BAC Information

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BAC

Clone NameB6Ng01-145E19
Chromosome11 (Build37)
Map Location 12,546,836 - 12,547,409
singlet/doubletsinglet
Overlap genenone
Upstream geneIkzf1, Fignl1, Ddc, Grb10, Cobl
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145E19.bB6Ng01-145E19.g
ACCDH942739DH942740
length1,148570
definitionDH942739|Mus musculus domesticus DNA, BAC clone: B6Ng01-145E19, 5' end.DH942740|Mus musculus domesticus DNA, BAC clone: B6Ng01-145E19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcatctgattcagagctactaagagctggctccttgagctcacctagtga
tgagtatctcctagagacctccgctaattgatcttttttcttttctttcc
ttctaatctctccccaggtattcttacctgacctaaacttttcctcgggt
tcaagacccgtggaaaggcctgtatacttattttgtgtaccatatttcct
ctttgctcctactctctctccccgctttacttctgatagattgtctcgaa
tttcgtccagaatccgccctgccttaaccacttgataacatgtgaaaagg
aacaaaagggcttctaacactagaaaaagttcaaggccaaacataccttg
taaagctatttcccactttacttctgatagactgtcttgaatttcgttag
aaagttcaagaccagacttaccttgtaaagctatttcccactttacttct
gatagactgtcttgaattttgttagaaagttcaaggccagacttaccttg
taaagctatacttacgggtaccctgttccccagctgaagagttctgaatt
cacgcagttgaatccttctcaacagtctgttttacgggaacctttatgac
cgtgacccgcagttctggttccggaatgaggaatcttccttgcgccggtg
atggttaactcccgtcccgagtttttcttcccgggtttccggcaccaact
cttacacgcgttctcacgaccggccaggaaagacacaacaaaccagaatc
ttctgcggcaaaactttattgcttacatcttcaggagcaagagtgcaaaa
ctcaaacccaaaaacgaaagcgaaaccccgtccctatttcggagagttac
ccttcgcctaggacgtatcactccctgattggctgcagcccatggccgag
ttgtcgtcacgggaagcagagtacatggggtggagaaataccctggcaca
tgcgcagatatttgttaccactagaacacagctgtcagcgcatctgtgac
gcgaatgtggggcgcttccccatagaatgtcccatatgctcttcatgttt
ttagctacaataaatctcatctgcaaaggaacagatcctgagagattgat
cgaaatccaaatctgtagatgaattggtggtgtgtgtatgtgtcttct
atttattagaagatattcatatcaaggtctgtgtgaccttaaaaatctat
gccagtctccatatcacccttctttagaagaattatcttctttggctact
aggtaatgaactgacgatgaatgagagaaatcactgagctcctaatacct
agaaggagtgcagtgtgaagcaatgaatgtcccagggccaggctggaaga
gctaaaaccgtttaaaagtttacaaagtttagtcaccttcccctctgcac
tttaccctgatgctggaacttcaagttctaggtcattactctaacaatat
ccagctcatcttgagcagcagggtataatattgacaaatggagggactaa
gcctactgatagagtcttggatttgttaccaagaaacaaagggtccttgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatagcctttcttagtttt
gcagacaagggaatttaggaataggcctcaagagaactagaaaacggttt
tgttggaatttgagagagaaaaaataatagggcaggccaactgaattttt
ggcagctaccatgggaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12546836_12547409
seq2: B6Ng01-145E19.g_68_643

seq1  GAATTCATTTATTAGAAGATATTCATATCAAGGTCTGTGTGACCTTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATTAGAAGATATTCATATCAAGGTCTGTGTGACCTTAAAA  50

seq1  ATCTATGCCAGTCTCCATATCACCCTTCTTTAGAAGAATTATCTTCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGCCAGTCTCCATATCACCCTTCTTTAGAAGAATTATCTTCTTTG  100

seq1  GCTACTAGGTAATGAACTGACGATGAATGAGAGAAATCACTGAGCTCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTAGGTAATGAACTGACGATGAATGAGAGAAATCACTGAGCTCCTA  150

seq1  ATACCTAGAAGGAGTGCAGTGTGAAGCAATGAATGTCCCAGGGCCAGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTAGAAGGAGTGCAGTGTGAAGCAATGAATGTCCCAGGGCCAGGCT  200

seq1  GGAAGAGCTAAAACCGTTTAAAAGTTTACAAAGTTTAGTCACCTTCCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGCTAAAACCGTTTAAAAGTTTACAAAGTTTAGTCACCTTCCCCT  250

seq1  CTGCACTTTACCCTGATGCTGGAACTTCAAGTTCTAGGTCATTACTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTTTACCCTGATGCTGGAACTTCAAGTTCTAGGTCATTACTCTAA  300

seq1  CAATATCCAGCTCATCTTGAGCAGCAGGGTATAATATTGACAAATGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCCAGCTCATCTTGAGCAGCAGGGTATAATATTGACAAATGGAGG  350

seq1  GACTAAGCCTACTGATAGAGTCTTGGATTTGTTACCAAGAAACAAAGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAGCCTACTGATAGAGTCTTGGATTTGTTACCAAGAAACAAAGGGT  400

seq1  CCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAGCCTTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAGCCTTTCTT  450

seq1  AGTTTTGCAGACAAGGGAATTTCAGAATAGGCCTCAAGAGAACTAGAAAA  500
      ||||||||||||||||||||||  ||||||||||||||||||||||||||
seq2  AGTTTTGCAGACAAGGGAATTTAGGAATAGGCCTCAAGAGAACTAGAAAA  500

seq1  CGGTTTTGTTGGAATTTGAGAGAG-AAAAATAATAGGGCAGGCCAACTGA  549
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CGGTTTTGTTGGAATTTGAGAGAGAAAAAATAATAGGGCAGGCCAACTGA  550

seq1  AATTTAGGCAGCTACCA-GGGAAAGG  574
      | ||| ||||||||||| ||||||||
seq2  ATTTTTGGCAGCTACCATGGGAAAGG  576