BAC Information

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BAC

Clone NameB6Ng01-136E07
Chromosome11 (Build37)
Map Location 95,399,098 - 95,399,135
singlet/doubletsinglet
Overlap genenone
Upstream geneRsad1, BC018371, Chad, Lrrc59, Eme1, Mrpl27, Xylt2, OTTMUSG00000002038, Cdc34-ps, A430060F13Rik, Tmem92, LOC100039410, LOC544807, LOC544808, LOC665174, LOC432591, LOC100039739, Col1a1, Sgca, Hils1, Ppp1r9b, Samd14, Pdk2, Itga3, Dlx3, Dlx4, LOC100039437, Tac4, Myst2, 5730593F17Rik, Slc35b1, Spop, LOC100039483, Nxph3
Downstream geneNgfr, Phb, 1110035M17Rik, Zfp652, EG665273, Phospho1, Abi3, Gngt2, LOC100040014, B4galnt2, Igf2bp1, LOC100040040, Gip, Snf8, Ube2z, Atp5g1, Ndp52, Ttll6, Hoxb13, LOC432593, LOC100039639, Gm53, Hoxb9, Hoxb8, Hoxb7, Hoxb6, Hoxb5, Hoxb4, Hoxb3, Hoxb2, Hoxb1, LOC100040242, OTTMUSG00000001775, Skap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136E07.bB6Ng01-136E07.g
ACCDH936086DH936087
length3281,212
definitionDH936086|Mus musculus domesticus DNA, BAC clone: B6Ng01-136E07, 5' end.DH936087|Mus musculus domesticus DNA, BAC clone: B6Ng01-136E07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
caagcccaggatctgctcaaggactacctagaatattggtgaaggacagg
gaacaaagttggatattgcttaggtatttgccaagtcattacttggaggc
acttataataaaacaacattgaaagaagtcacaaagattcaatcacttac
taatgtaaggacaagtttgatgcattttttccaggatggtatgttcctga
agacttagtttccatgaactttttgactagggactgtgtctaaatattta
ggactgtcatgggagtcactactggggtttgtgttccaatggctggtgtg
cgtttgtgtgtgtgtgtgtgggtgtgtg
gaattcaacttttctggggacataaatcttcctcaggacaagcacacacc
ctcatcgcactgaggccagacaatgcaatcctctgctacatatgtatagt
aggggttatgtactagtacttgtatgctttttggttggtggcttagtacc
tgagaattctgggaaatctggttttttcatggtgttgttcttccaatagg
gttgtaattcccttcagttccttcagtctttgatcaaactcttccatagg
ggttcctgggtttagaccaatggttggctgtaaatatctgcatctgtctc
agtcagttgatggcatagcctcttttaggatagtcatgccatgttcatgt
ctgaaagcatatctttgtcaattaacaaatgggaccttctgaaactgaaa
agcttctgtaaggcaaaggacactgtcaataggacaaaatggcaacctag
taatggagaaaagttctttactaaccctacatctgatcgagggctaatat
tcaaaatatacaaagaattcaagaagctagactccaaaaaaaaaaacaaa
acaaaacaaaacaaaacaaaaaacaaaaaacaacctaatgaaaaaatgag
ctctagagctaaacaaaattctcaatttaggaatctgaaaagcctgagaa
gcacctaaagaaatgttcaacatcctcatttattgtgaaataaaaatcaa
aaccacgctgattccatcctaaaccaatcagaatggttgagaccaaaatg
tcaggtgaaaatagctgctagagcaaatgtagataaaaaagaacacttta
tctttgctagtgggattgcaaagtgttttccagattccataatctggaaa
tattctggcattttcttcacaaattggaaataagtctatctgaatattca
tatatacaacttctgggcatatacccaaaatgctctaccatatcatgagt
aaaccttcagtgtttacagcagccttattatatatcgggggtcaggacta
tgccgactaagaaattatctgaacaggtagaagagtgcacccacagaact
gacatcttctggacgaggcccgaccgcttgagcgacgccttagcatgagc
agccccctcccacagacggatctgctgtagaaggctcagcctaggacagg
agtccacctgatctggagcccactcgcaactttaaactaattcgtcacac
aagtagaaacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_95399098_95399135
seq2: B6Ng01-136E07.b_344_380 (reverse)

seq1  CACACACACACACACACACACACAAACACACACACAGC  38
      ||||||| ||||||||||||||||||| ||||| ||||
seq2  CACACACCCACACACACACACACAAACGCACAC-CAGC  37