BAC Information

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BAC

Clone NameB6Ng01-133H18
Chromosome11 (Build37)
Map Location 103,014,286 - 103,015,158
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem101, Lsm12, G6pc3, Hdac5, BC030867, Asb16, 2010008E23Rik, Ubtf, Slc4a1, Rap2ip, Slc25a39, Grn, BC025575, Itga2b, Mdk-ps1, LOC100040792, Fzd2, 2810433D01Rik, Psmb5-ps, Gm1564, LOC100042456, Ccdc43, Adam11, Gja7, Higd1b, Eftud2, Ccdc103, LOC100042500, Gfap, 3000004C01Rik, C1ql1, Dcakd, Nmt1, Plcd3, Acbd4, Hexim1, Hexim2
Downstream geneFmnl1, 4933400C05Rik, Map3k14, Arhgap27, 5730442P18Rik, Plekhm1, Lrrc37a, Gm884, Lyzl6, Rprml, Gosr2, Wnt9b, Wnt3, Nsf, EG667631, Arf2, LOC100042645, Crhr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133H18.g
ACCDH934019
length893
definitionDH934019|Mus musculus domesticus DNA, BAC clone: B6Ng01-133H18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcagagagatggagcaggacactcaatgccctcctctggttcc
catgtgtgcacacaacactcacatacaaatgcacacagacacacacaggc
acacactcaaaattaaaataaaatacaacttaaaaataaataaagctggc
catagtagcatacacttttaatcccagcacttgggaggcagaggcaggca
gatttctgagttcgaggccagcctggtctacaaagtgagttccaggacag
cctgggctatacacagaaacaactcccccctcaaatatacatatatacac
acacatattatctggatagatggatggatagatagacagaaagacagaca
gacagacagacaatgtcaaaaaatggcagaacacagattgctcttccaga
ggacctgggttgaaacccacgtggcacccataaggtgattcccgaatgtc
tgcaacccttacaattcctgttaaaggggatctgatgccctctttgtctt
tctcaggcaccaggcacacacatgatgtacagacatataagtaggcaaat
tacccatacatacacacacacacacatatatacatataaaattaaaatac
ttttaaaatcaaaatttaaaaagtaacaaggtagagagtagctgagaaat
atagataatattaccctctgaccaccatgtacaccacacccccataccag
catacccccacacacagaggttatagggtaattaaagccctagctttaac
cccagtgtgaaacaagtttgctcacatagcagacagagccaggtctggtg
gcatttgtctgtaatcccagctctagggcaatagagacaagagaatcaca
agttcaagactatgccagccacaatttagagagcagactagag
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_103014286_103015158
seq2: B6Ng01-133H18.g_67_939 (reverse)

seq1  TGTGGCTGGCATAGTCTTGAACTTGTGATTCTCTTGTCTCTATTGCCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTGGCATAGTCTTGAACTTGTGATTCTCTTGTCTCTATTGCCCTA  50

seq1  GAGCTGGGATTACAGACAAATGCCACCAGACCTGGCTCTGTCTGCTATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGGATTACAGACAAATGCCACCAGACCTGGCTCTGTCTGCTATGT  100

seq1  GAGCAAACTTGTTTCACACTGGGGTTAAAGCTAGGGCTTTAATTACCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAACTTGTTTCACACTGGGGTTAAAGCTAGGGCTTTAATTACCCTA  150

seq1  TAACCTCTGTGTGTGGGGGTATGCTGGTATGGGGGTGTGGTGTACATGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTCTGTGTGTGGGGGTATGCTGGTATGGGGGTGTGGTGTACATGGT  200

seq1  GGTCAGAGGGTAATATTATCTATATTTCTCAGCTACTCTCTACCTTGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGAGGGTAATATTATCTATATTTCTCAGCTACTCTCTACCTTGTTA  250

seq1  CTTTTTAAATTTTGATTTTAAAAGTATTTTAATTTTATATGTATATATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAATTTTGATTTTAAAAGTATTTTAATTTTATATGTATATATGT  300

seq1  GTGTGTGTGTGTATGTATGGGTAATTTGCCTACTTATATGTCTGTACATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTATGTATGGGTAATTTGCCTACTTATATGTCTGTACATC  350

seq1  ATGTGTGTGCCTGGTGCCTGAGAAAGACAAAGAGGGCATCAGATCCCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTGCCTGGTGCCTGAGAAAGACAAAGAGGGCATCAGATCCCCTT  400

seq1  TAACAGGAATTGTAAGGGTTGCAGACATTCGGGAATCACCTTATGGGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGGAATTGTAAGGGTTGCAGACATTCGGGAATCACCTTATGGGTGC  450

seq1  CACGTGGGTTTCAACCCAGGTCCTCTGGAAGAGCAATCTGTGTTCTGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGGGTTTCAACCCAGGTCCTCTGGAAGAGCAATCTGTGTTCTGCCA  500

seq1  TTTTTTGACATTGTCTGTCTGTCTGTCTGTCTTTCTGTCTATCTATCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGACATTGTCTGTCTGTCTGTCTGTCTTTCTGTCTATCTATCCAT  550

seq1  CCATCTATCCAGATAATATGTGTGTGTATATATGTATATTTGAGGGGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTATCCAGATAATATGTGTGTGTATATATGTATATTTGAGGGGGGA  600

seq1  GTTGTTTCTGTGTATAGCCCAGGCTGTCCTGGAACTCACTTTGTAGACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTCTGTGTATAGCCCAGGCTGTCCTGGAACTCACTTTGTAGACCA  650

seq1  GGCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGG  700

seq1  GATTAAAAGTGTATGCTACTATGGCCAGCTTTATTTATTTTTAAGTTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAAGTGTATGCTACTATGGCCAGCTTTATTTATTTTTAAGTTGTA  750

seq1  TTTTATTTTAATTTTGAGTGTGTGCCTGTGTGTGTCTGTGTGCATTTGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTAATTTTGAGTGTGTGCCTGTGTGTGTCTGTGTGCATTTGTA  800

seq1  TGTGAGTGTTGTGTGCACACATGGGAACCAGAGGAGGGCATTGAGTGTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTGTTGTGTGCACACATGGGAACCAGAGGAGGGCATTGAGTGTCC  850

seq1  TGCTCCATCTCTCTGCAGAATTC  873
      |||||||||||||||||||||||
seq2  TGCTCCATCTCTCTGCAGAATTC  873