BAC Information

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BAC

Clone NameB6Ng01-137F21
Chromosome11 (Build37)
Map Location 105,668,259 - 105,669,420
singlet/doubletsinglet
Overlap geneTanc2
Upstream geneLOC666749, LOC632784, LOC276809, LOC100041125, 4921510J17Rik, Mettl2, LOC666771, Tlk2, 1700052K11Rik, Mrc2, Rnf190, EG666807, LOC667737
Downstream geneCyb561, Ace, EG217246, Kcnh6, Wdr68, Ccdc44, Map3k3, Limd2, 2610019A05Rik, 2610204L23Rik, Ddx42, Ftsj3, Psmc5, Smarcd2, Tcam1, Gh, Cd79b, Scn4a, 2310007L24Rik, Icam2, Ern1, LOC100041277, Tex2, Pecam1, Gm885, Polg2, Ddx5, Ccdc45
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137F21.bB6Ng01-137F21.g
ACCDH936903DH936904
length1,1811,152
definitionDH936903|Mus musculus domesticus DNA, BAC clone: B6Ng01-137F21, 5' end.DH936904|Mus musculus domesticus DNA, BAC clone: B6Ng01-137F21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtggctccatctgagcctacatttctttttcaatcagaagact
ttttattactgtttccattgccttctttgttattgttctgtttaggttac
tagcctcctcttggttgtttaaattcatccatttcttttaggtttttcat
cttaatgggacataggttttcaaagtattctctaataatactctgtattt
ctttggtgtctgttgtaatgctccaatgtttgttttggactttggtatta
tgtgtcatctctttcttttttgtggttatttgggccaatgatctgtcaat
ctttcaaagaaaaaaacttagattcattgtttgtttgttgttttttttgt
ttttacttcattaatttctgccttgattttgttatttcttgcaatctact
tgtattggatttgattttttttttcaatttttaaagttatatcattaaat
catttatttgttctctgattcttttttgcacttaaggctgtaaattttcc
tcttagagatgcttttaacatgttctagtaatttagttgtgttatgttta
aattttcatttagttccaggaatattttgatttcttctttgatccattca
tcattcagtaagtaatgagttaatagtcacatgtttgcacacttactaga
gttttgtttgcttttaattttaagttttattgcataatggtcagatagta
tacagaggattatttcagtgtttctgtatttgttaaggtttgcttcatat
accaacatgtggtctattttagaagagcttccatgtgcttctgaatagga
tatgtattctttgacatttaggtacactattctgtagcaacctgttaggt
ccatttgatgtaagatgccatgtaattctgtttagtttttgttttgtttg
tttgttttttgtccagatggtctatgtattataaaagttcatctaggtag
tgctttttttttttaagatttatttattattatacataagtacactgtag
ctgactttcagatgcaccataagaagggcgtcagatctcattacgggtgt
tggaaacactagtgggttgctgggattgaacatggatcctttggaagaca
gatcgtgccatacctgctgacgtctcacgagccctaggtaatgctttagg
gaacttttattgaagttctgtttaaggggaa
gaattctctcagcttagggaaacaagtccatggacacaaagtatagtaga
acacaggtaagctgtttacggtgactgaactttggaagtagtacttacta
atctgctctttaatttattcactcggttaatacaaaagtggcagcaaaaa
tatcaaccctatttcctaataatacttttgccatgctttttcttttcttt
gagataaagtcttactatgcagccttggctagcctgaaattgtagacaac
atgatctcatatataaaaaactttgagtagtgtttttatgcactggtagc
aaatattctaaataaaaaaggaattaaaaaatcaatctcatttgtcatag
tttcaaaaacaacaaatgaaatacctaagaataaattttataactaaaga
agtaaagaagctctacaattaaagctataaaggaactaaaaatgaaagag
actaaaaggaacccaaaattggaacgacatcctgtgctcatacactataa
gacctaatattgctaaaaatgtccatgctattaaaagtaacctatagccc
cattgaacccttttcaaaattcttcacaaaacacattatattacctgact
tcaaaataccctataaaactgcagtaatcaatactacatgctttggaata
cagtattgatgtggacacatcagtcaaaggaacagaataaagactgaatg
aaaaaccgcacactttacaaccaactcattttagcacaagtgccaagaac
ccacagcagggagaggaatcctgcagcaagcggcgctgggaagctggacg
tgcaccagcagagagaatactcatcgctcatcacatgtgggaaacaagtc
aaggttcccaactaggaaatcagttgaaaacaactctgaataccacaaga
atggagaactatttggataaaacttaaaagtacaagggacaaatagattg
tatcaaactcttcctgtcactgggagcttcttcatttccaagtatcttct
gagaaaacctctgtcatagtgtgtaagtctttcgtcttctttgtcaatgg
agcttgaatacactttctctgctcactgactgatctcctagtcagaatca
aggccaggctgcctcccttacttaatgaactgaggatgcttgaactctct
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_105668259_105669420
seq2: B6Ng01-137F21.g_70_1221 (reverse)

seq1  TCAG-GAGTTCAAAGCCATCCTCAG-TCATTAAGTAAAGGGAGGCCAGCC  48
      |||| ||||||||   ||||||||| ||||||||| |||||||| |||||
seq2  TCAGAGAGTTCAA--GCATCCTCAGTTCATTAAGT-AAGGGAGG-CAGCC  46

seq1  TGGGCTCTTGA-TCTGACTAGGAGATCAGTCAGTGAAGCAGAGAAAGTGT  97
      |||   ||||| ||||||||||||||||||||||| ||||||||||||||
seq2  TGG--CCTTGATTCTGACTAGGAGATCAGTCAGTG-AGCAGAGAAAGTGT  93

seq1  AATCAAAGCTCATTTTGACAAAGGAAGACGAAAGACTTACACACTATGAC  147
      | || ||||||   |||||||| |||||||||||||||||||||||||||
seq2  ATTC-AAGCTC-CATTGACAAA-GAAGACGAAAGACTTACACACTATGAC  140

seq1  AAGAGGTTTTCTCAGAAGATTACTTGGAAATGGAGAAGCTCCCAGTGACA  197
       |||||||||||||||||| |||||||||||| |||||||||||||||||
seq2  -AGAGGTTTTCTCAGAAGA-TACTTGGAAATGAAGAAGCTCCCAGTGACA  188

seq1  GGAAGAGTTTGATACAATCTATTTGTCCCCTTGTACTTTTAAGTTTTATC  247
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGAAGAGTTTGATACAATCTATTTGT-CCCTTGTACTTTTAAGTTTTATC  237

seq1  CAAATAGTTCTCCATTCTTGTGGTATTCAGGGTTGTTTTCAACTGATTTC  297
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAAATAGTTCTCCATTCTTGTGGTATTCAGAGTTGTTTTCAACTGATTTC  287

seq1  CTAGTTGGGAACCTTGACTTGTTTCCCACATGTGATGAGCGATGAGTATT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTGGGAACCTTGACTTGTTTCCCACATGTGATGAGCGATGAGTATT  337

seq1  CTCTCTGCTGGTGCACGTCCAGCTTCCCAGCGCCGCTTGCTGCAGGATTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGCTGGTGCACGTCCAGCTTCCCAGCGCCGCTTGCTGCAGGATTC  387

seq1  CTCTCCCTGCTGTGGGTTCTTGGCACTTGTGCTAAAATGAGTTGGTTGTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCTGCTGTGGGTTCTTGGCACTTGTGCTAAAATGAGTTGGTTGTA  437

seq1  AAGTGTGCGGTTTTTCATTCAGTCTTTATTCTGTTCCTTTGACTGATGTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGCGGTTTTTCATTCAGTCTTTATTCTGTTCCTTTGACTGATGTG  487

seq1  TCCACATCAATACTGTATTCCAAAGCATGTAGTATTGATTACTGCAGTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCAATACTGTATTCCAAAGCATGTAGTATTGATTACTGCAGTTT  537

seq1  TATAGGGTATTTTGAAGTCAGGTAATATAATGTGTTTTGTGAAGAATTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGTATTTTGAAGTCAGGTAATATAATGTGTTTTGTGAAGAATTTT  587

seq1  GAAAAGGGTTCAATGGGGCTATAGGTTACTTTTAATAGCATGGACATTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGGTTCAATGGGGCTATAGGTTACTTTTAATAGCATGGACATTTT  637

seq1  TAGCAATATTAGGTCTTATAGTGTATGAGCACAGGATGTCGTTCCAATTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATATTAGGTCTTATAGTGTATGAGCACAGGATGTCGTTCCAATTT  687

seq1  TGGGTTCCTTTTAGTCTCTTTCATTTTTAGTTCCTTTATAGCTTTAATTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCCTTTTAGTCTCTTTCATTTTTAGTTCCTTTATAGCTTTAATTG  737

seq1  TAGAGCTTCTTTACTTCTTTAGTTATAAAATTTATTCTTAGGTATTTCAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCTTCTTTACTTCTTTAGTTATAAAATTTATTCTTAGGTATTTCAT  787

seq1  TTGTTGTTTTTGAAACTATGACAAATGAGATTGATTTTTTAATTCCTTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTTTTGAAACTATGACAAATGAGATTGATTTTTTAATTCCTTTT  837

seq1  TTATTTAGAATATTTGCTACCAGTGCATAAAAACACTACTCAAAGTTTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAGAATATTTGCTACCAGTGCATAAAAACACTACTCAAAGTTTTT  887

seq1  TATATATGAGATCATGTTGTCTACAATTTCAGGCTAGCCAAGGCTGCATA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGAGATCATGTTGTCTACAATTTCAGGCTAGCCAAGGCTGCATA  937

seq1  GTAAGACTTTATCTCAAAGAAAAGAAAAAGCATGGCAAAAGTATTATTAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGACTTTATCTCAAAGAAAAGAAAAAGCATGGCAAAAGTATTATTAG  987

seq1  GAAATAGGGTTGATATTTTTGCTGCCACTTTTGTATTAACCGAGTGAATA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGGGTTGATATTTTTGCTGCCACTTTTGTATTAACCGAGTGAATA  1037

seq1  AATTAAAGAGCAGATTAGTAAGTACTACTTCCAAAGTTCAGTCACCGTAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAGAGCAGATTAGTAAGTACTACTTCCAAAGTTCAGTCACCGTAA  1087

seq1  ACAGCTTACCTGTGTTCTACTATACTTTGTGTCCATGGACTTGTTTCCCT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTACCTGTGTTCTACTATACTTTGTGTCCATGGACTTGTTTCCCT  1137

seq1  AAGCTGAGAGAATTC  1162
      |||||||||||||||
seq2  AAGCTGAGAGAATTC  1152