BAC Information

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BAC

Clone NameB6Ng01-149K22
Chromosome3 (Build37)11 (Build37)
Map Location 70,214,652 - 70,215,54951,436,171 - 51,437,177
singlet/doubletsingletsinglet
Overlap geneLOC625868
Upstream genePpm1l, LOC667309, B3galnt1, Rpl32-ps, Nmd3, LOC100041334, 1110032A04Rik, Gm414, LOC100041384
Downstream geneLOC670542, EG625901, EG667377
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149K22.bB6Ng01-149K22.g
ACCDH945953DH945954
length1,0851,009
definitionDH945953|Mus musculus domesticus DNA, BAC clone: B6Ng01-149K22, 5' end.DH945954|Mus musculus domesticus DNA, BAC clone: B6Ng01-149K22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(70,214,652 - 70,215,549)(51,436,171 - 51,437,177)
sequence
gaattctagcacagccagcctgtttaaaatttttttctaaaatctctttt
atgaaatataacatattcttaattcagaaatgttctaaaagatttgaaaa
gcaactctaagctaacttgtgggttgtttgggttttttgttgttgttgtt
tgttttgttttggtttggttttatatccttccaacttgcctatttgtttt
aaataattccatgacttttaaagctcattaagacaaaaaccttctaaggc
tgattttaaaatttcccagttattccaaataagatgttgccctgacctga
aggactaatacaacagggagctgcaaggacaaattgggatcaggagattt
gaaggaaggaggcaagacaaaaatcctgttcaagcccatttattcttggg
aaaatggagggcttataaaactgaaaaccacagacagtatttgttcaggt
ttacaggccaaactgatgctaagtaatacattaacatcaaaggaatgtcc
ccattgtaaaaggtccagaaagaagtgccttcattgtaaaaggaaggaat
gcccatgttgtaaaatgtcccaagtcaattactacggaatggaagcaaga
tagtggaagaagcaaatgagtctttagatgatgtccattgcccagggata
agatggaggctgagatttgcaggagctttccggacctcaacaggatggtc
ttctgtcctttctccactatctatagcagtgaatttgtgtgaagaaaacc
agctgttgacagcacaggatatccacatgtgaccctgtgattatggggtt
gctatggcagcaaaaggggaaataaaggagccctttattagttcatccaa
ctttcagcctctcactggggacctatgcgtatgttcttcaggatggcatt
agacaggcttttcttcgaaacaaaattccttattcaaaagttaaataggg
ccaatagaaaaggatttttaaatttaagagttatggagttaattttgtcc
atgaatggctttgacacccaggaatgaggaccctggtttgatgtccatga
accttcccatatatagtcggataaggttgtaagaa
gaattcttaggtctgggtggcttgtttttctttttgagatggcatctcag
ctaggactaaagtacatagcacatggctggcaggcttccttcctgtaaga
tggggatcgtctgtatgctaagaatatttgaacacgtgtaaagggtgtca
gagacttatataacagaggtgaatatttgaacatgtgtgaagggtgtcag
agactttatataacagaggtactgccctgcctacagggataccctcatag
gccatgtgggaatattcagtattggcttggaggaccatggcttgagagct
tagtgtacatgatggcaaacaactgaagtatttttaaatgtaatgtttac
caacgggacatggctgcgtgccaggttagggctgtgactcctgttcccag
cagctctcttctctcctgtgtaggacttgggtgcagccacaggctccaag
cgtcccacttgtgtgatcatggtgaagccccatgaagaatatcaggagac
ctacgacaagtgcctggaggaggtgcaggcactgcctacacctctgtgag
agacttgggctgcaacccagcccctttccaagagatctggctggctgcag
gcagctgcccaccctaacagcatctccccgatttcttgctgtgtgagtct
tcccaggcagctccagcagtgttggaggtggagcctgcatctctgccatc
tcctcctgagctttgatgaagacagttccaagaatgtgggatagaagtaa
atgctaaggcgaaaacgtggcaagtgtgtgggtgttcttgaagttggcag
gaggagcaaaagcagccttttcagcacagagcctcaagggtgtacctggc
aaatgttctgcactggcttctacagcccacccgtcttcatttctcactct
aggactgttgggtgaggagatgaggcatcaagcccaaaccccacttcaca
cacctccaagagtggatcgcatatttatccccacaagaaccctgcaatca
ttgggtaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_70214652_70215549
seq2: B6Ng01-149K22.b_216_1130 (reverse)

seq1  TTCTTACAACCTTACCCGACT-TTTATGTGA--GTTC-TGTGCATCTAAA  46
      |||||||||||||| |||||| | |||| ||  |||| ||  |||| |||
seq2  TTCTTACAACCTTATCCGACTATATATGGGAAGGTTCATGGACATC-AAA  49

seq1  CCCTGGTCCTCATTCTTGTGTGTC-AAGCACTCTATTGACAAAATTAACT  95
      ||  ||||||||||| || ||||| ||||  |  || |||||||||||||
seq2  CCAGGGTCCTCATTCCTGGGTGTCAAAGCCATTCATGGACAAAATTAACT  99

seq1  CCATAACATCTTAAATTTTTAAAATTCCTTTTCTATTGGGCCTTATTAAC  145
      ||||||| |||||||  ||||||| |||||||||||||| |||  |||||
seq2  CCATAAC-TCTTAAA--TTTAAAAATCCTTTTCTATTGGCCCTATTTAAC  146

seq1  TCTTGATTAGGGAATTTGTGTTCGA--GAAAGCCTGTCT-ATGGCATCCT  192
      | |||| || |||||||   |||||   ||||||||||| ||| ||||||
seq2  TTTTGAATAAGGAATTTTGTTTCGAAGAAAAGCCTGTCTAATGCCATCCT  196

seq1  GA--GACATACGCATAGGTCCCCAGTG-GAGGCTGGAAGTT-GATG-GCT  237
      ||   |||||||||||||||||||||| ||||||| ||||| ||||  ||
seq2  GAAGAACATACGCATAGGTCCCCAGTGAGAGGCTGAAAGTTGGATGAACT  246

seq1  -ATAAAGGGCTCCTTTATTTCCCCTTTTGCTGCC-TAGC-ACCCCAT-AT  283
       ||||||||||||||||||||||||||||||||| |||| ||||||| ||
seq2  AATAAAGGGCTCCTTTATTTCCCCTTTTGCTGCCATAGCAACCCCATAAT  296

seq1  CACAGGGTCACATGTGGATATCCTGTGCTGTCAACAGCTGGTTTTCTTCA  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGTCACATGTGGATATCCTGTGCTGTCAACAGCTGGTTTTCTTCA  346

seq1  CACAAATTCACTGCTATAGATAGTGGAGAAAGGACAG-AGACCATCCTGT  382
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CACAAATTCACTGCTATAGATAGTGGAGAAAGGACAGAAGACCATCCTGT  396

seq1  TGAGGTCCGG-AAGCTCCTGC-AATCTCAGCCTCCATCTTATCCCTGGGC  430
      |||||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  TGAGGTCCGGAAAGCTCCTGCAAATCTCAGCCTCCATCTTATCCCTGGGC  446

seq1  AATGGACATCATCT-AAGACTCATTTGCTTCTTCCACTATCTTGCTTCCA  479
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AATGGACATCATCTAAAGACTCATTTGCTTCTTCCACTATCTTGCTTCCA  496

seq1  TTCCGTAGTAATTGACTTGGGACATTTTACAACATGGGCATTCCTTCCTT  529
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGTAGTAATTGACTTGGGACATTTTACAACATGGGCATTCCTTCCTT  546

seq1  TTACAATGAAGGCACTTCTTTCTGGACCTTTTACAATGGGGACATTCCTT  579
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATGAAGGCACTTCTTTCTGGACCTTTTACAATGGGGACATTCCTT  596

seq1  TGATGTTAATGTATTACTTAGCATCAGTTTGGCCTGTAAACCTGAACAAA  629
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTAATGTATTACTTAGCATCAGTTTGGCCTGTAAACCTGAACAAA  646

seq1  TACTGTCTGTGGTTTTCAGTTTTATAAGCCCTCCATTTTCCCAAGAATAA  679
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCTGTGGTTTTCAGTTTTATAAGCCCTCCATTTTCCCAAGAATAA  696

seq1  ATGGGCTTGAACAGGATTTTTGTCTTGCCTCCTTCCTTCAAATCTCCTGA  729
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTTGAACAGGATTTTTGTCTTGCCTCCTTCCTTCAAATCTCCTGA  746

seq1  TCCCAATTTGTCCTTGCAGCTCCCTGTTGTATTAGTCCTTCAGGTCAGGG  779
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATTTGTCCTTGCAGCTCCCTGTTGTATTAGTCCTTCAGGTCAGGG  796

seq1  CAACATCTTATTTGGAATAACTGGGAAATTTTAAAATCAGCCTTAGAAGG  829
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCTTATTTGGAATAACTGGGAAATTTTAAAATCAGCCTTAGAAGG  846

seq1  TTTTTGTCTTAATGAGCTTTAAAAGTCATGGAATTATTTAAAACAAATAG  879
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTCTTAATGAGCTTTAAAAGTCATGGAATTATTTAAAACAAATAG  896

seq1  GCAAGTTGGAAGGATATAA  898
      |||||||||||||||||||
seq2  GCAAGTTGGAAGGATATAA  915

seq1: chr11_51436171_51437177
seq2: B6Ng01-149K22.g_67_1075

seq1  GAATTCTTAGGTCTGGGTGGCTTGTTTTTCTTTTTGAGATGGCATCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGTCTGGGTGGCTTGTTTTTCTTTTTGAGATGGCATCTCAG  50

seq1  CTAGGACTAAAGTACATAGCACATGGCTGGCAGGCTTCCTTCCTGTAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGACTAAAGTACATAGCACATGGCTGGCAGGCTTCCTTCCTGTAAGA  100

seq1  TGGGGATCGTCTGTATGCTAAGAATATTTGAACACGTGTAAAGGGTGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATCGTCTGTATGCTAAGAATATTTGAACACGTGTAAAGGGTGTCA  150

seq1  GAGACTTATATAACAGAGGTGAATATTTGAACATGTGTGAAGGGTGTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTATATAACAGAGGTGAATATTTGAACATGTGTGAAGGGTGTCAG  200

seq1  AGACTTTATATAACAGAGGTACTGCCCTGCCTACAGGGATACCCTCATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTATATAACAGAGGTACTGCCCTGCCTACAGGGATACCCTCATAG  250

seq1  GCCATGTGGGAATATTCAGTATTGGCTTGGAGGACCATGGCTTGAGAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTGGGAATATTCAGTATTGGCTTGGAGGACCATGGCTTGAGAGCT  300

seq1  TAGTGTACATGATGGCAAACAACTGAAGTATTTTTAAATGTAATGTTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTACATGATGGCAAACAACTGAAGTATTTTTAAATGTAATGTTTAC  350

seq1  CAACGGGACATGGCTGCGTGCCAGGTTAGGGCTGTGACTCCTGTTCCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGGGACATGGCTGCGTGCCAGGTTAGGGCTGTGACTCCTGTTCCCAG  400

seq1  CAGCTCTCTTCTCTCCTGTGTAGGACTTGGGTGCAGCCACAGGCTCCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTCTTCTCTCCTGTGTAGGACTTGGGTGCAGCCACAGGCTCCAAG  450

seq1  CGTCCCACTTGTGTGATCATGGTGAAGCCCCATGAAGAATATCAGGAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCCACTTGTGTGATCATGGTGAAGCCCCATGAAGAATATCAGGAGAC  500

seq1  CTACGACAAGTGCCTGGAGGAGGTGCAGGCACTGCCTACACCTCTGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGACAAGTGCCTGGAGGAGGTGCAGGCACTGCCTACACCTCTGTGAG  550

seq1  AGACTTGGGCTGCAACCCAGCCCCTTTCCAAGAGATCTGGCTGGCTGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGGGCTGCAACCCAGCCCCTTTCCAAGAGATCTGGCTGGCTGCAG  600

seq1  GCAGCTGCCCACCCTAACAGCATCTCCCCGATTTCTTGCTGTGTGAGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGCCCACCCTAACAGCATCTCCCCGATTTCTTGCTGTGTGAGTCT  650

seq1  TCCCAGGCAGCTCCAGCAGTGTTGGAGGTGGAGCCTGCATCTCTGCCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGCAGCTCCAGCAGTGTTGGAGGTGGAGCCTGCATCTCTGCCATC  700

seq1  TCCTCCTGAGCTTTGATGAAGACAGTTCCAAGAATGTGGGATAGAAGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGAGCTTTGATGAAGACAGTTCCAAGAATGTGGGATAGAAGTAA  750

seq1  ATGCTAAGGCGAAAACGTGGCAAGTGTGTGGGTGTTCTTGAAGTTGGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAAGGCGAAAACGTGGCAAGTGTGTGGGTGTTCTTGAAGTTGGCAG  800

seq1  GAGGAGCAAAAGCAGCC-TTTCAGCACAGAGCCTCAAGGGTGTACCTGGC  849
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAGGAGCAAAAGCAGCCTTTTCAGCACAGAGCCTCAAGGGTGTACCTGGC  850

seq1  AAATGTTCTGCACTGGC-TCTACAGCCCACCCGTCTTCATTTCCCACTCT  898
      ||||||||||||||||| ||||||||||||||||||||||||| ||||||
seq2  AAATGTTCTGCACTGGCTTCTACAGCCCACCCGTCTTCATTTCTCACTCT  900

seq1  AGGACAGTTGGGGTGAGGAGATGAGGCATCAAGGCCCAAACCCCACTTCA  948
      ||||| ||| |||||||||||||||||||||| |||||||||||||||||
seq2  AGGACTGTT-GGGTGAGGAGATGAGGCATCAA-GCCCAAACCCCACTTCA  948

seq1  CACACCTCCAAGAGTGATACGCATATATATACACACAAG-ACCATGCAAT  997
      ||||||||||||||||   ||||||| ||| | |||||| ||| ||||||
seq2  CACACCTCCAAGAGTGGATCGCATATTTATCCCCACAAGAACCCTGCAAT  998

seq1  CATT-GGTAAG  1007
      |||| ||||||
seq2  CATTGGGTAAG  1009