BAC Information

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BAC

Clone NameB6Ng01-134C18
Chromosome11 (Build37)
Map Location 14,216,774 - 14,335,183
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC432535
Downstream gene1700046C09Rik, 1700054H16Rik, LOC100042542, LOC100041673, LOC432537
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134C18.bB6Ng01-134C18.g
ACCDH934536DH934537
length1,146883
definitionDH934536|Mus musculus domesticus DNA, BAC clone: B6Ng01-134C18, 5' end.DH934537|Mus musculus domesticus DNA, BAC clone: B6Ng01-134C18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,334,032 - 14,335,183)(14,216,774 - 14,217,656)
sequence
gaattcataactactaaccaagttttaaaacacttggaaatgaaatgcac
taacttacatatttaaaaatatgtagtagaagatctatcactttggtgca
cattcctgcattgcttaattttggactgagttctgtttctctgatgaggc
tgatgatgatattgggggaaaggatggataggaactcagctaatttgaag
tgattactttgaagcaattgaaatactgatggttggtttttacactccga
gttatataaaatgaaatattattgaataataactaacgctttaaaaaagc
tcttcagattttaaactcataaatgtgttgggtgaaatctatttctaata
tgggtttaagaactgacttaaaacagagcatgcttttgtttcattcatta
atttaatttaagaataattttaaattagaacacagtatattgagtatatg
ggattattgaaccaagtatgacttagtgactttccactccctcatcttct
ccactcccttttatgcctgactccctctccataattccttcttgtcttct
ttcttctttcatgcccacaggccctagtgtcctttacctactttccattc
ttccgtgtcaccaatgataacacatcttgtcctcctttttaaaatgtgca
tgtgtctacatgcattccctaaaagtatggatgcaatctatttttgttat
aagatatgaattctaaacaaaacagtgctaattctatgcatgttgagaag
aaagacaagttctaaatacagtagtttagccaattatcagggatttataa
gtactgtataaactattcaattagactttggtgttacacatttttcttct
gaagaaattcacgcctattcattttgaggccttttttgttgtaaatcatt
ttcttctcaactgaaacatgtcttcctggagggaagatggtgaggctgat
gagactgagaagtcacagtctcacagattctgaaagcagaaacttagagg
atttgaggaccttcaccagattagatgagtactaaacacctgtagaaaga
agagacgcctctagcagcatgaagcagcctctaacaatatttgtaaacaa
tggagctactttgccaggtattcaggagctccacaatgtactactc
gaattcttaatttggaagaaacaggagaaactcttctgtttttttttttt
tttttttctcccaggaaactaattttgatagcttagaggtttaaacaaaa
gatataaaagatacttacattatgtttcttttattgtatcaggaccagag
aataccttgctttcacagtcatctaaataaggcttattggaatattatga
aggacaatagaggggttacaacctttgttgtgcctcaggaactgtttcca
actttatgtaagtttggcagaattaattcttttggctctagagcatatga
gattctttaaggtagaaacagagaacctctgctacattaagtttcagacc
tgaggaaaagagtaaatttatttttaagataaatattcagagacctggga
tgaaagaggccccagggagtctgtgaggatgactgtaactgatacttcta
ttagtgggagttatggattctgaagtggctaccttctgtagccaggcatg
actcccactagaggataaggaaaacaacccatgcttttacccaaaatttg
tcttgcctatcagaaattcagagacaaagctgaagtatagacaaatgtcc
aacggatgattgtcccaacttgagaaacatcacatgcccaagaactaaac
ccttacactatcaatgatactctgctatgcttgcaggcaagaccctagca
tcaccgtcctctgaaagtgaccactcactaaccaatggaaagagatatct
tttcattttggtctttaagttggttacctaacaactggagtggctgtccc
taactctgttgcctgcctggggatcccatttccctaaccaaactgcgttg
tctggcctcagtgggggagaatatgcctggtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_14334032_14335183
seq2: B6Ng01-134C18.b_43_1188 (reverse)

seq1  GAGTAGTACATTGTTGAAGCTCCCTGAATTACTTGC-AAGTAGCTCCATT  49
      ||||||||||||| || |||| |||||||  || || |||||||||||||
seq2  GAGTAGTACATTG-TGGAGCT-CCTGAATACCTGGCAAAGTAGCTCCATT  48

seq1  GTTTAC-AGTATTGTTTAGAGGCTGC-TCATGCTGCTAGA-GCGTCTCTT  96
      |||||| | ||||| ||||||||||| ||||||||||||| |||||||||
seq2  GTTTACAAATATTG-TTAGAGGCTGCTTCATGCTGCTAGAGGCGTCTCTT  97

seq1  CTTTCCTACAGTTGTTTAGTACTCATCTAATCTTGGTGAAGGTCCTCAAA  146
      |||| |||||| |||||||||||||||||||| |||||||||||||| ||
seq2  CTTT-CTACAGGTGTTTAGTACTCATCTAATC-TGGTGAAGGTCCTC-AA  144

seq1  ATCCTCTAAGTTTCTGCTTTTCAGAATCTGTGAGACTTGTTGACTTCCTC  196
      ||||||||||||||||| |||||||||||||||||||   |||||| |||
seq2  ATCCTCTAAGTTTCTGC-TTTCAGAATCTGTGAGACT--GTGACTT-CTC  190

seq1  AGTCTCATCAGCCTCACCATCTTCCCTCCAGGAAGACATGTTTCAGTTGA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCATCAGCCTCACCATCTTCCCTCCAGGAAGACATGTTTCAGTTGA  240

seq1  GAAGAAAATGATTTACAACAAAAAAGGCCTCAAAATGAATAGGCCTGAAT  296
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAAGAAAATGATTTACAACAAAAAAGGCCTCAAAATGAATAGGCGTGAAT  290

seq1  TTCTTCAGAAGAAAAATGTGTAACACCAAAGTCTAATTGAATAGTTTATA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGAAGAAAAATGTGTAACACCAAAGTCTAATTGAATAGTTTATA  340

seq1  CAGTACTTATAAATCCCTGATAATTGGCTAAACTACTGTATTTAGAACTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACTTATAAATCCCTGATAATTGGCTAAACTACTGTATTTAGAACTT  390

seq1  GTCTTTCTTCTCAACATGCATAGAATTAGCACTGTTTTGTTTAGAATTCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCTTCTCAACATGCATAGAATTAGCACTGTTTTGTTTAGAATTCA  440

seq1  TATCTTATAACAAAAATAGATTGCATCCATACTTTTAGGGAATGCATGTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTATAACAAAAATAGATTGCATCCATACTTTTAGGGAATGCATGTA  490

seq1  GACACATGCACATTTTAAAAAGGAGGACAAGATGTGTTATCATTGGTGAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATGCACATTTTAAAAAGGAGGACAAGATGTGTTATCATTGGTGAC  540

seq1  ACGGAAGAATGGAAAGTAGGTAAAGGACACTAGGGCCTGTGGGCATGAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAAGAATGGAAAGTAGGTAAAGGACACTAGGGCCTGTGGGCATGAAA  590

seq1  GAAGAAAGAAGACAAGAAGGAATTATGGAGAGGGAGTCAGGCATAAAAGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGAAGACAAGAAGGAATTATGGAGAGGGAGTCAGGCATAAAAGG  640

seq1  GAGTGGAGAAGATGAGGGAGTGGAAAGTCACTAAGTCATACTTGGTTCAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGAGAAGATGAGGGAGTGGAAAGTCACTAAGTCATACTTGGTTCAA  690

seq1  TAATCCCATATACTCAATATACTGTGTTCTAATTTAAAATTATTCTTAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCATATACTCAATATACTGTGTTCTAATTTAAAATTATTCTTAAA  740

seq1  TTAAATTAATGAATGAAACAAAAGCATGCTCTGTTTTAAGTCAGTTCTTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTAATGAATGAAACAAAAGCATGCTCTGTTTTAAGTCAGTTCTTA  790

seq1  AACCCATATTAGAAATAGATTTCACCCAACACATTTATGAGTTTAAAATC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATATTAGAAATAGATTTCACCCAACACATTTATGAGTTTAAAATC  840

seq1  TGAAGAGCTTTTTTAAAGCGTTAGTTATTATTCAATAATATTTCATTTTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGCTTTTTTAAAGCGTTAGTTATTATTCAATAATATTTCATTTTA  890

seq1  TATAACTCGGAGTGTAAAAACCAACCATCAGTATTTCAATTGCTTCAAAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTCGGAGTGTAAAAACCAACCATCAGTATTTCAATTGCTTCAAAG  940

seq1  TAATCACTTCAAATTAGCTGAGTTCCTATCCATCCTTTCCCCCAATATCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACTTCAAATTAGCTGAGTTCCTATCCATCCTTTCCCCCAATATCA  990

seq1  TCATCAGCCTCATCAGAGAAACAGAACTCAGTCCAAAATTAAGCAATGCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGCCTCATCAGAGAAACAGAACTCAGTCCAAAATTAAGCAATGCA  1040

seq1  GGAATGTGCACCAAAGTGATAGATCTTCTACTACATATTTTTAAATATGT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTGCACCAAAGTGATAGATCTTCTACTACATATTTTTAAATATGT  1090

seq1  AAGTTAGTGCATTTCATTTCCAAGTGTTTTAAAACTTGGTTAGTAGTTAT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGTGCATTTCATTTCCAAGTGTTTTAAAACTTGGTTAGTAGTTAT  1140

seq1  GAATTC  1152
      ||||||
seq2  GAATTC  1146

seq1: chr11_14216774_14217656
seq2: B6Ng01-134C18.g_64_946

seq1  GAATTCTTAATTTGGAAGAAACAGGAGAAACTCTTCTGTTTTTTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATTTGGAAGAAACAGGAGAAACTCTTCTGTTTTTTTTTTTT  50

seq1  TTTTTTTCTCCCAGGAAACTAATTTTGATAGCTTAGAGGTTTAAACAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTCCCAGGAAACTAATTTTGATAGCTTAGAGGTTTAAACAAAA  100

seq1  GATATAAAAGATACTTACATTATGTTTCTTTTATTGTATCAGGACCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAAAGATACTTACATTATGTTTCTTTTATTGTATCAGGACCAGAG  150

seq1  AATACCTTGCTTTCACAGTCATCTAAATAAGGCTTATTGGAATATTATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTTGCTTTCACAGTCATCTAAATAAGGCTTATTGGAATATTATGA  200

seq1  AGGACAATAGAGGGGTTACAACCTTTGTTGTGCCTCAGGAACTGTTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAATAGAGGGGTTACAACCTTTGTTGTGCCTCAGGAACTGTTTCCA  250

seq1  ACTTTATGTAAGTTTGGCAGAATTAATTCTTTTGGCTCTAGAGCATATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATGTAAGTTTGGCAGAATTAATTCTTTTGGCTCTAGAGCATATGA  300

seq1  GATTCTTTAAGGTAGAAACAGAGAACCTCTGCTACATTAAGTTTCAGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTTAAGGTAGAAACAGAGAACCTCTGCTACATTAAGTTTCAGACC  350

seq1  TGAGGAAAAGAGTAAATTTATTTTTAAGATAAATATTCAGAGACCTGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAAAGAGTAAATTTATTTTTAAGATAAATATTCAGAGACCTGGGA  400

seq1  TGAAAGAGGCCCCAGGGAGTCTGTGAGGATGACTGTAACTGATACTTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAGGCCCCAGGGAGTCTGTGAGGATGACTGTAACTGATACTTCTA  450

seq1  TTAGTGGGAGTTATGGATTCTGAAGTGGCTACCTTCTGTAGCCAGGCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGGAGTTATGGATTCTGAAGTGGCTACCTTCTGTAGCCAGGCATG  500

seq1  ACTCCCACTAGAGGATAAGGAAAACAACCCATGCTTTTACCCAAAATTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCACTAGAGGATAAGGAAAACAACCCATGCTTTTACCCAAAATTTG  550

seq1  TCTTGCCTATCAGAAATTCAGAGACAAAGCTGAAGTATAGACAAATGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCTATCAGAAATTCAGAGACAAAGCTGAAGTATAGACAAATGTCC  600

seq1  AACGGATGATTGTCCCAACTTGAGAAACATCACATGCCCAAGAACTAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGATGATTGTCCCAACTTGAGAAACATCACATGCCCAAGAACTAAAC  650

seq1  CCTTACACTATCAATGATACTCTGCTATGCTTGCAGGCAAGACCCTAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACACTATCAATGATACTCTGCTATGCTTGCAGGCAAGACCCTAGCA  700

seq1  TCACCGTCCTCTGAAAGTGACCACTCACTAACCAATGGAAAGAGATATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCGTCCTCTGAAAGTGACCACTCACTAACCAATGGAAAGAGATATCT  750

seq1  TTTCATTTTGGTCTTTAAGTTGGTTACCTAACAACTGGAGTGGCTGTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTTGGTCTTTAAGTTGGTTACCTAACAACTGGAGTGGCTGTCCC  800

seq1  TAACTCTGTTGCCTGCCTGGGGATCCCATTTCCCTAACCAAACTGCGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTGTTGCCTGCCTGGGGATCCCATTTCCCTAACCAAACTGCGTTG  850

seq1  TCTGGCCTCAGTGGGGGAGAATATGCCTGGTCC  883
      |||||||||||||||||||||||||||||||||
seq2  TCTGGCCTCAGTGGGGGAGAATATGCCTGGTCC  883