BAC Information

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BAC

Clone NameB6Ng01-136H24
Chromosome11 (Build37)
Map Location 37,784,742 - 37,929,419
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039148
Downstream geneLOC276941
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136H24.bB6Ng01-136H24.g
ACCDH936256DH936257
length1,1501,032
definitionDH936256|Mus musculus domesticus DNA, BAC clone: B6Ng01-136H24, 5' end.DH936257|Mus musculus domesticus DNA, BAC clone: B6Ng01-136H24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,928,282 - 37,929,419)(37,784,742 - 37,785,774)
sequence
gaattcttctaagctacttccctggctagagttcagaatattcaccttgg
ctggtgaccatactttggggtatcctgttttgagtccccagaacaaattg
acttcatccttaaaaagcagccgaagtgtctgcctgtaagatgagaaggt
gctggtcttttccagtcttcctgccttttctctctccttcctatctgagg
atttgttcacctaggttcccatgtattgcataacttgaccattgatttac
ctgcctgtgcctctaggactttgccatacttctgtctgttaagcagaata
tctgagaattgggaaggagtgcctttgtgcgtctctgtgtctgagagtgt
ggagccctgcagaatactccagtgcagccgagagacagtttttatcttca
tgttaaactgcttgcattttaggaagaaaggaacacttctttacttcttc
caatatattcttcaaaattataagatggccagtgttgtttcaaagtaaat
aaaattatttagtatttatacaggattcatggaaacgtatgacagatttt
ctggagacttggggctttttaataacgtgtttattggtgctgtgtttgtt
tgtattcttgtccatggatctttggtttaagatagatatgtagattttct
ggcaaggagatatttatttctacatttccacttcatttgttacgttaagt
ctaactgactttctgtctctgttctgtctcgttctgtcagtttctgtttc
tctctgtctgtttctgtttctctctgtctctgcccctgtctctctgtctg
tttctgtctttctctctctttgtttctgtgtctctgtctctgcccctgac
tctctgtctgtttctgtctttctctctctttgtttctgtgtctctgtcat
ctctctctgtctctctctctgtctctctctgtgtctgtttctgtgtattc
ccatggtgcacaatatttcttgcagctacatgatgataagaaaatcagcc
tgccaaattacacttctctcttctcttaaactgacctcttagccagtttc
tttagtaagatatagaatgattttttatcccttccaggggtgggagagta
aaagtccaagagacaaacacattatttttcatttgatatttggtttaatg

gaattccttgcagaaacagtgtgcttcagatttagtattagaagggacac
acatgggctgaagctgagttagacttttgaaattgcctgtattcttgtct
tgattgtcctgtgttatataatacataatttagatgaacaatttacccaa
atagtgtgcactcaacaggtttcccatctcaattcagggtgggataaact
gcagatgggtaggacctaaaggtagctggcaaagagactcgatcatgtaa
ctattgaagtttcccagcagtaagtaaccaataagggacaatgtgccaag
tgcaatgtatcacggatgaggcatacagcaaacatatacacaaagaactg
gggaacgtgtttctggacactgaggactgaaaaggccctagggagtcact
tacttaagtatataagccctgactttagaatccacacaaaaacagcaatg
agaaagaagatatgtgatcatgagaaaaacaaacccttagccattgcttt
aaaactcttagtagaatcaggcagccctgaggatttggtaacaagctcaa
gctcatgaagttttgcagttgactccttataggttcccagaaacaggtct
ctgaaccttcagaaaccgaactcagacatgctactcacaaacatcacaga
acactgttcgagcagaaatttctcaagaggaggaaaaggaatggcgcttt
actgaatacttatttcggtgccaacaactgtgacaactggcgacaatact
gaaatttgggtattattattctcattttgcacagctgggaagctaatatt
ctttttggtaatttgccttaaatctcagagcttaacagtagataaactga
atccatcttgtttcattaaaaaacatgggcacatttctggcattctgtgt
tcattcctggagtgatacaacaggctgtcgcccccccccccgtccctatt
ccccttcccttctctcctctctcctcctctctctttgccccatctctctc
tctctctccctctctctctctctctcttctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_37928282_37929419
seq2: B6Ng01-136H24.b_37_1186 (reverse)

seq1  CATTAA--CAAATATCAAATG-AAAATAATGTGTTTGTTCTTTGTACTTT  47
      ||||||  ||||||||||||| ||||||||||||||||   ||| |||||
seq2  CATTAAACCAAATATCAAATGAAAAATAATGTGTTTGTCTCTTGGACTTT  50

seq1  TTATCTCC--ACCCTGGAAGG---TAAAAATCA-TCTATATCTTACTAAA  91
      |  |||||   ||||||||||    |||||||| ||||||||||||||||
seq2  TACTCTCCCACCCCTGGAAGGGATAAAAAATCATTCTATATCTTACTAAA  100

seq1  GAAACTGGCTAAGA-GTCAGTTTTAAGAG-AGAGAG-AGTGTAATTTTGG  138
      |||||||||||||| ||||| |||||||| |||||| ||||||| |||||
seq2  GAAACTGGCTAAGAGGTCAG-TTTAAGAGAAGAGAGAAGTGTAA-TTTGG  148

seq1  CAGGCTGATTTTCTTATCATCATGTAGCTGCAAG-AATATTGTGCA-CAT  186
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  CAGGCTGATTTTCTTATCATCATGTAGCTGCAAGAAATATTGTGCACCAT  198

seq1  GTGAATACACAGAAACAGACACAGAGAGAGACAGAGAGAGAGACAGAGAG  236
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATACACAGAAACAGACACAGAGAGAGACAGAGAGAGAGACAGAGAG  248

seq1  AGATGACAGAGACACAGAAACAAAGAGAGAGAAAGACAGAAACAGACAGA  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACAGAGACACAGAAACAAAGAGAGAGAAAGACAGAAACAGACAGA  298

seq1  GAGTCAGGGGCAGAGACAGAGACACAGAAACAAAGAGAGAGAAAGACAGA  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGGGGCAGAGACAGAGACACAGAAACAAAGAGAGAGAAAGACAGA  348

seq1  AACAGACAGAGAGACAGGGGCAGAGACAGAGAGAAACAGAAACAGACAGA  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACAGAGAGACAGGGGCAGAGACAGAGAGAAACAGAAACAGACAGA  398

seq1  GAGAAACAGAAACTGACAGAACGAGACAGAACAGAGACAGAAAGTCAGTT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACAGAAACTGACAGAACGAGACAGAACAGAGACAGAAAGTCAGTT  448

seq1  AGACTTAACGTAACAAATGAAGTGGAAATGTAGAAATAAATATCTCCTTG  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTAACGTAACAAATGAAGTGGAAATGTAGAAATAAATATCTCCTTG  498

seq1  CCAGAAAATCTACATATCTATCTTAAACCAAAGATCCATGGACAAGAATA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAATCTACATATCTATCTTAAACCAAAGATCCATGGACAAGAATA  548

seq1  CAAACAAACACAGCACCAATAAACACGTTATTAAAAAGCCCCAAGTCTCC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACACAGCACCAATAAACACGTTATTAAAAAGCCCCAAGTCTCC  598

seq1  AGAAAATCTGTCATACGTTTCCATGAATCCTGTATAAATACTAAATAATT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATCTGTCATACGTTTCCATGAATCCTGTATAAATACTAAATAATT  648

seq1  TTATTTACTTTGAAACAACACTGGCCATCTTATAATTTTGAAGAATATAT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACTTTGAAACAACACTGGCCATCTTATAATTTTGAAGAATATAT  698

seq1  TGGAAGAAGTAAAGAAGTGTTCCTTTCTTCCTAAAATGCAAGCAGTTTAA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAAGTAAAGAAGTGTTCCTTTCTTCCTAAAATGCAAGCAGTTTAA  748

seq1  CATGAAGATAAAAACTGTCTCTCGGCTGCACTGGAGTATTCTGCAGGGCT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGATAAAAACTGTCTCTCGGCTGCACTGGAGTATTCTGCAGGGCT  798

seq1  CCACACTCTCAGACACAGAGACGCACAAAGGCACTCCTTCCCAATTCTCA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTCTCAGACACAGAGACGCACAAAGGCACTCCTTCCCAATTCTCA  848

seq1  GATATTCTGCTTAACAGACAGAAGTATGGCAAAGTCCTAGAGGCACAGGC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCTGCTTAACAGACAGAAGTATGGCAAAGTCCTAGAGGCACAGGC  898

seq1  AGGTAAATCAATGGTCAAGTTATGCAATACATGGGAACCTAGGTGAACAA  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAATCAATGGTCAAGTTATGCAATACATGGGAACCTAGGTGAACAA  948

seq1  ATCCTCAGATAGGAAGGAGAGAGAAAAGGCAGGAAGACTGGAAAAGACCA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCAGATAGGAAGGAGAGAGAAAAGGCAGGAAGACTGGAAAAGACCA  998

seq1  GCACCTTCTCATCTTACAGGCAGACACTTCGGCTGCTTTTTAAGGATGAA  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTTCTCATCTTACAGGCAGACACTTCGGCTGCTTTTTAAGGATGAA  1048

seq1  GTCAATTTGTTCTGGGGACTCAAAACAGGATACCCCAAAGTATGGTCACC  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTTGTTCTGGGGACTCAAAACAGGATACCCCAAAGTATGGTCACC  1098

seq1  AGCCAAGGTGAATATTCTGAACTCTAGCCAGGGAAGTAGCTTAGAAGAAT  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGGTGAATATTCTGAACTCTAGCCAGGGAAGTAGCTTAGAAGAAT  1148

seq1  TC  1138
      ||
seq2  TC  1150

seq1: chr11_37784742_37785774
seq2: B6Ng01-136H24.g_67_1098

seq1  GAATTCCTTGCAGAAACAGTGTGCTTCAGATTTAGTATTAGAAGGGACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCAGAAACAGTGTGCTTCAGATTTAGTATTAGAAGGGACAC  50

seq1  ACATGGGCTGAAGCTGAGTTAGACTTTTGAAATTGCCTGTATTCTTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGCTGAAGCTGAGTTAGACTTTTGAAATTGCCTGTATTCTTGTCT  100

seq1  TGATTGTCCTGTGTTATATAATACATAATTTAGATGAACAATTTACCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTCCTGTGTTATATAATACATAATTTAGATGAACAATTTACCCAA  150

seq1  ATAGTGTGCACTCAACAGGTTTCCCATCTCAATTCAGGGTGGGATAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTGCACTCAACAGGTTTCCCATCTCAATTCAGGGTGGGATAAACT  200

seq1  GCAGATGGGTAGGACCTAAAGGTAGCTGGCAAAGAGACTCGATCATGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGGGTAGGACCTAAAGGTAGCTGGCAAAGAGACTCGATCATGTAA  250

seq1  CTATTGAAGTTTCCCAGCAGTAAGTAACCAATAAGGGACAATGTGCCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGAAGTTTCCCAGCAGTAAGTAACCAATAAGGGACAATGTGCCAAG  300

seq1  TGCAATGTATCACGGATGAGGCATACAGCAAACATATACACAAAGAACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATGTATCACGGATGAGGCATACAGCAAACATATACACAAAGAACTG  350

seq1  GGGAACGTGTTTCTGGACACTGAGGACTGAAAAGGCCCTAGGGAGTCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACGTGTTTCTGGACACTGAGGACTGAAAAGGCCCTAGGGAGTCACT  400

seq1  TACTTAAGTATATAAGCCCTGACTTTAGAATCCACACAAAAACAGCAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAAGTATATAAGCCCTGACTTTAGAATCCACACAAAAACAGCAATG  450

seq1  AGAAAGAAGATATGTGATCATGAGAAAAACAAACCCTTAGCCATTGCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAGATATGTGATCATGAGAAAAACAAACCCTTAGCCATTGCTTT  500

seq1  AAAACTCTTAGTAGAATCAGGCAGCCCTGAGGATTTGGTAACAAGCTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTTAGTAGAATCAGGCAGCCCTGAGGATTTGGTAACAAGCTCAA  550

seq1  GCTCATGAAGTTTTGCAGTTGACTCCTTATAGGTTCCCAGAAACAGGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGAAGTTTTGCAGTTGACTCCTTATAGGTTCCCAGAAACAGGTCT  600

seq1  CTGAACCTTCAGAAACCGAACTCAGACATGCTACTCACAAACATCACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACCTTCAGAAACCGAACTCAGACATGCTACTCACAAACATCACAGA  650

seq1  ACACTGTTCGAGCAGAAATTTCTCAAGAGGAGGAAAAGGAATGGCGCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTTCGAGCAGAAATTTCTCAAGAGGAGGAAAAGGAATGGCGCTTT  700

seq1  ACTGAATACTTATTTCGGTGCCAACAACTGTGACAACTGGCGACAATACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATACTTATTTCGGTGCCAACAACTGTGACAACTGGCGACAATACT  750

seq1  GAAATTTGGGTATTATTATTCTCATTTTGCACAGCTGGGAAGCTAATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTGGGTATTATTATTCTCATTTTGCACAGCTGGGAAGCTAATATT  800

seq1  CTTTTTGGTAATTTGCCTTAAATCTCAGAGCTTAACAGTAGATAAACTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGGTAATTTGCCTTAAATCTCAGAGCTTAACAGTAGATAAACTGA  850

seq1  ATCCATCTTGTTTCATTACAAAACATGGGCACATTTCTGGCATTCTGTGT  900
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATCCATCTTGTTTCATTAAAAAACATGGGCACATTTCTGGCATTCTGTGT  900

seq1  TCATTCCTGGAGTGATACAACAGGCTGTCGCCCCCCCCCCCGTCCCTATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCTGGAGTGATACAACAGGCTGTCGCCCCCCCCCCCGTCCCTATT  950

seq1  CCCCTTCCCTTCTCTCCTCTCTCCTCCTCTCTCTTTGCCCCATCTCTCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCCCTTCTCTCCTCTCTCCTCCTCTCTCTTTGCCCCATCTCTCTC  1000

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  1033
      |||||||| |||||||||||||||||| |||||
seq2  TCTCTCTCCCTCTCTCTCTCTCTCTCT-TCTCT  1032