BAC Information

Click to search

BAC

Clone NameB6Ng01-141O22
Chromosome11 (Build37)
Map Location 91,630,750 - 91,809,324
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC638903, EG664976, Kif2b
Downstream geneLOC382545
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141O22.bB6Ng01-141O22.g
ACCDH940260DH940261
length1,1931,052
definitionDH940260|Mus musculus domesticus DNA, BAC clone: B6Ng01-141O22, 5' end.DH940261|Mus musculus domesticus DNA, BAC clone: B6Ng01-141O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,808,124 - 91,809,324)(91,630,750 - 91,631,798)
sequence
gaattcaaaggctgtggtaggagttggagaaaagggaactaactaaaaca
tattgtatgaaaaaagatctatcttaaaccttaaaaatagaaaatttaag
ttcaaataaaacagaaaaattgagccttctggaggacctaaaaatgcaat
aagattaatgacttcatagcatgtttcctccttttacaacctaacccatt
tctccatctccccttttacctgtcatcactgtagagctgaaatgatcccc
actgataaactaagtatcaataactaatttaatttgggcctccttgctag
atgactagagaaggggtccggactgaatagggccattggtgggcttcaca
gttcctgaggatctaaggaagaaggtagcagaatataagaatgagtgttt
actctttgttctcactgtcaggccttttctatgtgcatattttcccggga
ttagaatggttggttttttcaatagagtctccctcgagtctctttcctct
ttaacaccatgttagtgacatgccttagaaagagaagcattgcaaagtct
cagcacagtaagcacatatgacatgtgtgaaaagcaggagaacacatttt
ggaccctgtagaaataaacacattattcatatttaatgttggctgataga
gatattcaaatatattgcttttctactagtcagtatgtgatgtaaattat
gacccgcacccgtgggatttgtgactctagagttcagcactaattcttcc
cttggaaattgtactgaaagaaaaataataagaaacttttgagagagctg
ttaatcatcggttttcctttatatgaattaactctaaaaaatcattcttt
taatggaagcatattttatgagtttcagtatgttcttgtaagaaatatca
tcctttcacagactttgcagttcagattaaacatatatacaacgtaaagt
ttgaaaacatcgactagagagatggctcagtggttccgagctcggctgct
cttacgaatgatctgagtggttcttcccgccaccaatgttttgcagcttt
tgctacagagaatgctactacacctttcttttactcccccaggcatccta
tcacacactgtgccccatctggaaagaaaataaaatatttttttacaagc
cttttgaacacatcaaattaagatagatagtaaactctgattc
gaattcacttgattttcagctaccaaggagcaaagaaagtctcctttgac
aaacctatttgctgctagtctaggtttacaaaaattatatttcaattaat
tagtattacattgtctttgcctggagaaattgatttttatccttaaagca
atagaaacagttgtaacattttattctttatccttttaaaatgattgaaa
caggaggaaattcaatgtgaaggttgggattgtatgttaaagctgacgga
ggacttaaatatagaatgcctattccttggttcagtgctcttgcaggtat
aaaattacatggagatatatattttgtagattttatatttcctttaaaag
tcctcttgctaaatttgaaggcctatgtgttaacaccctacagagaacaa
aatcaatgcaagcaatataaattacagcggctgataatagctttatgtgt
tggtgctctatcatgcttttacttaattttccctttgaggaaaataaatt
atcttgggtgttgaattatttgatcaaggctatgcttgttcttcaggctc
tgtagactctgagtcacataggctgaggctgtggctatataattgtggct
tgcaaataaaaacagaacactaaaaatgtctgaatgaaataaaatatcca
gctggtctaaaaacagtgacctatcaactctcaaaattagtgttttctct
ttttctttcagtgactatgtctcttagccccatttgatgtgaatgagttc
ataatataagcctttctattttgtctttcagtaattttactcttttgaat
catcatctcttatgatatgaaatacagctgcctcctttaattattttcct
tgttaaaactatcaggaaagaatgtgtccataccggagtaaccacctatt
tcttattgtggaaacaagaagagttacacaatggtctaagttgtcttcag
gatatttgggatggcatttccatggcacttgagatcagaagaaaataaac
atatggaaggagggatggattggttccattagctaaccaattatatgaag
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_91808124_91809324
seq2: B6Ng01-141O22.b_46_1238 (reverse)

seq1  GAATCAGAGTTTAACTATACTATCTTTAATATTTTTAGTTGTTCTAAAAG  50
      |||||||||||| ||||| ||||||    || ||| |  ||||| ||| |
seq2  GAATCAGAGTTT-ACTAT-CTATCT----TAATTTGATGTGTTCAAAAGG  44

seq1  CTTGTTAAATAATTATTTTATTTTTATTCATGATGTGTGCAC-GTGTGTG  99
      |||| |||| || |||||||||||  |||  |||| | |||| |||||||
seq2  CTTG-TAAAAAAATATTTTATTTTCTTTCCAGATG-GGGCACAGTGTGTG  92

seq1  GATGGATGCCTGTGGATGTTAAAAGAAGGTGTATGTAGCATCTTCTGTAG  149
         ||||||||| ||  || |||  |||||||| |||||||  |||||||
seq2  ATAGGATGCCTGGGGGAGTAAAAGAAAGGTGTA-GTAGCATTCTCTGTAG  141

seq1  CAAAAGCTGCAAAACATTGGTGCTGGGAAGAA-CACTCAGATCATCTGTA  198
      ||||||||||||||||||||||  |||||||| ||||||||||||  |||
seq2  CAAAAGCTGCAAAACATTGGTGGCGGGAAGAACCACTCAGATCATTCGTA  191

seq1  AGAGCAGCCGAGCTTCGGAACCACTGAGCCATCTCTCTAGTCGATGTTTT  248
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGCCGAGC-TCGGAACCACTGAGCCATCTCTCTAGTCGATGTTTT  240

seq1  CAAACTTTACGTTGTATATATGTTTAATCTGAACTGCAAAGTCTGTGAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTACGTTGTATATATGTTTAATCTGAACTGCAAAGTCTGTGAAA  290

seq1  GGATGATATTTCTTACAAGAACATACTGAAAACTCATAAAATATGCTTCC  348
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GGATGATATTTCTTACAAGAACATACTG-AAACTCATAAAATATGCTTCC  339

seq1  ATTAAAAGAATGA-TTTTTAGAGTTAATTCATATAAAGGAAAACCGATGA  397
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAGAATGATTTTTTAGAGTTAATTCATATAAAGGAAAACCGATGA  389

seq1  TTAACAGCTCTCTCAAAAGTTTCTTATTATTTTTCTTTCAGTACAATTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGCTCTCTCAAAAGTTTCTTATTATTTTTCTTTCAGTACAATTTC  439

seq1  CAAGGGAAGAATTAGTGCTGAACTCTAGAGTCACAAATCCCACGGGTGCG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAAGAATTAGTGCTGAACTCTAGAGTCACAAATCCCACGGGTGCG  489

seq1  GGTCATAATTTACATCACATACTGACTAGTAGAAAAGCAATATATTTGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATAATTTACATCACATACTGACTAGTAGAAAAGCAATATATTTGAA  539

seq1  TATCTCTATCAGCCAACATTAAATATGAATAATGTGTTTATTTCTACAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTATCAGCCAACATTAAATATGAATAATGTGTTTATTTCTACAGG  589

seq1  GTCCAAAATGTGTTCTCCTGCTTTTCACACATGTCATATGTGCTTACTGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAAATGTGTTCTCCTGCTTTTCACACATGTCATATGTGCTTACTGT  639

seq1  GCTGAGACTTTGCAATGCTTCTCTTTCTAAGGCATGTCACTAACATGGTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGACTTTGCAATGCTTCTCTTTCTAAGGCATGTCACTAACATGGTG  689

seq1  TTAAAGAGGAAAGAGACTCGAGGGAGACTCTATTGAAAAAACCAACCATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGGAAAGAGACTCGAGGGAGACTCTATTGAAAAAACCAACCATT  739

seq1  CTAATCCCGGGAAAATATGCACATAGAAAAGGCCTGACAGTGAGAACAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCCCGGGAAAATATGCACATAGAAAAGGCCTGACAGTGAGAACAAA  789

seq1  GAGTAAACACTCATTCTTATATTCTGCTACCTTCTTCCTTAGATCCTCAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAACACTCATTCTTATATTCTGCTACCTTCTTCCTTAGATCCTCAG  839

seq1  GAACTGTGAAGCCCACCAATGGCCCTATTCAGTCCGGACCCCTTCTCTAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTGAAGCCCACCAATGGCCCTATTCAGTCCGGACCCCTTCTCTAG  889

seq1  TCATCTAGCAAGGAGGCCCAAATTAAATTAGTTATTGATACTTAGTTTAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTAGCAAGGAGGCCCAAATTAAATTAGTTATTGATACTTAGTTTAT  939

seq1  CAGTGGGGATCATTTCAGCTCTACAGTGATGACAGGTAAAAGGGGAGATG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGGATCATTTCAGCTCTACAGTGATGACAGGTAAAAGGGGAGATG  989

seq1  GAGAAATGGGTTAGGTTGTAAAAGGAGGAAACATGCTATGAAGTCATTAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATGGGTTAGGTTGTAAAAGGAGGAAACATGCTATGAAGTCATTAA  1039

seq1  TCTTATTGCATTTTTAGGTCCTCCAGAAGGCTCAATTTTTCTGTTTTATT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTGCATTTTTAGGTCCTCCAGAAGGCTCAATTTTTCTGTTTTATT  1089

seq1  TGAACTTAAATTTTCTATTTTTAAGGTTTAAGATAGATCTTTTTTCATAC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTAAATTTTCTATTTTTAAGGTTTAAGATAGATCTTTTTTCATAC  1139

seq1  AATATGTTTTAGTTAGTTCCCTTTTCTCCAACTCCTACCACAGCCTTTGA  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTTTTAGTTAGTTCCCTTTTCTCCAACTCCTACCACAGCCTTTGA  1189

seq1  ATTC  1201
      ||||
seq2  ATTC  1193

seq1: chr11_91630750_91631798
seq2: B6Ng01-141O22.g_70_1121

seq1  GAATTCACTTGATTTTCAGCTACCAAGGAGCAAAGAAAGTCTCCTTTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGATTTTCAGCTACCAAGGAGCAAAGAAAGTCTCCTTTGAC  50

seq1  AAACCTATTTGCTGCTAGTCTAGGTTTACAAAAATTATATTTCAATTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTATTTGCTGCTAGTCTAGGTTTACAAAAATTATATTTCAATTAAT  100

seq1  TAGTATTACATTGTCTTTGCCTGGAGAAATTGATTTTTATCCTTAAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTACATTGTCTTTGCCTGGAGAAATTGATTTTTATCCTTAAAGCA  150

seq1  ATAGAAACAGTTGTAACATTTTATTCTTTATCCTTTTAAAATGATTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAACAGTTGTAACATTTTATTCTTTATCCTTTTAAAATGATTGAAA  200

seq1  CAGGAGGAAATTCAATGTGAAGGTTGGGATTGTATGTTAAAGCTGACGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGAAATTCAATGTGAAGGTTGGGATTGTATGTTAAAGCTGACGGA  250

seq1  GGACTTAAATATAGAATGCCTATTCCTTGGTTCAGTGCTCTTGCAGGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTAAATATAGAATGCCTATTCCTTGGTTCAGTGCTCTTGCAGGTAT  300

seq1  AAAATTACATGGAGATATATATTTTGTAGATTTTATATTTCCTTTAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTACATGGAGATATATATTTTGTAGATTTTATATTTCCTTTAAAAG  350

seq1  TCCTCTTGCTAAATTTGAAGGCCTATGTGTTAACACCCTACAGAGAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTGCTAAATTTGAAGGCCTATGTGTTAACACCCTACAGAGAACAA  400

seq1  AATCAATGCAAGCAATATAAATTACAGCGGCTGATAATAGCTTTATGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATGCAAGCAATATAAATTACAGCGGCTGATAATAGCTTTATGTGT  450

seq1  TGGTGCTCTATCATGCTTTTACTTAATTTTCCCTTTGAGGAAAATAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTCTATCATGCTTTTACTTAATTTTCCCTTTGAGGAAAATAAATT  500

seq1  ATCTTGGGTGTTGAATTATTTGATCAAGGCTATGCTTGTTCTTCAGGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGGTGTTGAATTATTTGATCAAGGCTATGCTTGTTCTTCAGGCTC  550

seq1  TGTAGACTCTGAGTCACATAGGCTGAGGCTGTGGCTATATAATTGTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACTCTGAGTCACATAGGCTGAGGCTGTGGCTATATAATTGTGGCT  600

seq1  TGCAAATAAAAACAGAACACTAAAAATGTCTGAATGAAATAAAATATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATAAAAACAGAACACTAAAAATGTCTGAATGAAATAAAATATCCA  650

seq1  GCTGGTCTAAAAACAGTGACCTATCAAACTCTCAAAATTAGTGTTTTCTC  700
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GCTGGTCTAAAAACAGTGACCTATC-AACTCTCAAAATTAGTGTTTTCTC  699

seq1  -TTTTCTTTCAGTGACTATGTCTCTTAGCCCCATTGAATGTGAATGAGTT  749
       ||||||||||||||||||||||||||||||||||  |||||||||||||
seq2  TTTTTCTTTCAGTGACTATGTCTCTTAGCCCCATTTGATGTGAATGAGTT  749

seq1  CATAATATAAGCC-TTCTATTTTGCCTTTCAGTAATTTTACTCTTTTGAA  798
      ||||||||||||| |||||||||| |||||||||||||||||||||||||
seq2  CATAATATAAGCCTTTCTATTTTGTCTTTCAGTAATTTTACTCTTTTGAA  799

seq1  TCATCATCTCTTATGATATGAAATACAGCTGCCTCCTTTAA-TATTTTCC  847
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCATCATCTCTTATGATATGAAATACAGCTGCCTCCTTTAATTATTTTCC  849

seq1  TTGTTAAAACTATCAGGAAAGAATGTGTCCATACAGGAGTAA-CACATA-  895
      |||||||||||||||||||||||||||||||||| ||||||| ||| || 
seq2  TTGTTAAAACTATCAGGAAAGAATGTGTCCATACCGGAGTAACCACCTAT  899

seq1  TTCTTATTGTGTAAACAAAGAGAGTTACAACAAT-GTCTAAGTTGTCCTC  944
      ||||||||||| ||||||  |||||||| ||||| |||||||||||| ||
seq2  TTCTTATTGTGGAAACAAGAAGAGTTAC-ACAATGGTCTAAGTTGTCTTC  948

seq1  AGGAATATTT-GGATGGCATTTCCATGGCACTTGGAAAACAGAAGAAAAA  993
      ||| |||||| |||||||||||||||||||||| || | |||||||||| 
seq2  AGG-ATATTTGGGATGGCATTTCCATGGCACTT-GAGATCAGAAGAAAA-  995

seq1  TAAAACATA-GGAAAGAGGGATGGAATTGGTTCAATTAGCCAA-CAATTA  1041
        ||||||| |||| ||||||||| |||||||| |||||| || ||||||
seq2  -TAAACATATGGAAGGAGGGATGG-ATTGGTTCCATTAGCTAACCAATTA  1043

seq1  -ATGAAGAG  1049
       ||||||||
seq2  TATGAAGAG  1052