BAC Information

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BAC

Clone NameB6Ng01-131L03
Chromosome11 (Build37)
Map Location 94,662,816 - 94,663,716
singlet/doubletsinglet
Overlap geneLOC544807
Upstream geneUtp18, Mbtd1, Nme2, Nme1, Spag9, LOC100039431, LOC100039440, Tob1, Wfikkn2, 3300001P08Rik, Ankrd40, Abcc3, Cacna1g, Spata20, Epn3, Mycbpap, Rsad1, BC018371, Chad, Lrrc59, Eme1, Mrpl27, Xylt2, OTTMUSG00000002038, Cdc34-ps, A430060F13Rik, Tmem92, LOC100039410
Downstream geneLOC544808, LOC665174, LOC432591, LOC100039739, Col1a1, Sgca, Hils1, Ppp1r9b, Samd14, Pdk2, Itga3, Dlx3, Dlx4, LOC100039437, Tac4, Myst2, 5730593F17Rik, Slc35b1, Spop, LOC100039483, Nxph3, Ngfr, Phb, 1110035M17Rik, Zfp652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131L03.bB6Ng01-131L03.g
ACCDH932686DH932687
length1,281901
definitionDH932686|Mus musculus domesticus DNA, BAC clone: B6Ng01-131L03, 5' end.DH932687|Mus musculus domesticus DNA, BAC clone: B6Ng01-131L03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgagcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagatgag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccacgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagcagtagccagg
tcagctttggtgagtggaagcccgtgttgctgagcccaagcataacctcc
atctcgaccaccatgaccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgactgtccacagaacgggtcatcttatcc
acttgattattgaactcctcctcggctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtcttttctcaccaattttccaattgtg
atctttccaagtgcctgaccatccagccaatccattggcttacagcccat
gagtcagtgaataatcgtacatctggccattttcttcttgcaaacaaact
gtaataccatgtgtactgcacgaagttctgcccactgtgaagatttccct
tcacctgtgtctttcaaggttgtcccagaaaggggttgtatgctgcagct
gtcacttcttgggtggtgcctgcataacgtgcagagccatcagtaaacca
ggctctagtcttctcttcttcggtcagttgatcatagggaacacccccat
gaagcttataagcgcatgcttggcagcagatggcattgtacaggagtaga
aaccataaggcttttgagcaacttcttcatgtaactggcttgtggccttc
aggacctgctctggcccgatcacgtaatatccacttcaatgaataataga
ctgtcgtctgtgcccgttccactttaatgaactgcaggactgtaaagatc
aagctcatagagggtaattcaagtccaatgaaaacttgtgggtccaattg
tcacggttcagattttcctttaggccatacaggtccaagtgaccgtattt
caaggtgaaaataaatggttctgtccggtag
gaattcactcagtagaccaggctagccttgaactcagaaatcctcttgcc
tctgcatcccaagagctggaattaaaggcatgtggcaccacttccggcct
ataaatctttaaaaagataaaaataaaaagacttgtgataccaccacctg
gggttttttgtttgtttgtttgtttgtttttgtttttgttttttcattta
atccaggctctggtctggattggatctcactaattagatcatactagctt
tgaactcacagagatttgcctcctccctgatgggattaaaggctgtgtca
ccacgccctgctctatccactatttaagcacagccaagcagagggacttc
cacagtgctctcctccatccaacctacgaggctggtaaatcaacgtcttc
taacctcccacctcccagttcctcaaactcaagcaaggccagctcctctc
cacttctcttccctgagctcctgttcagcttgcagccctggtccagccaa
ctccagtgtgttaactctgggcctatcctgaggctggccccataggtgga
gagaagtggaaaaggtcctgccctgtcactctgtccttacactctgaaga
tcagtggcccccttgacaggatgctggacgcctggatctggggcacactc
accttgacctttggcctgctttccagtctccaaggagtaagtgccaacaa
ggtaagtgagacttctatgacttttgaggacccaaaggggcagaggcctg
cctaggaacccagtcctcaacttaacttgtcatgaataccttaaccacag
gcaattggaaacttcctgtctgttgtgtttttgggaaaggtaggtaggga
cctcagagggtggttatggggaaacatgggtccccatctgggcagggctg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_94662816_94663716
seq2: B6Ng01-131L03.g_70_970 (reverse)

seq1  ACAGCCCTGCCAAGATGGGGA-CCATGTTTCCCCATAGCCTCCCTCTGAG  49
      ||||||||||| ||||||||| ||||||||||||||| || |||||||||
seq2  ACAGCCCTGCCCAGATGGGGACCCATGTTTCCCCATAACCACCCTCTGAG  50

seq1  GTCCCTACCTACCCTTTCCCAAAACACAACAGACAGGAAGTTTCCAATTG  99
      ||||||||||||| || || ||||||||||||||||||||||||||||||
seq2  GTCCCTACCTACCTTTCCCAAAAACACAACAGACAGGAAGTTTCCAATTG  100

seq1  CCTGTGGTTAAGGTTATTCCTGACAAGTTAAGTTGAGGACTGGGTTCCTA  149
      ||||||||||||| ||||| ||||||||||||||||||||||||||||||
seq2  CCTGTGGTTAAGG-TATTCATGACAAGTTAAGTTGAGGACTGGGTTCCTA  149

seq1  GGCAGGCCTCTGCCCCTTTGGGTCCTCAAAAGTCATAGAAGTCTCACTTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCCTCTGCCCCTTTGGGTCCTCAAAAGTCATAGAAGTCTCACTTA  199

seq1  CCTTGTTGGCACTTACTCCTTGGAGACTGGAAAGCAGGCCAAAGGTCAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTGGCACTTACTCCTTGGAGACTGGAAAGCAGGCCAAAGGTCAAG  249

seq1  GTGAGTGTGCCCCAGATCCAGGCGTCCAGCATCCTGTCAAGGGGGCCACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGTGCCCCAGATCCAGGCGTCCAGCATCCTGTCAAGGGGGCCACT  299

seq1  GATCTTCAGAGTGTAAGGACAGAGTGACAGGGCAGGACCTTTTCCACTTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCAGAGTGTAAGGACAGAGTGACAGGGCAGGACCTTTTCCACTTC  349

seq1  TCTCCACCTATGGGGCCAGCCTCAGGATAGGCCCAGAGTTAACACACTGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACCTATGGGGCCAGCCTCAGGATAGGCCCAGAGTTAACACACTGG  399

seq1  AGTTGGCTGGACCAGGGCTGCAAGCTGAACAGGAGCTCAGGGAAGAGAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCTGGACCAGGGCTGCAAGCTGAACAGGAGCTCAGGGAAGAGAAG  449

seq1  TGGAGAGGAGCTGGCCTTGCTTGAGTTTGAGGAACTGGGAGGTGGGAGGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGGAGCTGGCCTTGCTTGAGTTTGAGGAACTGGGAGGTGGGAGGT  499

seq1  TAGAAGACGTTGATTTACCAGCCTCGTAGGTTGGATGGAGGAGAGCACTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGACGTTGATTTACCAGCCTCGTAGGTTGGATGGAGGAGAGCACTG  549

seq1  TGGAAGTCCCTCTGCTTGGCTGTGCTTAAATAGTGGATAGAGCAGGGCGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTCCCTCTGCTTGGCTGTGCTTAAATAGTGGATAGAGCAGGGCGT  599

seq1  GGTGACACAGCCTTTAATCCCATCAGGGAGGAGGCAAATCTCTGTGAGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACACAGCCTTTAATCCCATCAGGGAGGAGGCAAATCTCTGTGAGTT  649

seq1  CAAAGCTAGTATGATCTAATTAGTGAGATCCAATCCAGACCAGAGCCTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTAGTATGATCTAATTAGTGAGATCCAATCCAGACCAGAGCCTGG  699

seq1  ATTAAATGAAAAAACAAAAACAAAAACAAACAAACAAACAAACAAAAAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATGAAAAAACAAAAACAAAAACAAACAAACAAACAAACAAAAAAC  749

seq1  CCCAGGTGGTGGTATCACAAGTCTTTTTATTTTTATCTTTTTAAAGATTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTGGTGGTATCACAAGTCTTTTTATTTTTATCTTTTTAAAGATTT  799

seq1  ATAGGCCGGAAGTGGTGCCACATGCCTTTAATTCCAGCTCTTGGGATGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCCGGAAGTGGTGCCACATGCCTTTAATTCCAGCTCTTGGGATGCA  849

seq1  GAGGCAAGAGGATTTCTGAGTTCAAGGCTAGCCTGGTCTACTGAGTGAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAGAGGATTTCTGAGTTCAAGGCTAGCCTGGTCTACTGAGTGAAT  899

seq1  TC  901
      ||
seq2  TC  901