAATCCGAGACACTTACTATCAACTT  500

seq1  GTTCTGTTTTTGGTCAAAGCAATCAAAAGATTTAGTAGCATAAATGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTTTTGGTCAAAGCAATCAAAAGATTTAGTAGCATAAATGACAG  550

seq1  GTACTGGATTACCTTTATATTTCTTGAGGGAAAAAATGTATCTTTTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGATTACCTTTATATTTCTTGAGGGAAAAAATGTATCTTTTTTCT  600

seq1  AATTATAAATGAAATACATATTTGAAGTTGAAAATCAAAAAAAAAAAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAAATGAAATACATATTTGAAGTTGAAAATCAAAAAAAAAAAACC  650

seq1  CACAAGATTAAGCACAAGTAATTCACTGATAGCCTGTTATCTTCAGTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGATTAAGCACAAGTAATTCACTGATAGCCTGTTATCTTCAGTGTC  700

seq1  TGATATATTACGTGCAGATTAAAACTTGAGTACAAAGCAGATTCTTGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATATTACGTGCAGATTAAAACTTGAGTACAAAGCAGATTCTTGTCT  750

seq1  CCTCTATAGTAAGTCATTCAGACATAAACCTTAAATCAAATGGCTCTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATAGTAAGTCATTCAGACATAAACCTTAAATCAAATGGCTCTTCT  800

seq1  GTAACTGCATAACCTTGGCTAATTGGGAGTGATTCTAATATTGCCGTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTGCATAACCTTGGCTAATTGGGAGTGATTCTAATATTGCCGTCAT  850

seq1  CAGCAGGCGACCTTGCTGCCTCTT-CCTTCACTGTCAGATGCCCCTAGTG  899
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAGCAGGCGACCTTGCTGCCTCTTCCCTTCACTGTCAGATGCCCCTAGTG  900

seq1  TCAGACTCACTTTCCATCTTTCAGAGTTGTTCTTGGTTTTTGTTTGTTTT  949
      ||||||||||||||||| |||||||||||||||||||||||||||| |||
seq2  TCAGACTCACTTTCCATTTTTCAGAGTTGTTCTTGGTTTTTGTTTG-TTT  949

seq1  TTAAGATTTGAAGGATGTTTATGCAGAATCCTCCCTTACAAATTAGTACC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATTTGAAGGATGTTTATGCAGAATCCTCCCTTACAAATTAGTACC  999

seq1  AAAACAGGCTGCCAACTTACACTGTCCTGTTGTCAGTATGCAGCTTAGAT  1049
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  AAAACAGGCTGCCAACTTACACTGTCCTG-TGTCAGTATGCAGCTAAGAT  1048

seq1  AACTGTCACCTGTGTGGTCTCTCTAGGTCTCTGCTCCCTGCTTTATCTTG  1099
      ||||||||||||||| |||||||||||||||||||| |||||||||||||
seq2  AACTGTCACCTGTGT-GTCTCTCTAGGTCTCTGCTCTCTGCTTTATCTTG  1097

seq1: chr11_72756615_72757523
seq2: B6Ng01-131A17.g_67_972 (reverse)

seq1  CACTGCAGGCTGGACGATGTGGCCA-TTTCCTGCTGGAAGGGTTGTTTTT  49
      ||||||||||||||||||||||||| |||||||||||||||||   ||||
seq2  CACTGCAGGCTGGACGATGTGGCCATTTTCCTGCTGGAAGGGT--GTTTT  48

seq1  TTCCAGGTTGCCTGAGAGGCTGAAGGTTTGGAACAAACAGGAGCTGCCCA  99
      || ||| ||| ||||||||||||| |||| ||||||||||||||||||||
seq2  TTACAGATTG-CTGAGAGGCTGAA-GTTTTGAACAAACAGGAGCTGCCCA  96

seq1  CTTCTTAGCCGGGCAGCCCCCTAGGTCTGAGTCACACGCAGCCCTGGATT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAGCCGGGCAGCCCCCTAGGTCTGAGTCACACGCAGCCCTGGATT  146

seq1  GCCGGCCTCACACGCTCGCCCTGTGGCCCATGCAGGCCTCGTGCCCCGCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGCCTCACACGCTCGCCCTGTGGCCCATGCAGGCCTCGTGCCCCGCT  196

seq1  CCAAGCTGAGTGGAGCCTCCAGGCCTGTGCACGTGAGAGGCCATTTCTGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTGAGTGGAGCCTCCAGGCCTGTGCACGTGAGAGGCCATTTCTGA  246

seq1  GATGGAGCTTCCGGGGGCGAGTCTGCAGGCCTACAAGCGCCTAAGGCCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGCTTCCGGGGGCGAGTCTGCAGGCCTACAAGCGCCTAAGGCCAG  296

seq1  AGAGCACCAGCATGTTTTCTTCAGCCTCTCTGACAGTTGCATGAGTTAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACCAGCATGTTTTCTTCAGCCTCTCTGACAGTTGCATGAGTTAAG  346

seq1  ATGGCCTCATTTTCGCTCATCAGATGTTAGAGCATCTCATTGAGTTTCTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTCATTTTCGCTCATCAGATGTTAGAGCATCTCATTGAGTTTCTC  396

seq1  TCATTTACCGCCAAAGAGACCTAACTAATAGAGCTTGGAGCCAGGTCTCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTACCGCCAAAGAGACCTAACTAATAGAGCTTGGAGCCAGGTCTCC  446

seq1  TGGGAGGTCCACAGGTAACCTTGCTCTGCTGTGAAGAATGGAAGCCACTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGTCCACAGGTAACCTTGCTCTGCTGTGAAGAATGGAAGCCACTG  496

seq1  CTCAGCCAGCTCCTGACGCCAGGCTGGGCACAGCCTGGGCTATAGTTCCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCAGCTCCTGACGCCAGGCTGGGCACAGCCTGGGCTATAGTTCCC  546

seq1  AAGCAGTGGGCCAGTCTTGCTGATCTTTCCCTGTGCAAAGTCCCTAAAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTGGGCCAGTCTTGCTGATCTTTCCCTGTGCAAAGTCCCTAAAGA  596

seq1  CTTTCTAAAGTCCCCCATGCAAATCTCTCCCTGTAAGAAGAGCAAGCTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAAAGTCCCCCATGCAAATCTCTCCCTGTAAGAAGAGCAAGCTGT  646

seq1  GGGACTTAATTCGGGGGGAAGTGCTTAGCGTCTGCTTCCAAACGTCTTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTAATTCGGGGGGAAGTGCTTAGCGTCTGCTTCCAAACGTCTTAA  696

seq1  TGTTTCTCCTATGGAAGAACATTCATGTACCTTTTGCCTCCTCTGCCAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCCTATGGAAGAACATTCATGTACCTTTTGCCTCCTCTGCCAAT  746

seq1  ACGCTGCAATGTTTAAAGAATGTTTTCTCAAGTCCCGTGTCATGGTGCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTGCAATGTTTAAAGAATGTTTTCTCAAGTCCCGTGTCATGGTGCAC  796

seq1  ACCTGTAATCCCAACACTAGGAGGCTAAGGAAAGAATACACACACACACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAATCCCAACACTAGGAGGCTAAGGAAAGAATACACACACACACA  846

seq1  CACACACACACACATACACATATATATATATGCCTTTTCCTAGAACTAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACATACACATATATATATATGCCTTTTCCTAGAACTAGA  896

seq1  AACTGAATTC  909
      ||||||||||
seq2  AACTGAATTC  906