BAC Information

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BAC

Clone NameB6Ng01-133D14
Chromosome11 (Build37)
Map Location 57,835,378 - 57,986,738
singlet/doubletdoublet
Overlap geneLarp1, LOC676527, LOC667947, Cnot8, Gemin5, Mrpl22
Upstream geneGria1, LOC667878, 1810073G14Rik, Mfap3, Galnt10, Sap30l, Hand1, LOC624605
Downstream geneIrgb10, Igtp, LOC263305, LOC100041816, EG668249, 4930438A08Rik, Zfp692, Zfp672, 1700047K16Rik, Sh3bp5l, 2210415F13Rik, LOC624814, 1810065E05Rik, OTTMUSG00000005737, 4930504O13Rik, Olfr30, Olfr333-ps1, Olfr332, Olfr331, Olfr330, Olfr329, Olfr328, Olfr327-ps1, Olfr325, Olfr324, 2210407C18Rik, Olfr323, Trim58, Olfr216, OTTMUSG00000005755, Olfr320, LOC668058, Olfr319, Olfr318, Olfr317, Olfr316, Olfr315, Olfr314, 3100002J23Rik, Olfr313, Olfr312, GA_x5J8B7W3UM0-1747565-1747342, Olfr311, 2810021J22Rik, Zfp39, Butr1, Rnf187, LOC676691, Hist3h2ba, Hist3h2bb, Hist3h2a, LOC382523, Trim17, Trim11, Obscn, A230051G13Rik, 4930543L23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133D14.bB6Ng01-133D14.g
ACCDH933824DH933825
length1,2001,039
definitionDH933824|Mus musculus domesticus DNA, BAC clone: B6Ng01-133D14, 5' end.DH933825|Mus musculus domesticus DNA, BAC clone: B6Ng01-133D14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,985,542 - 57,986,738)(57,835,378 - 57,836,421)
sequence
gaattcaaaaccagcataagacccgactcaaaagaaattaaaaatagatt
taaaaactaggggattacttctccctacaaacttaccgctggtctccgag
gttcgccaggcagttgaggtgggtaaacaatcttattcttcttctcccat
ttgcgagaaatgtcaagagaagcactcgtgtggatgcacgacgggggtaa
aaccctgaaaggaaggaagcccataagacaacagaaacttggacctctct
gccgttctgggagccacgtcaccaccacccttatccagacactacagagc
tggctcgtctcccatccagatacacctgcaatctctaggccttcaaactt
tcttctccagtttgaatcactggtgtttacattttacatagttaaagcca
gcggcacactgtcacttcactgggccttggttttcatgtatgtaagaaag
aggaaagaggcaatgtctctaaggcctctaacatcattttatatcatcac
tcacagcagggtgacagaaccataagctgctcaactctgacttcaatctt
tcaaagaagccattaggataaactattaaacaagattttgtgagcgtgag
gtacctactgtctgccatcccttagaaactgccttgcatttctcaaaacc
tcaatacagatttggcaatcaatatggtgtctggtaaattaagtatgcca
tgaattaacagtgacaaagtttcatgaatacttacaggttttatgaatac
tcacgactgaaatgggttttaaacggaatcaaacaactataattatatta
tgtcaaaatattgctccaaagaagcaattcatttgcaagtactatatatg
taatcgaaacttcggatgtaccctacggatccatgccagtgctaactcaa
ctgcatagggacgcttgttgtcctagcaggacagtgcatggcctaggatc
ccagcctctgactggtaagcagaagccagactgacttatggcgagaattc
aaacaaacaaacaaaaggcttttctcgagaaggctctctgaatgtttctg
caagagcaaaaggcctcaaatttcagttgctgagaaacaacagcgaacga
attacaatgtcagcagtctcgagtcttcaaacagtccttgcccacggcag
tgaattaagaaataaccaggaagtttgttgtatagcacaacaaagtcgaa

gaattctgccgtgcactagatagagaggcctggcctcattgtttacattc
ccacagggaagcagtgaactaccaattttcatttcctgcctaacatcacc
tcccaaaacagcagcttaaagaatcagccatcttgagggtgtggaataca
gtcctgttatcccagctactctggaatcaattttcatagggaggtattgg
gcagaggctgttaaggtgttggcatgatcagaaggatcatcctagccaga
gtgcagtcaggatcctccaaggacagaaatggccagtgtagatgaggagg
cctcagctttacaggggctctgcactctgttgtggaggctggagagcagt
ggctgcagcagatgctttgagattcctcagatccgtggagagtgttgagt
ggggagcaaggtggaagcagaaaggcctgcaggaaatgcaggtaaatcag
agtagaagataaggagctacttgtagctggacgttcattctctgcttcct
ttctctcctcccccattttgatacttagtaacaaaaaatgttccagacaa
ggattgagccaaaattacaagattaagtaagggttaaagttgtttttagc
tctgtttcttaagagactttaagcagtcagaaagttgttttgtttggtct
aaaacaggacttgaatcatggtattcaagtgagatttcaacagaaaattt
ttcttttgttttctgtcaaagcagaatgtaatcaggattttcatttgtac
ctgtaagttaggaaatgtgtgggcctggagaagaaggttcaaccagttaa
cagcacttgctattcttgcagaggaccccagatgtgtttcttgtacccac
tagggctggttcatggtctttgtaactttagctccagggtacctaatgcc
ctcttaccctctgagggccactgcactcagtgagtatacacgcatgcatg
tgaacacatattttaaaatttaatttaatttatttattatttgtagtaca
ctgtagctgtcttcagatctcatatgggtggttgtgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_57985542_57986738
seq2: B6Ng01-133D14.b_47_1246 (reverse)

seq1  TTCGACTTTG-TGTGCTATACCAACAAACATTCCTGGTTATTTCTTTATT  49
      |||||||||| ||||||||| |||||||| |||||||||||||||| |||
seq2  TTCGACTTTGTTGTGCTATA-CAACAAAC-TTCCTGGTTATTTCTTAATT  48

seq1  CACTTGCCGTGGGCAAGGACTGTTTGGAGACTCGAGGCTTGCCTGACATT  99
      ||| |||||||||||||||||||||| ||||||||| ||   ||||||||
seq2  CAC-TGCCGTGGGCAAGGACTGTTTGAAGACTCGAGACT--GCTGACATT  95

seq1  GTACATTCGTTCGCTGTTGTTTCTCAGCAACTGGAGTTTGA-GCCTTTTG  148
      ||| ||||||||||||||||||||||||||||| | ||||| ||||||||
seq2  GTA-ATTCGTTCGCTGTTGTTTCTCAGCAACTGAAATTTGAGGCCTTTTG  144

seq1  CTC-TGCAG-AACATTCTG-GAGCC-TCTCGAG-AAAGCCTTTTGTTTGT  193
      ||| ||||| ||||||| | ||||| ||||||| ||||||||||||||||
seq2  CTCTTGCAGAAACATTCAGAGAGCCTTCTCGAGAAAAGCCTTTTGTTTGT  194

seq1  TTGTTTG-AGTCTCGCCATAAGTCAGTCTGGCTTCTGCTTACCAGTCAGA  242
      ||||||| | ||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGAATTCTCGCCATAAGTCAGTCTGGCTTCTGCTTACCAGTCAGA  244

seq1  GGCTGGGATCCTAGGCCATGCACTGTCCTGCTAGGAC-ACAAGCGTCCCT  291
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGCTGGGATCCTAGGCCATGCACTGTCCTGCTAGGACAACAAGCGTCCCT  294

seq1  ATGCAGTTGAGTTAGCACTGGCATGGATCCGTAGGGTACATCCGAAGTTT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTTGAGTTAGCACTGGCATGGATCCGTAGGGTACATCCGAAGTTT  344

seq1  CGATTACATATATAGTACTTGCAAATGAATTGCTTCTTTGGAGCAATATT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTACATATATAGTACTTGCAAATGAATTGCTTCTTTGGAGCAATATT  394

seq1  TTGACATAATATAATTATAGTTGTTTGATTCCGTTTAAAACCCATTTCAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATAATATAATTATAGTTGTTTGATTCCGTTTAAAACCCATTTCAG  444

seq1  TCCTGAGTATTCATAAAACCTGTAAGTATTCATGAAACTTTGTCACTGTT  491
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGAGTATTCATAAAACCTGTAAGTATTCATGAAACTTTGTCACTGTT  494

seq1  AATTCATGGCATACTTAATTTACCAGACACCATATTGATTGCCAAATCTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATGGCATACTTAATTTACCAGACACCATATTGATTGCCAAATCTG  544

seq1  TATTGAGGTTTTGAGAAATGCAAGGCAGTTTCTAAGGGATGGCAGACAGT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAGGTTTTGAGAAATGCAAGGCAGTTTCTAAGGGATGGCAGACAGT  594

seq1  AGGTACCTCACGCTCACAAAATCTTGTTTAATAGTTTATCCTAATGGCTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACCTCACGCTCACAAAATCTTGTTTAATAGTTTATCCTAATGGCTT  644

seq1  CTTTGAAAGATTGAAGTCAGAGTTGAGCAGCTTATGGTTCTGTCACCCTG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAAGATTGAAGTCAGAGTTGAGCAGCTTATGGTTCTGTCACCCTG  694

seq1  CTGTGAGTGATGATATAAAATGATGTTAGAGGCCTTAGAGACATTGCCTC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGTGATGATATAAAATGATGTTAGAGGCCTTAGAGACATTGCCTC  744

seq1  TTTCCTCTTTCTTACATACATGAAAACCAAGGCCCAGTGAAGTGACAGTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTTTCTTACATACATGAAAACCAAGGCCCAGTGAAGTGACAGTG  794

seq1  TGCCGCTGGCTTTAACTATGTAAAATGTAAACACCAGTGATTCAAACTGG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGCTGGCTTTAACTATGTAAAATGTAAACACCAGTGATTCAAACTGG  844

seq1  AGAAGAAAGTTTGAAGGCCTAGAGATTGCAGGTGTATCTGGATGGGAGAC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAGTTTGAAGGCCTAGAGATTGCAGGTGTATCTGGATGGGAGAC  894

seq1  GAGCCAGCTCTGTAGTGTCTGGATAAGGGTGGTGGTGACGTGGCTCCCAG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGCTCTGTAGTGTCTGGATAAGGGTGGTGGTGACGTGGCTCCCAG  944

seq1  AACGGCAGAGAGGTCCAAGTTTCTGTTGTCTTATGGGCTTCCTTCCTTTC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGCAGAGAGGTCCAAGTTTCTGTTGTCTTATGGGCTTCCTTCCTTTC  994

seq1  AGGGTTTTACCCCCGTCGTGCATCCACACGAGTGCTTCTCTTGACATTTC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTTACCCCCGTCGTGCATCCACACGAGTGCTTCTCTTGACATTTC  1044

seq1  TCGCAAATGGGAGAAGAAGAATAAGATTGTTTACCCACCTCAACTGCCTG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAAATGGGAGAAGAAGAATAAGATTGTTTACCCACCTCAACTGCCTG  1094

seq1  GCGAACCTCGGAGACCAGCGGTAAGTTTGTAGGGAGAAGTAATCCCCTAG  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAACCTCGGAGACCAGCGGTAAGTTTGTAGGGAGAAGTAATCCCCTAG  1144

seq1  TTTTTAAATCTATTTTTAATTTCTTTTGAGTCGGGTCTTATGCTGGTTTT  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAATCTATTTTTAATTTCTTTTGAGTCGGGTCTTATGCTGGTTTT  1194

seq1  GAATTC  1197
      ||||||
seq2  GAATTC  1200

seq1: chr11_57835378_57836421
seq2: B6Ng01-133D14.g_68_1106

seq1  GAATTCTGCCGTGCACTAGATAGAGAGGCCTGGCCTCATTGTTTACATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCGTGCACTAGATAGAGAGGCCTGGCCTCATTGTTTACATTC  50

seq1  CCACAGGGAAGCAGTGAACTACCAATTTTCATTTCCTGCCTAACATCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGGGAAGCAGTGAACTACCAATTTTCATTTCCTGCCTAACATCACC  100

seq1  TCCCAAAACAGCAGCTTAAAGAATCAGCCATCTTGAGGGTGTGGAATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAACAGCAGCTTAAAGAATCAGCCATCTTGAGGGTGTGGAATACA  150

seq1  GTCCTGTTATCCCAGCTACTCTGGAATCAATTTTCATAGGGAGGTATTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTTATCCCAGCTACTCTGGAATCAATTTTCATAGGGAGGTATTGG  200

seq1  GCAGAGGCTGTTAAGGTGTTGGCATGATCAGAAGGATCATCCTAGCCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCTGTTAAGGTGTTGGCATGATCAGAAGGATCATCCTAGCCAGA  250

seq1  GTGCAGTCAGGATCCTCCAAGGACAGAAATGGCCAGTGTAGATGAGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTCAGGATCCTCCAAGGACAGAAATGGCCAGTGTAGATGAGGAGG  300

seq1  CCTCAGCTTTACAGGGGCTCTGCACTCTGTTGTGGAGGCTGGAGAGCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCTTTACAGGGGCTCTGCACTCTGTTGTGGAGGCTGGAGAGCAGT  350

seq1  GGCTGCAGCAGATGCTTTGAGATTCCTCAGATCCGTGGAGAGTGTTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCAGCAGATGCTTTGAGATTCCTCAGATCCGTGGAGAGTGTTGAGT  400

seq1  GGGGAGCAAGGTGGAAGCAGAAAGGCCTGCAGGAAATGCAGGTAAATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGCAAGGTGGAAGCAGAAAGGCCTGCAGGAAATGCAGGTAAATCAG  450

seq1  AGTAGAAGATAAGGAGCTACTTGTAGCTGGACGTTCATTCTCTGCTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAGATAAGGAGCTACTTGTAGCTGGACGTTCATTCTCTGCTTCCT  500

seq1  TTCTCTCCTCCCCCATTTTGATACTTAGTAACAAAAAATGTTCCAGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCTCCCCCATTTTGATACTTAGTAACAAAAAATGTTCCAGACAA  550

seq1  GGATTGAGCCAAAATTACAAGATTAAGTAAGGGTTAAAGTTGTTTTTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGAGCCAAAATTACAAGATTAAGTAAGGGTTAAAGTTGTTTTTAGC  600

seq1  TCTGTTTCTTAAGAGACTTTAAGCAGTCAGAAAGTTGTTTTGTTTGGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCTTAAGAGACTTTAAGCAGTCAGAAAGTTGTTTTGTTTGGTCT  650

seq1  AAAACAGGACTTGAATCATGGTATTCAAGTGAGATTTCAACAGAAAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGACTTGAATCATGGTATTCAAGTGAGATTTCAACAGAAAATTT  700

seq1  TTCTTTTGTTTTCTGTCAAAGCAGAATGTAATCAGGATTTTCATTTGTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGTTTTCTGTCAAAGCAGAATGTAATCAGGATTTTCATTTGTAC  750

seq1  CTGTAAGTTAGGAAATGTGTGGGCCTGGAGAAGAAGGTTCAACCAGTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGTTAGGAAATGTGTGGGCCTGGAGAAGAAGGTTCAACCAGTTAA  800

seq1  CAGCACTTGCTATTCTTGCAGAGGACCCCAGATGTGTTTCTTGTACCCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTTGCTATTCTTGCAGAGGACCCCAGATGTGTTTCTTGTACCCAC  850

seq1  TAGGGCTGGTTCATGGTCTTTGTAACTTTAGCTCCAGGGTACCTAATGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTGGTTCATGGTCTTTGTAACTTTAGCTCCAGGGTACCTAATGCC  900

seq1  CTCTTACCCTCTGAGGG-CACTGCACTCAGTGAGTATACACGCATGCATG  949
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTCTTACCCTCTGAGGGCCACTGCACTCAGTGAGTATACACGCATGCATG  950

seq1  TGAACACATAATTTTTTAAAATTTAATTTAATTTTATTTATTATATGTAA  999
      ||||||||||   |||||||||||||||||| |||||||||||| ||| |
seq2  TGAACACATA---TTTTAAAATTTAATTTAA-TTTATTTATTATTTGT-A  995

seq1  GTACACTGTAGCTGTCTTCAGATCTCATTATGGGTGGTTGTGAGC  1044
      ||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTACACTGTAGCTGTCTTCAGATCTCA-TATGGGTGGTTGTGAGC  1039