BAC Information

Click to search

BAC

Clone NameB6Ng01-137A07
Chromosome11 (Build37)
Map Location 55,152,049 - 55,284,617
singlet/doubletdoublet
Overlap geneSparc, Atox1, G3bp
Upstream geneAcsl6, 4930404A10Rik, LOC100041400, LOC100041411, Fnip1, Rapgef6, Cdc42se2, LOC677786, LOC100041463, Lyrm7, Hint1, Gpx3, Tnip1, LOC667826, Anxa6, Ccdc69, Gm2a, LOC667832, Slc36a3, Slc36a2, Slc36a1, Fat2
Downstream geneGlra1, Nmur2, LOC100040816, LOC624168
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137A07.bB6Ng01-137A07.g
ACCDH936641DH936642
length1,0151,024
definitionDH936641|Mus musculus domesticus DNA, BAC clone: B6Ng01-137A07, 5' end.DH936642|Mus musculus domesticus DNA, BAC clone: B6Ng01-137A07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,152,049 - 55,153,065)(55,283,587 - 55,284,617)
sequence
gaattctgggctagaacgttacaatcccttactcagccatcatgttgttt
tctagaaaataaatgaaactggagatcaccattgttctggtttactttct
tttgctatgatgaaacactcacaagaaacaagatgggggaggaaagggtt
tatttcagcttacccttgcggtcacagttcatcctgagagaagccagggg
aggaactgaagcagaaaccacagaggaatgctacctttttactcactcat
agacccacgctcagccagatttcttttatagcccaggccaacctgcctag
ggatgatgccgcccacagtgggctgggccctattacatcaattaataatc
aagacaatgccccacagacatgccaacaggacaacctgatgtaggcaatg
cttcacttgagattccctctttctgggtgactctaggctgtgtcaggttg
acaataaaaaccaatcaggtcaaccgcattagacaatgaaaagcagatcc
agaaaagcaactgtcacgtggtttctctctcaggcacagaatggtgagga
gagagggaggaggaggaccagtggcaacaagagagcaatggagccccagc
aaatcctgcatgcttcctcttggatgcaggatgtgcacatgcagaagtat
gtgagtctgatatggaggcaggagagaactgtttgtgggagaggggagag
accatggcagttgggtgcttaagagcaaagtaccaagatcttcctctgtg
aaaatgccataatgaaaccccattgtttggggcctgggccagggtgcagt
ggccaaaacacttgctgtggaaatgtcaggaccagagtttcagatcccag
gactaatgtacttatcaagcatgtgtggcaactcaccagtaaatccagac
tccagaagtggagacaagatctccagagcaagttatctctttgagactga
ccttgtgggcaagtttcgggtgtgactgagagactgcttcatgataggag
gaagcctaatgaata
gaattccaggccaggaagggctccacagtaagaatttttaaaaaaggcag
ttgatcatcgatggttcggcaggagacctaatggctgtgcttgccaacaa
acccaatcggtgactgtgacccactgcacaataactggacactggacacc
atcctctccccagcaatttcagatgtgacttatttttgtggctctggtga
ctgaacccggggcttcctgtattccatgccaagtgctccacctctgcact
gaagcccgggccggtcctatccaatttcaaactttaacttcaactcttgt
aagaatttaaacactttgtttccttggacttacgaccttctcaaacaaag
gtttttttaatctaagtttgttctgattcacaactaaaacattctaagtt
aaaaaggggtcttgaagagtcaagatctaatgtcagagtttgacttcctg
ttggcgggaatttcccgttacctcgaggtgcgtttcggacctgctgagag
gcacactcgattacattacactcactgtatttttctctatttttcccaga
agctaacttggaggcgcatctatctatctatgtaagtgcgaagaaagcta
agtcttcctttgtcattcaaaaccccactcctaatctcttctctggagtc
ccccactggctcgcagatgccaccacgggacttcttatactggggtttgc
acctcagattcaagagctcagtggccgatggtgtcccacagccacgtagc
ctgcacagatgcctgtcctttccctacagagggccttgattccacctcgt
tctcctgttgactggacctacctgattgcacccaggtgaccgggaagggc
gggaaaaagggaactctcggcatagtgcagggggaaacagtggggggatt
ggagagatcacgtcttggcgtgctgtctctgcacccactgagcccttgac
ccggggtcgcgcgcctcgttctgcactctgggaggcgcgatcacgctctc
agcttggctcccccaccccatccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_55152049_55153065
seq2: B6Ng01-137A07.b_47_1061

seq1  GAATTCTGGGCTAGAACGTTACAATCCCTTACTCAGCCATCATGTTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGCTAGAACGTTACAATCCCTTACTCAGCCATCATGTTGTTT  50

seq1  TCTAGAAAATAAATGAAACTGGAGATCACCATTGTTCTGGTTTACTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAAATAAATGAAACTGGAGATCACCATTGTTCTGGTTTACTTTCT  100

seq1  TTTGCTATGATGAAACACTCACAAGAAACAAGATGGGGGAGGAAAGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTATGATGAAACACTCACAAGAAACAAGATGGGGGAGGAAAGGGTT  150

seq1  TATTTCAGCTTACCCTTGCGGTCACAGTTCATCCTGAGAGAAGCCAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAGCTTACCCTTGCGGTCACAGTTCATCCTGAGAGAAGCCAGGGG  200

seq1  AGGAACTGAAGCAGAAACCACAGAGGAATGCTACCTTTTTACTCACTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTGAAGCAGAAACCACAGAGGAATGCTACCTTTTTACTCACTCAT  250

seq1  AGACCCACGCTCAGCCAGATTTCTTTTATAGCCCAGGCCAACCTGCCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCACGCTCAGCCAGATTTCTTTTATAGCCCAGGCCAACCTGCCTAG  300

seq1  GGATGATGCCGCCCACAGTGGGCTGGGCCCTATTACATCAATTAATAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGATGCCGCCCACAGTGGGCTGGGCCCTATTACATCAATTAATAATC  350

seq1  AAGACAATGCCCCACAGACATGCCAACAGGACAACCTGATGTAGGCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAATGCCCCACAGACATGCCAACAGGACAACCTGATGTAGGCAATG  400

seq1  CTTCACTTGAGATTCCCTCTTTCTGGGTGACTCTAGGCTGTGTCAGGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTTGAGATTCCCTCTTTCTGGGTGACTCTAGGCTGTGTCAGGTTG  450

seq1  ACAATAAAAACCAATCAGGTCAACCGCATTAGACAATGAAAAGCAGATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAAAACCAATCAGGTCAACCGCATTAGACAATGAAAAGCAGATCC  500

seq1  AGAAAAGCAACTGTCACGTGGTTTCTCTCTCAGGCACAGAATGGTGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGCAACTGTCACGTGGTTTCTCTCTCAGGCACAGAATGGTGAGGA  550

seq1  GAGAGGGAGGAGGAGGACCAGTGGCAACAAGAGAGCAATGGAGCCCCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGAGGAGGAGGACCAGTGGCAACAAGAGAGCAATGGAGCCCCAGC  600

seq1  AAATCCTGCATGCTTCCTCTTGGATGCAGGATGTGCACATGCAGAAGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTGCATGCTTCCTCTTGGATGCAGGATGTGCACATGCAGAAGTAT  650

seq1  GTGAGTCTGATATGGAGGCAGGAGAGAACTGTTTGTGGGAGAGGGGAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCTGATATGGAGGCAGGAGAGAACTGTTTGTGGGAGAGGGGAGAG  700

seq1  ACCATGGCAGTTGGGTGCTTAAGAGCAAAGTACAAAGATCTTCCTCTGTG  750
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACCATGGCAGTTGGGTGCTTAAGAGCAAAGTACCAAGATCTTCCTCTGTG  750

seq1  AAAATGCCATAATGAAACCCCATTGTTTGGGGCCTGGGCCAAGGGTGCAG  800
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAAATGCCATAATGAAACCCCATTGTTTGGGGCCTGGGCC-AGGGTGCAG  799

seq1  TGGCCAAAACACTTGCTGTGGAAATGTCAGGACCAGAG-TTCAGATCCCA  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGGCCAAAACACTTGCTGTGGAAATGTCAGGACCAGAGTTTCAGATCCCA  849

seq1  GGACTAATGTACTTATCAGGCATGTGTGGCAACTCACCAGTAAATCCAGA  899
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGACTAATGTACTTATCAAGCATGTGTGGCAACTCACCAGTAAATCCAGA  899

seq1  CTCCAGAAGTGGAGACAAGATCCCCAGAGCAAGTTAGCTC-TTGAGACTG  948
      |||||||||||||||||||||| ||||||||||||| ||| |||||||||
seq2  CTCCAGAAGTGGAGACAAGATCTCCAGAGCAAGTTATCTCTTTGAGACTG  949

seq1  ACCTTGTTGGCAAGTTCTGGGTGTGACTGAGAGACCTGCTTCAATGATAA  998
      ||||||| ||||||||  |||||||||||||||| ||||||| ||||| |
seq2  ACCTTGTGGGCAAGTTTCGGGTGTGACTGAGAGA-CTGCTTC-ATGAT-A  996

seq1  GGAGGAAAGCTGATGAATA  1017
      |||||||  || |||||||
seq2  GGAGGAAGCCTAATGAATA  1015

seq1: chr11_55283587_55284617
seq2: B6Ng01-137A07.g_69_1092 (reverse)

seq1  GGGATGGGGGTTGGGGGAGCCCAAGCTGAGAGCGTGATCGCGCCTCCCAG  50
      |||||||||  |||||||| ||||||||||||||||||||||||||||||
seq2  GGGATGGGG--TGGGGGAG-CCAAGCTGAGAGCGTGATCGCGCCTCCCAG  47

seq1  GGTTGCAGAACGGAGGCGCGCGACCCCGGGTTCAAGGGCTCAGT-GGTGC  99
       | |||||||| |||||||||||||||||| ||||||||||||| |||||
seq2  AG-TGCAGAAC-GAGGCGCGCGACCCCGGG-TCAAGGGCTCAGTGGGTGC  94

seq1  AGAGACAGCCACGCCAAGACGTGATCTCTCCAATCCCCCCACTGTTTCCC  149
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAG-CACGCCAAGACGTGATCTCTCCAATCCCCCCACTGTTTCCC  143

seq1  CCTGCACTATGCCGAGAGTTCCCTTTTTTCCCGCCCTTCCCGGTCACCTG  199
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCTGCACTATGCCGAGAGTTCCC-TTTTTCCCGCCCTTCCCGGTCACCTG  192

seq1  GGTGCAATCAGGTAGGTCCAGTCAACAGGAGAACGAGGTGGAATCAAGGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAATCAGGTAGGTCCAGTCAACAGGAGAACGAGGTGGAATCAAGGC  242

seq1  CCTCTGTAGGGAAAGGACAGGCATCTGTGCAGGCTACGTGGCTGTGGGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTAGGGAAAGGACAGGCATCTGTGCAGGCTACGTGGCTGTGGGAC  292

seq1  ACCATCGGCCACTGAGCTCTTGAATCTGAGGTGCAAACCCCAGTATAAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCGGCCACTGAGCTCTTGAATCTGAGGTGCAAACCCCAGTATAAGA  342

seq1  AGTCCCGTGGTGGCATCTGCGAGCCAGTGGGGGACTCCAGAGAAGAGATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCGTGGTGGCATCTGCGAGCCAGTGGGGGACTCCAGAGAAGAGATT  392

seq1  AGGAGTGGGGTTTTGAATGACAAAGGAAGACTTAGCTTTCTTCGCACTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGGGGTTTTGAATGACAAAGGAAGACTTAGCTTTCTTCGCACTTA  442

seq1  CATAGATAGATAGATGCGCCTCCAAGTTAGCTTCTGGGAAAAATAGAGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATAGATAGATGCGCCTCCAAGTTAGCTTCTGGGAAAAATAGAGAA  492

seq1  AAATACAGTGAGTGTAATGTAATCGAGTGTGCCTCTCAGCAGGTCCGAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAGTGAGTGTAATGTAATCGAGTGTGCCTCTCAGCAGGTCCGAAA  542

seq1  CGCACCTCGAGGTAACGGGAAATTCCCGCCAACAGGAAGTCAAACTCTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACCTCGAGGTAACGGGAAATTCCCGCCAACAGGAAGTCAAACTCTGA  592

seq1  CATTAGATCTTGACTCTTCAAGACCCCTTTTTAACTTAGAATGTTTTAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGATCTTGACTCTTCAAGACCCCTTTTTAACTTAGAATGTTTTAGT  642

seq1  TGTGAATCAGAACAAACTTAGATTAAAAAAACCTTTGTTTGAGAAGGTCG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATCAGAACAAACTTAGATTAAAAAAACCTTTGTTTGAGAAGGTCG  692

seq1  TAAGTCCAAGGAAACAAAGTGTTTAAATTCTTACAAGAGTTGAAGTTAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCCAAGGAAACAAAGTGTTTAAATTCTTACAAGAGTTGAAGTTAAA  742

seq1  GTTTGAAATTGGATAGGACCGGCCCGGGCTTCAGTGCAGAGGTGGAGCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAATTGGATAGGACCGGCCCGGGCTTCAGTGCAGAGGTGGAGCAC  792

seq1  TTGGCATGGAATACAGGAAGCCCCGGGTTCAGTCACCAGAGCCACAAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATGGAATACAGGAAGCCCCGGGTTCAGTCACCAGAGCCACAAAAA  842

seq1  TAAGTCACATCTGAAATTGCTGGGGAGAGGATGGTGTCCAGTGTCCAGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCACATCTGAAATTGCTGGGGAGAGGATGGTGTCCAGTGTCCAGTT  892

seq1  ATTGTGCAGTGGGTCACAGTCACCGATTGGGTTTGTTGGCAAGCACAGCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGCAGTGGGTCACAGTCACCGATTGGGTTTGTTGGCAAGCACAGCC  942

seq1  ATTAGGTCTCCTGCCGAACCATCGATGATCAACTGCCTTTTTTAAAAATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTCTCCTGCCGAACCATCGATGATCAACTGCCTTTTTTAAAAATT  992

seq1  CTTACTGTGGAGCCCTTCCTGGCCTGGAATTC  1031
      ||||||||||||||||||||||||||||||||
seq2  CTTACTGTGGAGCCCTTCCTGGCCTGGAATTC  1024