BAC Information

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BAC

Clone NameB6Ng01-148B15
Chromosome11 (Build37)
Map Location 87,210,191 - 87,368,138
singlet/doubletdoublet
Overlap geneRad51c, Tex14
Upstream gene0610013E23Rik, Rps6kb1, Tubd1, LOC100043687, Tmem49, Ptrh2, Cltc, Dhx40, Ypel2, Gdpd1, 1200011M11Rik, LOC668816, Prr11, 1110001A07Rik, Trim37, Ppm1e
Downstream geneSept4, Mtmr4, Hsf5, Rnf43, Supt4h1, Bzrap1, Mpo, Lpo, Mks1, Epx, Olfr462, Olfr463, Olfr464, Dynll2, Sfrs1, Vezf1, Cuedc1, Mrps23, 1700106J16Rik, LOC668793, Msi2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148B15.bB6Ng01-148B15.g
ACCDH944800DH944801
length674857
definitionDH944800|Mus musculus domesticus DNA, BAC clone: B6Ng01-148B15, 5' end.DH944801|Mus musculus domesticus DNA, BAC clone: B6Ng01-148B15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,210,191 - 87,210,864)(87,367,289 - 87,368,138)
sequence
gaattccaagacagccaaggctacacatagagaaaccctgtcttaaaaca
caaaacaaaccaaaaaaacaactggcataagaataagtatagctgccggg
cgtggtggcgcatgcctttaatcccagcactcaggaggcagaggcaggcg
gatttctgagttcgaggccagcctggtttacaaagtgagttccaggacag
tcagggctatatagagaaactgtgccttgaaacaaaaaaggagggtgcgg
ggcgggggaagaataggtatagctcaatagaatagaattcaaaaataaat
gtttggggctggcgagatggctcagtggttaagagcgccgactgctcttc
cgaaggtcccgagttcaaatcccagcaaccacatggtggcttacaaccat
ctgtaacaagatctgatgctctcttctggaatatctgaggacagctacaa
tgttcttacatataataaataaatctttaaaaataaataaataaataaat
gtatttgtgatcaacagatatttcaatcttaagaatatacaatgaatata
caatattttgaaatgtgaatagcatatgtgtgcaaaataagtaattaagt
ggagggcagggaaagaagcagctttggggggctaaagagatggctcagtg
gtcaagagccctgactgctcttcc
gaattcactcttggctaaatgtccacatcctctgggccctgtgccagtca
gagttctggaggaaataaaatgtacacatcgctggtacagataaagactc
cttaacaaagcggctatacacaaaggtataattagagttaagggacaaac
aaggacagacggcttcttttggctacagcggtggaaagcctaagtggaaa
gtggctaacagtggggatgggacagcaggatagttactaggacctagtgg
ggagaactggagctaggaaaggcaggatgcctgtgaaggacaccatggtt
accagatgcagggtgttcaaagaggtaggaaaggaagtgaatacaatttt
cttgccctctgatcttctgccagagactccagaaagtcaatgagatacag
tccactaggctaagcatcctgaggcataaagcagaaaccagggcagggaa
aggaccagaagggactagggaaaagatgtcagggacactagatgactcgg
aagggtgaacatctaactccccaagtaaagtaaacatagaaggggggggt
catctgtaaagatacactggaagcctggaactccatttagaatagttcta
aagttaaggtgaatttgtaacttttccatttactttgtaaactccgtttg
aattctgcaatatatagtttccccagtatccatgtaagctaaattttaaa
atgcttaagaagttgtattttatatttatgtgtatgtaaaatgtgtatat
gcacacgggcatatggaaggaggttagaggacaacttactgtagttggat
ctctccttttcttttttttttgttttttcgagacagggttttctctgtat
tagccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_87210191_87210864
seq2: B6Ng01-148B15.b_45_718

seq1  GAATTCCAAGACAGCCAAGGCTACACATAGAGAAACCCTGTCTTAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGACAGCCAAGGCTACACATAGAGAAACCCTGTCTTAAAACA  50

seq1  CAAAACAAACCAAAAAAACAACTGGCATAAGAATAAGTATAGCTGCCGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAACCAAAAAAACAACTGGCATAAGAATAAGTATAGCTGCCGGG  100

seq1  CGTGGTGGCGCATGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGTGGCGCATGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCG  150

seq1  GATTTCTGAGTTCGAGGCCAGCCTGGTTTACAAAGTGAGTTCCAGGACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTGAGTTCGAGGCCAGCCTGGTTTACAAAGTGAGTTCCAGGACAG  200

seq1  TCAGGGCTATATAGAGAAACTGTGCCTTGAAACAAAAAAGGAGGGTGCGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCTATATAGAGAAACTGTGCCTTGAAACAAAAAAGGAGGGTGCGG  250

seq1  GGCGGGGGAAGAATAGGTATAGCTCAATAGAATAGAATTCAAAAATAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGGAAGAATAGGTATAGCTCAATAGAATAGAATTCAAAAATAAAT  300

seq1  GTTTGGGGCTGGCGAGATGGCTCAGTGGTTAAGAGCGCCGACTGCTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGGCTGGCGAGATGGCTCAGTGGTTAAGAGCGCCGACTGCTCTTC  350

seq1  CGAAGGTCCCGAGTTCAAATCCCAGCAACCACATGGTGGCTTACAACCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGGTCCCGAGTTCAAATCCCAGCAACCACATGGTGGCTTACAACCAT  400

seq1  CTGTAACAAGATCTGATGCTCTCTTCTGGAATATCTGAGGACAGCTACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACAAGATCTGATGCTCTCTTCTGGAATATCTGAGGACAGCTACAA  450

seq1  TGTTCTTACATATAATAAATAAATCTTTAAAAATAAATAAATAAATAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTACATATAATAAATAAATCTTTAAAAATAAATAAATAAATAAAT  500

seq1  GTATTTGTGATCAACAGATATTTCAATCTTAAGAATATACAATGAATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGTGATCAACAGATATTTCAATCTTAAGAATATACAATGAATATA  550

seq1  CAATATTTTGAAATGTGAATAGCATATGTGTGCAAAATAAGTAATTAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTTTGAAATGTGAATAGCATATGTGTGCAAAATAAGTAATTAAGT  600

seq1  GGAGGGCAGGGAAAGAAGCAGCTTTGGGGGGCTAAAGAGATGGCTCAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGCAGGGAAAGAAGCAGCTTTGGGGGGCTAAAGAGATGGCTCAGTG  650

seq1  GTCAAGAGCCCTGACTGCTCTTCC  674
      ||||||||||||||||||||||||
seq2  GTCAAGAGCCCTGACTGCTCTTCC  674

seq1: chr11_87367289_87368138
seq2: B6Ng01-148B15.g_69_925 (reverse)

seq1  AGGGCT-ATACAGAG-AAACCCTGTCTCGAAAAACCAAAAAAAAAGAAAA  48
      |||||| |||||||| |||||||||||||||||| ||||||||||  |||
seq2  AGGGCTAATACAGAGAAAACCCTGTCTCGAAAAAACAAAAAAAAAAGAAA  50

seq1  AGGAGAGATCCAACTACAGTAAGTTGTCCTCTAACCTCC-TCCATATGCC  97
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGGAGAGATCCAACTACAGTAAGTTGTCCTCTAACCTCCTTCCATATGCC  100

seq1  CGTGTGCATATACACATTTTACATACACATAAATATAAAATACAACTTCT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGCATATACACATTTTACATACACATAAATATAAAATACAACTTCT  150

seq1  TAAGCATTTT-AAATTTAGCTTACATGGATACTGGGGAAACTATATATTG  196
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATTTTAAAATTTAGCTTACATGGATACTGGGGAAACTATATATTG  200

seq1  CAGAATTCAAACGGAGTTTAC-AAGT-AATGGAAAAGTTACAAATTCACC  244
      ||||||||||||||||||||| |||| |||||||||||||||||||||||
seq2  CAGAATTCAAACGGAGTTTACAAAGTAAATGGAAAAGTTACAAATTCACC  250

seq1  TTAACTTTAGAACTATTCT-AATGGAGTTCCAGGCTTCCAGTGTATCTTT  293
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTAACTTTAGAACTATTCTAAATGGAGTTCCAGGCTTCCAGTGTATCTTT  300

seq1  ACAGATGACCCCCCCCTTCTATGTTTACTTTACTTGGGGAGTTAGATGTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGACCCCCCCCTTCTATGTTTACTTTACTTGGGGAGTTAGATGTT  350

seq1  CACCCTTCCGAGTCATCTAGTGTCCCTGACATCTTTTCCCTAGTCCCTTC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTTCCGAGTCATCTAGTGTCCCTGACATCTTTTCCCTAGTCCCTTC  400

seq1  TGGTCCTTTCCCTGCCCTGGTTTCTGCTTTATGCCTCAGGATGCTTAGCC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTTTCCCTGCCCTGGTTTCTGCTTTATGCCTCAGGATGCTTAGCC  450

seq1  TAGTGGACTGTATCTCATTGACTTTCTGGAGTCTCTGGCAGAAGATCAGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGACTGTATCTCATTGACTTTCTGGAGTCTCTGGCAGAAGATCAGA  500

seq1  GGGCAAGAAAATTGTATTCACTTCCTTTCCTACCTCTTTGAACACCCTGC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGAAAATTGTATTCACTTCCTTTCCTACCTCTTTGAACACCCTGC  550

seq1  ATCTGGTAACCATGGTGTCCTTCACAGGCATCCTGCCTTTCCTAGCTCCA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTAACCATGGTGTCCTTCACAGGCATCCTGCCTTTCCTAGCTCCA  600

seq1  GTTCTCCCCACTAGGTCCTAGTAACTATCCTGCTGTCCCATCCCCACTGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCCCACTAGGTCCTAGTAACTATCCTGCTGTCCCATCCCCACTGT  650

seq1  TAGCCACTTTCCACTTAGGCTTTCCACCGCTGTAGCCAAAAGAAGCCGTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACTTTCCACTTAGGCTTTCCACCGCTGTAGCCAAAAGAAGCCGTC  700

seq1  TGTCCTTGTTTGTCCCTTAACTCTAATTATACCTTTGTGTATAGCCGCTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTGTTTGTCCCTTAACTCTAATTATACCTTTGTGTATAGCCGCTT  750

seq1  TGTTAAGGAGTCTTTATCTGTACCAGCGATGTGTACATTTTATTTCCTCC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGGAGTCTTTATCTGTACCAGCGATGTGTACATTTTATTTCCTCC  800

seq1  AGAACTCTGACTGGCACAGGGCCCAGAGGATGTGGACATTTAGCCAAGAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCTGACTGGCACAGGGCCCAGAGGATGTGGACATTTAGCCAAGAG  850

seq1  TGAATTC  850
      |||||||
seq2  TGAATTC  857