BAC Information

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BAC

Clone NameB6Ng01-133D19
Chromosome11 (Build37)
Map Location 21,884,292 - 21,885,227
singlet/doubletsinglet
Overlap genenone
Upstream genePeli1, Vps54, Ugp2, LOC100042081, 4932414J04Rik, Mdh1, AV249152, Pgam1-ps1, LOC382494, LOC666047
Downstream geneOtx1, Ehbp1, LOC100042146, Tmem17, LOC100042827, LOC100042846, LOC666078, B3gnt2, 9130230N09Rik, Commd1, Zrsr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133D19.bB6Ng01-133D19.g
ACCDH933834DH933835
length754933
definitionDH933834|Mus musculus domesticus DNA, BAC clone: B6Ng01-133D19, 5' end.DH933835|Mus musculus domesticus DNA, BAC clone: B6Ng01-133D19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaaattcttagacaaatgaatggatctggaggatatcatcct
aagttaggtaacccaatcacaaaagaacacatatgatatgcactcactga
taattagatattatcccagaaactcagaatacccaagagagaattcacaa
aacacatgaaactcaataggaaggaagatccaagtgtggacactttgatc
cttcttagaaaggggaataaaatacccattgaaatgagttacagagagaa
agttcagagcagagactgaagaaatgagtctccagagactgccctacttg
gggatccatcccatatataatcaccaaacccagacacgtttttggatgtc
aacaagtgcttgctgataggaccctgatatagctgtaccctgagaggctc
tgccagtgattgacaaatacagaggtgggtcctctccgccaaccattgga
ctgagcataaggtccccaatgaaggagctagagaaaggacagaaggagct
aaaagaaaagagcttacaacgccgtaagaggaagaacaatatgaaccaac
cagtacccctgaagcttccaggtaacaaatcaccaaccaaagagtacaca
tggagggacccatggctccagctgcatatgtaggtagcagagtaggtcat
caatgggaggagaggcccttagtcctgagaaggctcaatgccccagtgta
ggggaatgccaggaaagagaagcaggagtgggttggttggtgagcaggat
gggg
gaattcttctcctccttcctgttcccacacagatttaaccatttccatcc
ccagcttcttctttcacccttcagttcagagcatttgctatggctgtaca
gtgaactagcaaagactttaaagacacaaaatgttcttcagtatttttat
tctcagctcccaggagggcatgatttataataattttccagaatacttaa
gtttaagaattgtgctgactttagtagggcagaaaggaaatatttgcatt
aattaaaaacttatgattaaaaacaaatgtagtttgcacaaataaactca
gccgtactctcctcatttttaaaagggtgatttgttttgaacagatttag
acaacaaagttaaatttattcaaataaattcttagtattgctgaagactt
ctttttcagagaatatagaaagcatattctactttgttgcactttttaca
atactggtctgacagtattataaaatgtattaacttgcagtgtgaagatc
tttgttaagcaatacagtgatgttcaccagtttttggctgcattggtttg
tagactccaagaagaaacaccacttgtggtggtcagcagatctttctcag
gagctcaagcagcataagactccacgcctgggtgctagcagctcggtcgc
atcctctggaggacgctggggtggtgctgaggatatgatgatgtttctat
tgtgttcatatttactgattttatacacacacacacacacacagagagag
agagagagagagagagagagagagagagagagagagagagagagagagag
gaaactctcttcattaaggatgcacactgacagagttttttgtttacaga
ttttcagtctcacctggaacttgtgatgttctgcctcggcctcttcctgt
gcaatgagattatagacacagctgggcaagcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_21884292_21885227
seq2: B6Ng01-133D19.g_67_999 (reverse)

seq1  GTGCTTGCCTAGCTTGTGTCTTTAATCTCATTGCACAGGAGGAGGCCGAG  50
      ||||||||| ||| ||||||| |||||||||||||||||| |||||||||
seq2  GTGCTTGCCCAGC-TGTGTCTATAATCTCATTGCACAGGAAGAGGCCGAG  49

seq1  GCAGGAACATCACAAGTTCCAGGTGGACCTGAAAATCTGTAAAACAAAAA  100
      ||| |||||||||||||||||||||   |||||||||||| |||||||||
seq2  GCA-GAACATCACAAGTTCCAGGTGAGACTGAAAATCTGT-AAACAAAAA  97

seq1  ACTCTGTCAGTGTGCAT-CTTAATGAAGAGTGTTTCCTCTCTCTCTCTCT  149
      ||||||||||||||||| |||||||||||| |||||  ||||||||||||
seq2  ACTCTGTCAGTGTGCATCCTTAATGAAGAGAGTTTC--CTCTCTCTCTCT  145

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGT  195

seq1  GTGTGTGTGTGTGTATAAAATCAGT-AATATGAACACAATAGAAACATCA  248
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTATAAAATCAGTAAATATGAACACAATAGAAACATCA  245

seq1  TCATATCCTCAGCACCACCCCAGCGTCCTCCAGAGGATGCGACCGAGCTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCCTCAGCACCACCCCAGCGTCCTCCAGAGGATGCGACCGAGCTG  295

seq1  CTAGCACCCAGGCGTGGAGTCTTATGCTGCTTGAGCTCCTGAGAAAGATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCACCCAGGCGTGGAGTCTTATGCTGCTTGAGCTCCTGAGAAAGATC  345

seq1  TGCTGACCACCACAAGTGGTGTTTCTTCTTGGAGTCTACAAACCAATGCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACCACCACAAGTGGTGTTTCTTCTTGGAGTCTACAAACCAATGCA  395

seq1  GCCAAAAACTGGTGAACATCACTGTATTGCTTAACAAAGATCTTCACACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAAACTGGTGAACATCACTGTATTGCTTAACAAAGATCTTCACACT  445

seq1  GCAAGTTAATACATTTTATAATACTGTCAGACCAGTATTGTAAAAAGTGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTAATACATTTTATAATACTGTCAGACCAGTATTGTAAAAAGTGC  495

seq1  AACAAAGTAGAATATGCTTTCTATATTCTCTGAAAAAGAAGTCTTCAGCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGTAGAATATGCTTTCTATATTCTCTGAAAAAGAAGTCTTCAGCA  545

seq1  ATACTAAGAATTTATTTGAATAAATTTAACTTTGTTGTCTAAATCTGTTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAGAATTTATTTGAATAAATTTAACTTTGTTGTCTAAATCTGTTC  595

seq1  AAAACAAATCACCCTTTTAAAAATGAGGAGAGTACGGCTGAGTTTATTTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAATCACCCTTTTAAAAATGAGGAGAGTACGGCTGAGTTTATTTG  645

seq1  TGCAAACTACATTTGTTTTTAATCATAAGTTTTTAATTAATGCAAATATT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACTACATTTGTTTTTAATCATAAGTTTTTAATTAATGCAAATATT  695

seq1  TCCTTTCTGCCCTACTAAAGTCAGCACAATTCTTAAACTTAAGTATTCTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTGCCCTACTAAAGTCAGCACAATTCTTAAACTTAAGTATTCTG  745

seq1  GAAAATTATTATAAATCATGCCCTCCTGGGAGCTGAGAATAAAAATACTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTATTATAAATCATGCCCTCCTGGGAGCTGAGAATAAAAATACTG  795

seq1  AAGAACATTTTGTGTCTTTAAAGTCTTTGCTAGTTCACTGTACAGCCATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACATTTTGTGTCTTTAAAGTCTTTGCTAGTTCACTGTACAGCCATA  845

seq1  GCAAATGCTCTGAACTGAAGGGTGAAAGAAGAAGCTGGGGATGGAAATGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGCTCTGAACTGAAGGGTGAAAGAAGAAGCTGGGGATGGAAATGG  895

seq1  TTAAATCTGTGTGGGAACAGGAAGGAGGAGAAGAATTC  936
      ||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCTGTGTGGGAACAGGAAGGAGGAGAAGAATTC  933