BAC Information

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BAC

Clone NameB6Ng01-145H19
Chromosome11 (Build37)
Map Location 12,185,664 - 12,186,831
singlet/doubletsinglet
Overlap geneCobl
Upstream geneZpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc, Grb10
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145H19.bB6Ng01-145H19.g
ACCDH942877DH942878
length1,163737
definitionDH942877|Mus musculus domesticus DNA, BAC clone: B6Ng01-145H19, 5' end.DH942878|Mus musculus domesticus DNA, BAC clone: B6Ng01-145H19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtattgcatgtctttgtcagataggactgatgagtttgacttc
tgtacacacttttctttatccttcagagaattctcagctgtctcaatgct
aatgagcaagcactcatctttccatacaacaacaaaacacaggaatgaat
tagccctggcttcccctgggagcactgcagagagtgttgagttgaaatgc
ctggagtggacacttcttgccacttcagagacacaagcttatcttcagac
cagctcagtgctgatcaaaaagtctgaaacttaggcctgagctctactgc
tacactgactttcagtatctggtgagggtacaggatcctcaagctacaga
gaggcagttgagccctaaagcatatttccttggctgtgactcctgtactt
ctcataggacgggtaaaagaagcatgaagggagggaaagagagaagccct
tccaaatatccatgctggatattcagttacaccctgggaaagccgatttt
ggagaaattacaccattgctaattgcataattaattttctgaacaacttc
agagtatgagaagaataatagttttttaatgaaatgtggatatgttaatc
ctgcctactgtttgggtctaatgtttgatgcaattacccctcagtagtca
cagagaactctggatgtctaggtcacctacatgaagtggtgtagtatttc
catgtaacctacataatcctcacatatatcatttacattatctctagatt
acttatactactgaatataatataaatggttgtgttgtttaaaggaaatg
acaagaaaacagtcaatacatgtttattagagacacaatgctttacttgt
gggacttatagatgcatagagatatatctgtgtgtgttttacagtcatgt
atctcaagagaaactgtattaaagtagagactggttcatgtgactagaga
cagaaagccctaccatctgccatctgtaggctacagcctcagaataccag
aaagcgagtcagttttagttgtagaattccttcagccagaagtctgctgt
caaggtgatgagaatgcccccaggcaaacaagcattttgttgtctttctg
accctggccagaatggatgcttcattctgtggaagctgacctccagagct
tgtctttatctta

gaattcttaagtgagaatctccatcttaagtggctatctccaatggccga
gaaacacctatagaaatgtttaatctccttagtcatcagggaaatacaaa
taacccagagattccaccttccaccaataagaatggctatgaacaaaaac
tcaggtgacagcagatgctggcaagaatgtggagaaagaggaacactgct
ccattgctggtgggattgcaaactggtacaaccactctggaaatcaatct
ggtggttcttcagaaaattagaaatagttctacctgaagacccaaatatt
acaatatgtcatattacaaggacatatcctataccaagttcatagtagcc
agaaacttgtaacaacccaatgtcccatgacagacagaatggatacagaa
aatatggtacatttacataatggaatacaactgagctattaaaaatgagg
acatcacccattttgcaggcaaatgtatggaacttgaaaatatcattctg
aatgaggtaatccagacctcaaaggacatacatggtatgtactcactgat
cagtggatattagccccaaagttcaaaatacccatgatataactcacaga
ccagatgaagcttaacaagaaggcacaagtgaggatgcttcaatctcact
tagaaggggaacaaaataatcacagaaggtagagggaggtagggatgatc
ctgggttgaagagaagaggatggaaagaggagggcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12185664_12186831
seq2: B6Ng01-145H19.b_48_1210 (reverse)

seq1  TAAGAAAAAGACATGCCTTCTGGAGGTCAGGCTTCACAGAATGAAGCATC  50
      ||||| ||||||| ||  ||||||||||||  | ||||||||||||||||
seq2  TAAGATAAAGACAAGC--TCTGGAGGTCAGCTTCCACAGAATGAAGCATC  48

seq1  CAATCTGCCCAGGGTCAG-AAGACAACAAAATGCTTTGTTTGCCTGGGGG  99
      || |||| |||||||||| ||||||||||||||| |||||||||||||||
seq2  CATTCTGGCCAGGGTCAGAAAGACAACAAAATGC-TTGTTTGCCTGGGGG  97

seq1  CA-TCTCATCACCTTTGGACAGCAGAACCTCTGGCTTGAGGAATCTTAC-  147
      || ||||||||||||  |||||||| || |||||||  ||||||  ||| 
seq2  CATTCTCATCACCTT--GACAGCAG-ACTTCTGGCTGAAGGAATTCTACA  144

seq1  ACTAAAACTGACTCGCCTTTCTGGTATTCTGAGGCTGTAGCCTACAGATG  197
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACTAAAACTGACTCG-CTTTCTGGTATTCTGAGGCTGTAGCCTACAGATG  193

seq1  GCAGATGGTAGGGCTTTCTGTTCTCTAGTCACATGAACCAGTCTCTACTT  247
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCAGATGGTAGGGCTTTCTG-TCTCTAGTCACATGAACCAGTCTCTACTT  242

seq1  TAATACAGTTTCTCTTGAGATACATGACTGTAAAACACACACAGATATAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACAGTTTCTCTTGAGATACATGACTGTAAAACACACACAGATATAT  292

seq1  CTCTATGCATCTATAAGTCCCACAAGTAAAGCATTGTGTCTCTAATAAAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGCATCTATAAGTCCCACAAGTAAAGCATTGTGTCTCTAATAAAC  342

seq1  ATGTATTGACTGTTTTCTTGTCATTTCCTTTAAACAACACAACCATTTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTGACTGTTTTCTTGTCATTTCCTTTAAACAACACAACCATTTAT  392

seq1  ATTATATTCAGTAGTATAAGTAATCTAGAGATAATGTAAATGATATATGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTCAGTAGTATAAGTAATCTAGAGATAATGTAAATGATATATGT  442

seq1  GAGGATTATGTAGGTTACATGGAAATACTACACCACTTCATGTAGGTGAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTATGTAGGTTACATGGAAATACTACACCACTTCATGTAGGTGAC  492

seq1  CTAGACATCCAGAGTTCTCTGTGACTACTGAGGGGTAATTGCATCAAACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACATCCAGAGTTCTCTGTGACTACTGAGGGGTAATTGCATCAAACA  542

seq1  TTAGACCCAAACAGTAGGCAGGATTAACATATCCACATTTCATTAAAAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACCCAAACAGTAGGCAGGATTAACATATCCACATTTCATTAAAAAA  592

seq1  CTATTATTCTTCTCATACTCTGAAGTTGTTCAGAAAATTAATTATGCAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATTCTTCTCATACTCTGAAGTTGTTCAGAAAATTAATTATGCAAT  642

seq1  TAGCAATGGTGTAATTTCTCCAAAATCGGCTTTCCCAGGGTGTAACTGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATGGTGTAATTTCTCCAAAATCGGCTTTCCCAGGGTGTAACTGAA  692

seq1  TATCCAGCATGGATATTTGGAAGGGCTTCTCTCTTTCCCTCCCTTCATGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGCATGGATATTTGGAAGGGCTTCTCTCTTTCCCTCCCTTCATGC  742

seq1  TTCTTTTACCCGTCCTATGAGAAGTACAGGAGTCACAGCCAAGGAAATAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTACCCGTCCTATGAGAAGTACAGGAGTCACAGCCAAGGAAATAT  792

seq1  GCTTTAGGGCTCAACTGCCTCTCTGTAGCTTGAGGATCCTGTACCCTCAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGGGCTCAACTGCCTCTCTGTAGCTTGAGGATCCTGTACCCTCAC  842

seq1  CAGATACTGAAAGTCAGTGTAGCAGTAGAGCTCAGGCCTAAGTTTCAGAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACTGAAAGTCAGTGTAGCAGTAGAGCTCAGGCCTAAGTTTCAGAC  892

seq1  TTTTTGATCAGCACTGAGCTGGTCTGAAGATAAGCTTGTGTCTCTGAAGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGATCAGCACTGAGCTGGTCTGAAGATAAGCTTGTGTCTCTGAAGT  942

seq1  GGCAAGAAGTGTCCACTCCAGGCATTTCAACTCAACACTCTCTGCAGTGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGAAGTGTCCACTCCAGGCATTTCAACTCAACACTCTCTGCAGTGC  992

seq1  TCCCAGGGGAAGCCAGGGCTAATTCATTCCTGTGTTTTGTTGTTGTATGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGGGAAGCCAGGGCTAATTCATTCCTGTGTTTTGTTGTTGTATGG  1042

seq1  AAAGATGAGTGCTTGCTCATTAGCATTGAGACAGCTGAGAATTCTCTGAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGAGTGCTTGCTCATTAGCATTGAGACAGCTGAGAATTCTCTGAA  1092

seq1  GGATAAAGAAAAGTGTGTACAGAAGTCAAACTCATCAGTCCTATCTGACA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAAGAAAAGTGTGTACAGAAGTCAAACTCATCAGTCCTATCTGACA  1142

seq1  AAGACATGCAATACAGAATTC  1168
      |||||||||||||||||||||
seq2  AAGACATGCAATACAGAATTC  1163


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