BAC Information

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BAC

Clone NameB6Ng01-144E22
Chromosome11 (Build37)
Map Location 44,093,424 - 44,280,845
singlet/doubletdoublet
Overlap geneIl12b, Ublcp1
Upstream geneEG544767, Pttg1, Slu7, LOC100039392, C1qtnf2, Ccnjl, Fabp6, LOC620562, 4631424J17Rik, Ttc1, Adra1b
Downstream gene3732413I11Rik, Ebf1, LOC382510
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144E22.bB6Ng01-144E22.g
ACCDH942019DH942020
length1,123782
definitionDH942019|Mus musculus domesticus DNA, BAC clone: B6Ng01-144E22, 5' end.DH942020|Mus musculus domesticus DNA, BAC clone: B6Ng01-144E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,279,721 - 44,280,845)(44,093,424 - 44,094,204)
sequence
gaattcctctcaaacgttaattgaacataggtgtccgttgtggagggact
tgcctctgcagcataaatccagccaaacagagcagcagggtaggtagctc
attggtcctctctaggtgaacaagaggaggagtctgaaagagtggtagga
aatactaacattaagccaaaataagtaggaaaattgtcacgtgtagaatt
cggggaggtcctctctgaggaggcacagttatctctaccatcagactgta
cagcagagttcaggctgcacatacaagtttgtgtttgacctgtcagtttt
catttcctcgtttacatgtgcctgtctcctaggtgttttgttcctacaga
aagtcctgcttcatatgcgtgaagaatggcactccccatcatagtgaaat
ggggtgggcaggagtactcagtgaccacgctctcagaagatgatactgtg
ctggatcttaaacagttcctcaagacccttacgggagtgctcccagaacg
ccagaagttactagggctcaaagttaaaggtaatgcccacttcatggttt
ccacactaacagttagggcttttcatatttgccattataggctttttttt
ttttttaagaaatctttcaaaaaaagagatttttaaaagaaagctttaaa
attttttttaaaatttctttttattttccttaacttgtttaagtagtaaa
aataagaataattaatgtagttgaaaataccactactatttagatgacgt
tggctcccctgacagttgatatttacttgttaaggctttgacacagaaat
cccagatgaatcatttatttctggcatctgcactttacctttcattatgt
ccttgggccttatattctcctcagattgtctctcctttcagaagtggaga
ttatgtttattgccattgttccttcctagctccctgtatcttttgtgtca
ttgaccagtgagtttggaggaaagaagtctgtaagttagtcttggcttca
ggctttctaggacagcactttcttttatcttgagcttcgcttaatacact
attgggccgaatgggactcaggactcaacccttgtttgacttggggacta
ctgtgcttgagacatatttagga
gaattcaccttttctccctatggtgatttgaatgagaaatgtctcccaca
gtcctaggtatttgggcacttagtccccagttagtgatgtttggaaggca
tggaacctttgggaggtggagccttgcctgaggaattaaatcacttgggg
tgtgctttgagagtttattgtttcaccacctttccattctctttctttcc
tctattcacgtgcccttgaggttccagtctagttatttgctgccacattg
ctcccacagttagagactctgcctctggaatagtaagccagtacaactct
ttctttttattggagttgttttgggacagaatcttttaccacagctctag
caaagtaactaatattcctgggttttgatttggttgtttggtctggtttt
ggtttttctgatttttaagtgacctatcttattttatgcatgagcacata
tatatagtatgtattttttgttatgtgtgcatatgtgtatggaggtgcct
gactgtgccagtgtaagtagagaccagagaccaatgccagatctctttct
tgatcacgcaaatctattttttctcttttaaaaaattcaatgtctgagaa
tttcgtacctcagtataatgtgttttgatcaaagccaccttccattcctt
ccctacaaactctcctgtatttcaccactgcttttcccacccaatttcat
gcacacctttttggggttttttaatcaacctagtgaacttagagctacct
catgtacattggttaggggggagggtgggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_44279721_44280845
seq2: B6Ng01-144E22.b_48_1170 (reverse)

seq1  TCCTAAATATGTATCTAGCACAGTAAGTCACAAGTCATACAAGGGTTGGG  50
      |||||||||||| || |||||||||   | ||||||| |||||||||| |
seq2  TCCTAAATATGTCTCAAGCACAGTAGTCCCCAAGTCAAACAAGGGTTGAG  50

seq1  TCCCTGAGTCCCATCTGGCCCATTAGTGTACTAAGCGAAGCTCAAGAT-A  99
      | ||||||||||||  |||||| ||||||| ||||||||||||||||| |
seq2  T-CCTGAGTCCCATTCGGCCCAATAGTGTATTAAGCGAAGCTCAAGATAA  99

seq1  AAGAAAGTGCTGTCCTAGAAGCCCTGAAGCCAAAGACTAACCTACAGACT  149
      ||||||||||||||||||||  ||||||||| ||||||||| ||||||||
seq2  AAGAAAGTGCTGTCCTAGAAAGCCTGAAGCC-AAGACTAACTTACAGACT  148

seq1  CTCTTCCTCCAAACTCACCTGTCAATGACACAAAAGATACAGGGGAGCTA  199
         |||||||||||||||  ||||||||||||||||||||| ||||||||
seq2  TCTTTCCTCCAAACTCACTGGTCAATGACACAAAAGATACA-GGGAGCTA  197

seq1  GGAAGGAACAATGGCAATAAAACATAATCTCCACTTCTGAAAGGAGAGAC  249
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGAAGGAACAATGGCAAT-AAACATAATCTCCACTTCTGAAAGGAGAGAC  246

seq1  AATCTGAGGAGAATATAAGGCCCAA-GACATAATGAAAGGTAAAGTGCAG  298
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AATCTGAGGAGAATATAAGGCCCAAGGACATAATGAAAGGTAAAGTGCAG  296

seq1  ATGCCAGAAATAAATGATTCATCTGGGATTTCTGTGTCAAAGCCTTAACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGAAATAAATGATTCATCTGGGATTTCTGTGTCAAAGCCTTAACA  346

seq1  AGTAAATATCAACTGTCAGGGGAGCCAACGTCATCTAAATAGTAGTGGTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATATCAACTGTCAGGGGAGCCAACGTCATCTAAATAGTAGTGGTA  396

seq1  TTTTCAACTACATTAATTATTCTTATTTTTACTACTTAAACAAGTTAAGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAACTACATTAATTATTCTTATTTTTACTACTTAAACAAGTTAAGG  446

seq1  AAAATAAAAAGAAATTTTAAAAAAAATTTTAAAGCTTTCTTTTAAAAATC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAAGAAATTTTAAAAAAAATTTTAAAGCTTTCTTTTAAAAATC  496

seq1  TCTTTTTTTGAAAGATTTCTTAAAAAAAAAAAAAAGCCTATAATGGCAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTGAAAGATTTCTTAAAAAAAAAAAAAAGCCTATAATGGCAAA  546

seq1  TATGAAAAGCCCTAACTGTTAGTGTGGAAACCATGAAGTGGGCATTACCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAAGCCCTAACTGTTAGTGTGGAAACCATGAAGTGGGCATTACCT  596

seq1  TTAACTTTGAGCCCTAGTAACTTCTGGCGTTCTGGGAGCACTCCCGTAAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTTGAGCCCTAGTAACTTCTGGCGTTCTGGGAGCACTCCCGTAAG  646

seq1  GGTCTTGAGGAACTGTTTAAGATCCAGCACAGTATCATCTTCTGAGAGCG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTGAGGAACTGTTTAAGATCCAGCACAGTATCATCTTCTGAGAGCG  696

seq1  TGGTCACTGAGTACTCCTGCCCACCCCATTTCACTATGATGGGGAGTGCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACTGAGTACTCCTGCCCACCCCATTTCACTATGATGGGGAGTGCC  746

seq1  ATTCTTCACGCATATGAAGCAGGACTTTCTGTAGGAACAAAACACCTAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCACGCATATGAAGCAGGACTTTCTGTAGGAACAAAACACCTAGG  796

seq1  AGACAGGCACATGTAAACGAGGAAATGAAAACTGACAGGTCAAACACAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGCACATGTAAACGAGGAAATGAAAACTGACAGGTCAAACACAAA  846

seq1  CTTGTATGTGCAGCCTGAACTCTGCTGTACAGTCTGATGGTAGAGATAAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATGTGCAGCCTGAACTCTGCTGTACAGTCTGATGGTAGAGATAAC  896

seq1  TGTGCCTCCTCAGAGAGGACCTCCCCGAATTCTACACGTGACAATTTTCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTCCTCAGAGAGGACCTCCCCGAATTCTACACGTGACAATTTTCC  946

seq1  TACTTATTTTGGCTTAATGTTAGTATTTCCTACCACTCTTTCAGACTCCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATTTTGGCTTAATGTTAGTATTTCCTACCACTCTTTCAGACTCCT  996

seq1  CCTCTTGTTCACCTAGAGAGGACCAATGAGCTACCTACCCTGCTGCTCTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGTTCACCTAGAGAGGACCAATGAGCTACCTACCCTGCTGCTCTG  1046

seq1  TTTGGCTGGATTTATGCTGCAGAGGCAAGTCCCTCCACAACGGACACCTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTGGATTTATGCTGCAGAGGCAAGTCCCTCCACAACGGACACCTA  1096

seq1  TGTTCAATTAACGTTTGAGAGGAATTC  1125
      |||||||||||||||||||||||||||
seq2  TGTTCAATTAACGTTTGAGAGGAATTC  1123

seq1: chr11_44093424_44094204
seq2: B6Ng01-144E22.g_67_848

seq1  GAATTCACCTTTTCTCCCTATGGTGATTTGAATGAGAAATGTCTCCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTTTCTCCCTATGGTGATTTGAATGAGAAATGTCTCCCACA  50

seq1  GTCCTAGGTATTTGGGCACTTAGTCCCCAGTTAGTGATGTTTGGAAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAGGTATTTGGGCACTTAGTCCCCAGTTAGTGATGTTTGGAAGGCA  100

seq1  TGGAACCTTTGGGAGGTGGAGCCTTGCCTGAGGAATTAAATCACTTGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACCTTTGGGAGGTGGAGCCTTGCCTGAGGAATTAAATCACTTGGGG  150

seq1  TGTGCTTTGAGAGTTTATTGTTTCACCACCTTTCCATTCTCTTTCTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTTGAGAGTTTATTGTTTCACCACCTTTCCATTCTCTTTCTTTCC  200

seq1  TCTATTCACGTGCCCTTGAGGTTCCAGTCTAGTTATTTGCTGCCACATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCACGTGCCCTTGAGGTTCCAGTCTAGTTATTTGCTGCCACATTG  250

seq1  CTCCCACAGTTAGAGACTCTGCCTCTGGAATAGTAAGCCAGTACAACTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACAGTTAGAGACTCTGCCTCTGGAATAGTAAGCCAGTACAACTCT  300

seq1  TTCTTTTTATTGGAGTTGTTTTGGGACAGAATCTTTTACCACAGCTCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTATTGGAGTTGTTTTGGGACAGAATCTTTTACCACAGCTCTAG  350

seq1  CAAAGTAACTAATATTCCTGGGTTTTGATTTGGTTGTTTGGTCTGGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTAACTAATATTCCTGGGTTTTGATTTGGTTGTTTGGTCTGGTTTT  400

seq1  GGTTTTTCTGATTTTTAAGTGACCTATCTTATTTTATGCATGAGCACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTCTGATTTTTAAGTGACCTATCTTATTTTATGCATGAGCACATA  450

seq1  TATATAGTATGTATTTTTTGTTATGTGTGCATATGTGTATGGAGGTGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGTATGTATTTTTTGTTATGTGTGCATATGTGTATGGAGGTGCCT  500

seq1  GACTGTGCCAGTGTAAGTAGAGACCAGAGACCAATGCCAGATCTCTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGCCAGTGTAAGTAGAGACCAGAGACCAATGCCAGATCTCTTTCT  550

seq1  TGATCACGCAAATCTATTTTTTCTCTTTTAAAAAATTCAATGTCTGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACGCAAATCTATTTTTTCTCTTTTAAAAAATTCAATGTCTGAGAA  600

seq1  TTTCGTACCTCAGTATAATGTGTTTTGATCAAAGCCACCTTCCATTCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTACCTCAGTATAATGTGTTTTGATCAAAGCCACCTTCCATTCCTT  650

seq1  CCCTACAAACTCTCCTGTATTTCACCACTGCTTTTCCCACCCAATTTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACAAACTCTCCTGTATTTCACCACTGCTTTTCCCACCCAATTTCAT  700

seq1  GCACACCTTTTTGGGGTTTTTTAATCAACCTAGTGAACTTAGAGCTACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACCTTTTTGGGGTTTTTTAATCAACCTAGTGAACTTAGAGCTACCT  750

seq1  CATGTACATTGGTTA-GGGGGAGGGTGGGAGA  781
      ||||||||||||||| |||||||||||||| |
seq2  CATGTACATTGGTTAGGGGGGAGGGTGGGAAA  782