BAC Information

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BAC

Clone NameB6Ng01-145K14
Chromosome11 (Build37)
Map Location 62,656,498 - 62,770,266
singlet/doubletdoublet
Overlap geneFbxw10, Fam18b, Cdrt4
Upstream geneUlk2, Akap10, D630015H07, LOC626325, LOC100041558, Specc1, Adora2b, 2410012H22Rik, Ttc19, Ncor1, Pigl, Prr6, Ubb, Trpv2, 2410006H16Rik, BC046404, BC025076, Zfp287, LOC626482, LOC100042766, Zfp286, Trim16
Downstream geneTekt3, Pmp22, LOC433423, LOC100042799, LOC100041690, LOC654442, LOC668297, Hs3st3b1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145K14.bB6Ng01-145K14.g
ACCDH943004DH943005
length1,034482
definitionDH943004|Mus musculus domesticus DNA, BAC clone: B6Ng01-145K14, 5' end.DH943005|Mus musculus domesticus DNA, BAC clone: B6Ng01-145K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,769,224 - 62,770,266)(62,656,498 - 62,656,985)
sequence
gaattcctaaaattataacagtgattattaatctcttttataatgggact
gctattaggtccttttctgatagtcaaaactgcaatgagaactctgtcag
tctctgatatgtcaccagttaattgctcttagtcaccagactttctccta
ctcagagcacattccaaggttgtaaaacaattaaccaaaggtcataaaaa
gggaattaatgatttagtataggtgctaggacagaagataaaatattgac
tgggtttacatatacaaaacttcacttagttaacttaataatttagttat
ggtttttgactttcaatgaacctgctcaggtgatggatgtttagccatat
aattactcctaatgaatattcatgtgaacattctacattgtaaacttcta
tttcaatttatgatttgattttttgtgtaaatgtgtgatgaactttttaa
catgtgatcgtgtattctgaaagatgtataagtactgaggacaaagagat
tagaggagaatatttttttccctttccacttagaaaaatgttttcccttt
cccctcttagagtagaatttttcccttgctcctcttaggatctttctgct
tttcccctttttcttagatagctttaataggaaactttttacaacttagt
aataaacactataatcacttttcaaaatttcctttttttcttcctgcgac
ttcccactagcagcctgaaagttagagccaggaagttcctgctgaaatag
aacaaaggccacgttacttaatccccccatccccaccccaccccaccccg
ttgttaggctacgggtgtcaatcacctaagctagcagccttttaccctca
gaaagagcaagaaagtttctaggactttttttagaagttatcaccagcaa
ttcagtatagttagagagctagaatatccggagacctcagactttaaacc
acaccagagtcctactctgtgcccccccacgcacccaccccccaccaccc
cactccttacttgcattaccctctcaggtgggag
tgctttagagtaatggcacatttgtgagtctgttatttccagaagatttt
ttttgagacctgagattacaggtgtgtgtgccctgtctggtgagattaca
gatgtgtgtcccctgtctgctgagattacaggtgtgtgtgccctgtctgg
tgagattacagatgtgtgtcccctgtctgctgagattacaggtgtgtgca
ctctgtctgctgagattacaggtatatgtgccctgtctgctgagattaca
gatgtatgtgttctgtctggtgaggttacagatgtgtgtaccctatctgg
tgagattacagatgtgcctccttaccctgcctttttggcgctgggattga
acctgggatttcatgcattctatgcaatgtgcaatgtgcaatgtgctcta
caaagcatccccagcccttctttatttaaaaattccatttattgattgat
ttggtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_62769224_62770266
seq2: B6Ng01-145K14.b_54_1082 (reverse)

seq1  CTCCCAACCTGGAGAGGGTAATGGCAGGGTAAGGAGTGGGGGTGGGGTGG  50
      ||||| |||| ||||||||||||  |  ||||||||| ||||||| | ||
seq2  CTCCC-ACCT-GAGAGGGTAATGCAA--GTAAGGAGT-GGGGTGGTGGGG  45

seq1  GGGGGGTGGGTGGCGGTGGGGGGGGCACAGAGTAGGACTCTGGTGTGGTT  100
      || ||||| ||       |||||||||||||||||||||||||||||| |
seq2  GGTGGGTGCGT-------GGGGGGGCACAGAGTAGGACTCTGGTGTGG-T  87

seq1  TTAAAGTCTGAGGGTCTCCGGATATTCTAGCTCTCTAACTATACTGAATT  150
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTCTGA-GGTCTCCGGATATTCTAGCTCTCTAACTATACTGAATT  136

seq1  GCTGGTGATAACTTCTAAAAAAAGTCCTAGAAACTTTCTTGCTCTTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGATAACTTCTAAAAAAAGTCCTAGAAACTTTCTTGCTCTTTCTG  186

seq1  AGGGTAAAAGGCTGCTAGCTTAGGTGATTGACACCCGTAGCCTAACAACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAAAAGGCTGCTAGCTTAGGTGATTGACACCCGTAGCCTAACAACG  236

seq1  GGGTGGGGTGGGGTGGGGATGGGGGGATTAAGTAACGTGGCCTTTGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGGTGGGGTGGGGATGGGGGGATTAAGTAACGTGGCCTTTGTTCT  286

seq1  ATTTCAGCAGGAACTTCCTGGCTCTAACTTTCAGGCTGCTAGTGGGAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGCAGGAACTTCCTGGCTCTAACTTTCAGGCTGCTAGTGGGAAGT  336

seq1  CGCAGGAAGAAAAAAAGGAAATTTTGAAAAGTGATTATAGTGTTTATTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGAAGAAAAAAAGGAAATTTTGAAAAGTGATTATAGTGTTTATTAC  386

seq1  TAAGTTGTAAAAAGTTTCCTATTAAAGCTATCTAAGAAAAAGGGGAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGTAAAAAGTTTCCTATTAAAGCTATCTAAGAAAAAGGGGAAAAG  436

seq1  CAGAAAGATCCTAAGAGGAGCAAGGGAAAAATTCTACTCTAAGAGGGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGATCCTAAGAGGAGCAAGGGAAAAATTCTACTCTAAGAGGGGAA  486

seq1  AGGGAAAACATTTTTCTAAGTGGAAAGGGAAAAAAATATTCTCCTCTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAACATTTTTCTAAGTGGAAAGGGAAAAAAATATTCTCCTCTAAT  536

seq1  CTCTTTGTCCTCAGTACTTATACATCTTTCAGAATACACGATCACATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGTCCTCAGTACTTATACATCTTTCAGAATACACGATCACATGTT  586

seq1  AAAAAGTTCATCACACATTTACACAAAAAATCAAATCATAAATTGAAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTTCATCACACATTTACACAAAAAATCAAATCATAAATTGAAATA  636

seq1  GAAGTTTACAATGTAGAATGTTCACATGAATATTCATTAGGAGTAATTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTACAATGTAGAATGTTCACATGAATATTCATTAGGAGTAATTAT  686

seq1  ATGGCTAAACATCCATCACCTGAGCAGGTTCATTGAAAGTCAAAAACCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTAAACATCCATCACCTGAGCAGGTTCATTGAAAGTCAAAAACCAT  736

seq1  AACTAAATTATTAAGTTAACTAAGTGAAGTTTTGTATATGTAAACCCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAATTATTAAGTTAACTAAGTGAAGTTTTGTATATGTAAACCCAGT  786

seq1  CAATATTTTATCTTCTGTCCTAGCACCTATACTAAATCATTAATTCCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTTTATCTTCTGTCCTAGCACCTATACTAAATCATTAATTCCCTT  836

seq1  TTTATGACCTTTGGTTAATTGTTTTACAACCTTGGAATGTGCTCTGAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGACCTTTGGTTAATTGTTTTACAACCTTGGAATGTGCTCTGAGTA  886

seq1  GGAGAAAGTCTGGTGACTAAGAGCAATTAACTGGTGACATATCAGAGACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGTCTGGTGACTAAGAGCAATTAACTGGTGACATATCAGAGACT  936

seq1  GACAGAGTTCTCATTGCAGTTTTGACTATCAGAAAAGGACCTAATAGCAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGTTCTCATTGCAGTTTTGACTATCAGAAAAGGACCTAATAGCAG  986

seq1  TCCCATTATAAAAGAGATTAATAATCACTGTTATAATTTTAGG  1043
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTATAAAAGAGATTAATAATCACTGTTATAATTTTAGG  1029

seq1: chr11_62656498_62656985
seq2: B6Ng01-145K14.g_69_556

seq1  GAATTCTGCTTTAGAGTAATGGCACATTTGTGAGTCTGTTATTTCCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTTTAGAGTAATGGCACATTTGTGAGTCTGTTATTTCCAGAA  50

seq1  GATTTTTTTTGAGACCTGAGATTACAGGTGTGTGTGCCCTGTCTGGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTTTGAGACCTGAGATTACAGGTGTGTGTGCCCTGTCTGGTGAG  100

seq1  ATTACAGATGTGTGTCCCCTGTCTGCTGAGATTACAGGTGTGTGTGCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGATGTGTGTCCCCTGTCTGCTGAGATTACAGGTGTGTGTGCCCT  150

seq1  GTCTGGTGAGATTACAGATGTGTGTCCCCTGTCTGCTGAGATTACAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGTGAGATTACAGATGTGTGTCCCCTGTCTGCTGAGATTACAGGTG  200

seq1  TGTGCACTCTGTCTGCTGAGATTACAGGTATATGTGCCCTGTCTGCTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACTCTGTCTGCTGAGATTACAGGTATATGTGCCCTGTCTGCTGAG  250

seq1  ATTACAGATGTATGTGTTCTGTCTGGTGAGGTTACAGATGTGTGTACCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGATGTATGTGTTCTGTCTGGTGAGGTTACAGATGTGTGTACCCT  300

seq1  ATCTGGTGAGATTACAGATGTGCCTCCTTACCCTGCCTTTTTGGCGCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTGAGATTACAGATGTGCCTCCTTACCCTGCCTTTTTGGCGCTGG  350

seq1  GATTGAACCTGGGATTTCATGCATTCTATGCAATGTGCAATGTGCAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAACCTGGGATTTCATGCATTCTATGCAATGTGCAATGTGCAATGT  400

seq1  GCTCTACAAAGCATCCCCAGCCCTTCTTTATTTAAAAATTCCATTTATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTACAAAGCATCCCCAGCCCTTCTTTATTTAAAAATTCCATTTATTG  450

seq1  ATTGATTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  488
      ||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  488