BAC Information

Click to search

BAC

Clone NameB6Ng01-149L14
Chromosome11 (Build37)11 (Build37)
Map Location 7,782,880 - 7,783,9747,659,822 - 7,660,786
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAdcy1, LOC100041347, Igfbp1, Igfbp3
Downstream geneLOC665380, Tns3, LOC638720, Pkd1l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149L14.bB6Ng01-149L14.g
ACCDH945985DH945986
length1,097976
definitionDH945985|Mus musculus domesticus DNA, BAC clone: B6Ng01-149L14, 5' end.DH945986|Mus musculus domesticus DNA, BAC clone: B6Ng01-149L14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(7,782,880 - 7,783,974)(7,659,822 - 7,660,786)
sequence
gaattcttatgttataaaacaataagatgtataggaaatggtagacagct
aattatcctgatgtaatcattccacagtgaatacatgtggaatatctcca
cacaacgtgctggtctgtgaatacatgccaatatgtgtcaattgaggcac
caagaaaagattgatctgtatacacacttgctaagccctgaagatcttta
aacatggtccttttcagtgatttcatccagatctattaattcacagaagc
agttattggataagatacagcccccaccatgacccctggcatttattttg
catatgtgaatttttcttggaatggataaccacattttcaaacatctttc
tcacacccttgctcttgtatagtagactaaattagcatgtagcaacaaat
actttttaatgcttagccatcagaacctctagttttgtgctgaggaaagg
aaaaaagagtgcttttaggtgagagcttgaaatagaaaatctccccacaa
cagtgagacttgaggtatattttcaatcattaagtaaatcaaaggcagag
gaagccacagaactgatggaaaaacagatgccactcatttcttccttccg
atattttctgggattttctcagataaaaactgaccacttatgaaatagct
taactttgacgttcctatggaagagtgtggtgatttgaatatgcttggcc
catgggatgtggcattattaagaggtgttgtcttgtcagaggaagtatgc
ctcacgctccacccagtgcagaggtttttttcctggttgcttttgaatca
agatgtagaactcttatctccttttccagcaccaagtcttcttctatgat
gccatgcttcctaccatgatgacatgaactgaacctctgaaactttaagc
cagctcaaatgaaatgtttttccttttataattgccttggtcatggtgtc
tcttcactacaatggaatccctaattaatacatataagctaccagcccca
gatgcattgctctgaggtgagagaaccttgaaactgtgatttcaatttta
atcctccagaagtggttcttatggaaccctgaagcctcattctaggg

gaattcactacatttgtcttgaactttagccctttcctgtctcccattct
ccacattccttttattgaagttgaacagcatcttcttagtttgctaattg
attgtctagactgttccttcatctgaacactgaggtttccacaatgaaca
atttctcttttgattttctaagacttcaaaaaatgttttccaatacaaaa
gtctgtctcccatagggtaatatattattttttaaaaaggtttgtaattt
gattaaaatcttaataactgagaaatggattgcactgtaaaaaagaaatg
tttgctgctgctcatgaggatttgagtttgatttccagtgtccatgttgc
cagctcacagctgcctataacatcctgtgtccactattggcctccttggg
cacctgcacatgtgttgcatatagatacacacacacaaagattaaaagct
ttaaaactctgaactattgaaaatatttcttcagaatagttcagttatca
tcagctgtatttgttatgcttgctttactatttattggtgttcctgagtg
tgttctgagaatttgtattttgataagaagttctagtattcacttgagaa
gaatggcaagatttttccaggtacttatgtcattccctctgattttccct
ggtctaagattggatgtgttgatgggtgcttcaggttagcgctttattat
ttagggaatataaatttggacccagttctactcctttccaattagagcct
ttaaaaggaatcgtgacgagctgaagttttcctctatttattaagttgtt
aggttgagtctggtttcatggaagccaatcacttggaagctcagctctca
ttggccccacaggtagatattttgacacctcagttcctctgtgggttagc
taaggtcatctgggattttgatggttctacttgaattttctcttagttaa
gcaatcgccatcctttccttttatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_7782880_7783974
seq2: B6Ng01-149L14.b_48_1144 (reverse)

seq1  CCCT-GAATGAGGCTTCAGGG-TCCATTAGGACCAC-TCTGGAGGATTAA  47
      |||| |||||||||||||||| ||||| || ||||| ||||||||||| |
seq2  CCCTAGAATGAGGCTTCAGGGTTCCATAAGAACCACTTCTGGAGGATT-A  49

seq1  AAATGGAAATCACAGTTTCAAGGTTCTCCTCACCTCAGAGCCATGGCATC  97
      |||| |||||||||||||||||||||| ||||||||||||| || |||||
seq2  AAATTGAAATCACAGTTTCAAGGTTCT-CTCACCTCAGAGCAAT-GCATC  97

seq1  TTGGGCTGGTAGCTTATATGTATTAATTAGGG-TTCCATTGTAGTGAAGA  146
      | |||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGGGGCTGGTAGCTTATATGTATTAATTAGGGATTCCATTGTAGTGAAGA  147

seq1  GACACCATGACCAAGGCAATTATAAA--GGAAAACATTTCATTTGAGCTG  194
      ||||||||||||||||||||||||||  | ||||||||||||||||||||
seq2  GACACCATGACCAAGGCAATTATAAAAGGAAAAACATTTCATTTGAGCTG  197

seq1  GCTTATAGTTTCAGAGGTTCAGTTCATTGTCATCATGGTAGGAAGCATGG  244
      ||||| |||||||||||||||||||| |||||||||||||||||||||||
seq2  GCTTAAAGTTTCAGAGGTTCAGTTCA-TGTCATCATGGTAGGAAGCATGG  246

seq1  CATCATAGAAGAAGACTTGGTGCTGGAAAAGGAGATAAGAGTTCTACATC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAGAAGAAGACTTGGTGCTGGAAAAGGAGATAAGAGTTCTACATC  296

seq1  TTGATTCAAAAGCAACCAGGAAAAAAACCTCTGCACTGGGTGGAGCCTGA  344
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTGATTCAAAAGCAACCAGGAAAAAAACCTCTGCACTGGGTGGAGCGTGA  346

seq1  GGCATACTTCCTCTGACAAGACAACACCTCTTAATAATGCCACATCCCAT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATACTTCCTCTGACAAGACAACACCTCTTAATAATGCCACATCCCAT  396

seq1  GGGCCAAGCATATTCAAATCACCACACTCTTCCATAGGAACGTCAAAGTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAAGCATATTCAAATCACCACACTCTTCCATAGGAACGTCAAAGTT  446

seq1  AAGCTATTTCATAAGTGGTCAGTTTTTATCTGAGAAAATCCCAGAAAATA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATTTCATAAGTGGTCAGTTTTTATCTGAGAAAATCCCAGAAAATA  496

seq1  TCGGAAGGAAGAAATGAGTGGCATCTGTTTTTCCATCAGTTCTGTGGCTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAAGGAAGAAATGAGTGGCATCTGTTTTTCCATCAGTTCTGTGGCTT  546

seq1  CCTCTGCCTTTGATTTACTTAATGATTGAAAATATACCTCAAGTCTCACT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTTTGATTTACTTAATGATTGAAAATATACCTCAAGTCTCACT  596

seq1  GTTGTGGGGAGATTTTCTATTTCAAGCTCTCACCTAAAAGCACTCTTTTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGGGGAGATTTTCTATTTCAAGCTCTCACCTAAAAGCACTCTTTTT  646

seq1  TCCTTTCCTCAGCACAAAACTAGAGGTTCTGATGGCTAAGCATTAAAAAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCTCAGCACAAAACTAGAGGTTCTGATGGCTAAGCATTAAAAAG  696

seq1  TATTTGTTGCTACATGCTAATTTAGTCTACTATACAAGAGCAAGGGTGTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTTGCTACATGCTAATTTAGTCTACTATACAAGAGCAAGGGTGTG  746

seq1  AGAAAGATGTTTGAAAATGTGGTTATCCATTCCAAGAAAAATTCACATAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGATGTTTGAAAATGTGGTTATCCATTCCAAGAAAAATTCACATAT  796

seq1  GCAAAATAAATGCCAGGGGTCATGGTGGGGGCTGTATCTTATCCAATAAC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATAAATGCCAGGGGTCATGGTGGGGGCTGTATCTTATCCAATAAC  846

seq1  TGCTTCTGTGAATTAATAGATCTGGATGAAATCACTGAAAAGGACCATGT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTGTGAATTAATAGATCTGGATGAAATCACTGAAAAGGACCATGT  896

seq1  TTAAAGATCTTCAGGGCTTAGCAAGTGTGTATACAGATCAATCTTTTCTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATCTTCAGGGCTTAGCAAGTGTGTATACAGATCAATCTTTTCTT  946

seq1  GGTGCCTCAATTGACACATATTGGCATGTATTCACAGACCAGCACGTTGT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCTCAATTGACACATATTGGCATGTATTCACAGACCAGCACGTTGT  996

seq1  GTGGAGATATTCCACATGTATTCACTGTGGAATGATTACATCAGGATAAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGATATTCCACATGTATTCACTGTGGAATGATTACATCAGGATAAT  1046

seq1  TAGCTGTCTACCATTTCCTATACATCTTATTGTTTTATAACATAAGAATT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTCTACCATTTCCTATACATCTTATTGTTTTATAACATAAGAATT  1096

seq1  C  1095
      |
seq2  C  1097


seq1: chr11_7659822_7660786
seq2: B6Ng01-149L14.g_70_1045 (reverse)

seq1  ACATAAA--GAAA-GATGGCAATTGCTTAACTAAGAG-AAATTACAGTAG  46
      |||||||  |||| |||||| |||||||||||||||| |||||  |||||
seq2  ACATAAAAGGAAAGGATGGCGATTGCTTAACTAAGAGAAAATTCAAGTAG  50

seq1  AA-CATCAAAAT-CCAGATGAACCTTAGCTAACCCACAGAGGAACTGAGG  94
      || ||||||||| ||||||| |||||||||||||||||||||||||||||
seq2  AACCATCAAAATCCCAGATG-ACCTTAGCTAACCCACAGAGGAACTGAGG  99

seq1  TGTC-AAATATCTACCTGTGGGGCCAATGAGAGCTGAGC-TCCAAGTGAT  142
      |||| |||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGTCAAAATATCTACCTGTGGGGCCAATGAGAGCTGAGCTTCCAAGTGAT  149

seq1  TGGCTTCCATG-AACCAGACTCAACCTAACAACTTAATAAATAGAGG-AA  190
      ||||||||||| ||||||||||||||||||||||||||||||||||| ||
seq2  TGGCTTCCATGAAACCAGACTCAACCTAACAACTTAATAAATAGAGGAAA  199

seq1  ACTTCAGCTCGTCACGATTCCTTTT-AAGGCTCTAATTGGAAAGGAGTAG  239
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACTTCAGCTCGTCACGATTCCTTTTAAAGGCTCTAATTGGAAAGGAGTAG  249

seq1  AACTGGGTCCAAATTTATATTCCCTAAATAATAAAGCGCTAACCTGAAGC  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGTCCAAATTTATATTCCCTAAATAATAAAGCGCTAACCTGAAGC  299

seq1  ACCCATCAACACATCCAATCTTAGACCAGGGAAAATCAGAGGGAATGACA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATCAACACATCCAATCTTAGACCAGGGAAAATCAGAGGGAATGACA  349

seq1  TAAGTACCTGG-AAAATCTTGCCATTCTTCTCAAGTGAATACTAGAACTT  388
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAAGTACCTGGAAAAATCTTGCCATTCTTCTCAAGTGAATACTAGAACTT  399

seq1  CTTATCAAAATACAAATTCTCAGAACACACTCAGGAACACCAATAAATAG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCAAAATACAAATTCTCAGAACACACTCAGGAACACCAATAAATAG  449

seq1  TAAAGCAAGCATAACAAATACAGCTGATGATAACTGAACTATTCTGAAGA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAAGCATAACAAATACAGCTGATGATAACTGAACTATTCTGAAGA  499

seq1  AATATTTTCAATAGTTCAGAGTTTTAAAGCTTTTAATCTTTGTGTGTGTG  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTCAATAGTTCAGAGTTTTAAAGCTTTTAATCTTTGTGTGTGTG  549

seq1  TATCTATATGCAACACATGTGCAGGTGCCCAAGGAGGCCAATAGTGGACA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATATGCAACACATGTGCAGGTGCCCAAGGAGGCCAATAGTGGACA  599

seq1  CAGGATGTTATAGGCAGCTGTGAGCTGGCAACATGGACACTGGAAATCAA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGTTATAGGCAGCTGTGAGCTGGCAACATGGACACTGGAAATCAA  649

seq1  ACTCAAATCCTCATGAGCAGCAGCAAACATTTCTTTTTTACAGTGCAATC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAATCCTCATGAGCAGCAGCAAACATTTCTTTTTTACAGTGCAATC  699

seq1  CATTTCTCAGTTATTAAGATTTTAATCAAATTACAAACCTTTTTAAAAAA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTCAGTTATTAAGATTTTAATCAAATTACAAACCTTTTTAAAAAA  749

seq1  TAATATATTACCCTATGGGAGACAGACTTTTGTATTGGAAAACATTTTTT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATATTACCCTATGGGAGACAGACTTTTGTATTGGAAAACATTTTTT  799

seq1  GAAGTCTTAGAAAATCAAAAGAGAAATTGTTCATTGTGGAAACCTCAGTG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTTAGAAAATCAAAAGAGAAATTGTTCATTGTGGAAACCTCAGTG  849

seq1  TTCAGATGAAGGAACAGTCTAGACAATCAATTAGCAAACTAAGAAGATGC  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATGAAGGAACAGTCTAGACAATCAATTAGCAAACTAAGAAGATGC  899

seq1  TGTTCAACTTCAATAAAAGGAATGTGGAGAATGGGAGACAGGAAAGGGCT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAACTTCAATAAAAGGAATGTGGAGAATGGGAGACAGGAAAGGGCT  949

seq1  AAAGTTCAAGACAAATGTAGTGAATTC  965
      |||||||||||||||||||||||||||
seq2  AAAGTTCAAGACAAATGTAGTGAATTC  976


| Home | SequenceCutter | Blast | Download |