BAC Information

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BAC

Clone NameB6Ng01-143M18
Chromosome11 (Build37)
Map Location 12,253,585 - 12,254,168
singlet/doubletsinglet
Overlap geneCobl
Upstream geneZpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc, Grb10
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143M18.bB6Ng01-143M18.g
ACCDH941639DH941640
length348584
definitionDH941639|Mus musculus domesticus DNA, BAC clone: B6Ng01-143M18, 5' end.DH941640|Mus musculus domesticus DNA, BAC clone: B6Ng01-143M18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atgtctgttaattcctgtgtgtgtacttgagagtgtgtatgcatgtatgt
atatgtacctagatgcacatatgcatatatgtccatatgtgtgtgtgtgt
gtgctgtgtgtatttgtatgtatgtttgtgagtttgcattcacgtgtgtg
tatgttatgtgcagtgtatatgtgttgtatgtgcatgcaggtatgtatat
gtgtatatatgtgtgctgcatgtgtgtggatgtatatatatatgtgtata
tgtatgtgtatacacatgtggagcgcacataccaacacatatatatacat
gtgtgcacgcataaaacatatacactgtacataggtgtacacacgtgt

gaattctttttatgtcacagtcagaatgaccggcttgtagctttgctaag
agggctttccgctgtggatgaagccatgcacctgtaattagagagcaaag
ctcctttgaagggcggcttcccataaagctatgtgatagttcctgccatg
tcccccgtggagctaggtgtctccttttggggtgataactgggttgagca
ttcagaaaggatatttcaccagggatggcattgagattcatgctgagata
atttggtaaatttggacaataactacttcatatatactctggggaggttc
tttttttgaatggaagaaagatcacaaaaagcaaaagggtaagaaaggaa
ttgtttgacttcctcacttgaaaacatagttatttattgttatttttaat
gcattccaacttttatctaaggattttaagtaaaactatacatttaatca
taattacttagttactttattgtctttaatatttgttttcatttagcata
atggatttctgtcttggactaaaaacattttatatgtgtttatttgtatg
tgtgtgtttgtatatgtttttgtgtgtatgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12253585_12254168
seq2: B6Ng01-143M18.g_68_651 (reverse)

seq1  CACACATACACACAAAAACATATACAAACACACACATACAAATAAACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATACACACAAAAACATATACAAACACACACATACAAATAAACACA  50

seq1  TATAAAATGTTTTTAGTCCAAGACAGAAATCCATTATGCTAAATGAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATGTTTTTAGTCCAAGACAGAAATCCATTATGCTAAATGAAAAC  100

seq1  AAATATTAAAGACAATAAAGTAACTAAGTAATTATGATTAAATGTATAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAAAGACAATAAAGTAACTAAGTAATTATGATTAAATGTATAGT  150

seq1  TTTACTTAAAATCCTTAGATAAAAGTTGGAATGCATTAAAAATAACAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTAAAATCCTTAGATAAAAGTTGGAATGCATTAAAAATAACAATA  200

seq1  AATAACTATGTTTTCAAGTGAGGAAGTCAAACAATTCCTTTCTTACCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTATGTTTTCAAGTGAGGAAGTCAAACAATTCCTTTCTTACCCTT  250

seq1  TTGCTTTTTGTGATCTTTCTTCCATTCAAAAAAAGAACCTCCCCAGAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTTGTGATCTTTCTTCCATTCAAAAAAAGAACCTCCCCAGAGTA  300

seq1  TATATGAAGTAGTTATTGTCCAAATTTACCAAATTATCTCAGCATGAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAAGTAGTTATTGTCCAAATTTACCAAATTATCTCAGCATGAATC  350

seq1  TCAATGCCATCCCTGGTGAAATATCCTTTCTGAATGCTCAACCCAGTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGCCATCCCTGGTGAAATATCCTTTCTGAATGCTCAACCCAGTTAT  400

seq1  CACCCCAAAAGGAGACACCTAGCTCCACGGGGGACATGGCAGGAACTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCAAAAGGAGACACCTAGCTCCACGGGGGACATGGCAGGAACTATC  450

seq1  ACATAGCTTTATGGGAAGCCGCCCTTCAAAGGAGCTTTGCTCTCTAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGCTTTATGGGAAGCCGCCCTTCAAAGGAGCTTTGCTCTCTAATTA  500

seq1  CAGGTGCATGGCTTCATCCACAGCGGAAAGCCCTCTTAGCAAAGCTACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGCATGGCTTCATCCACAGCGGAAAGCCCTCTTAGCAAAGCTACAA  550

seq1  GCCGGTCATTCTGACTGTGACATAAAAAGAATTC  584
      ||||||||||||||||||||||||||||||||||
seq2  GCCGGTCATTCTGACTGTGACATAAAAAGAATTC  584


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