BAC Information

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BAC

Clone NameB6Ng01-149M10
Chromosome11 (Build37)
Map Location 49,110,002 - 49,110,881
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC192895, Hn1l-ps2, LOC667163, LOC432554, Gnb2l1, Trim41, LOC100039945, Trim7, Irgm, EG432555, OTTMUSG00000005523, Psme2b-ps, LOC667214, Tgtp, LOC667219, 9930111J21Rik, Olfr56, LOC100039796, Ifi47, Olfr1396, Olfr1395, Olfr1394, Btnl9, Zfp62, Mgat1, Olfr1393, Olfr1392
Downstream geneOlfr10, Olfr1391, Olfr1390, LOC667286, Olfr1389, Olfr1388, Olfr1387, Olfr1386, Olfr1385, Olfr1549-ps1, Olfr1384, Olfr1383, Olfr1382, GA_x5J8B7TT7LR-4113-3651, Olfr1381, Olfr1380, Flt4, LOC100040032, Scgb3a1, Cnot6, LOC666899, LOC100040073, Gfpt2, Mapk9, Rasgef1c, Rnf130, LOC380696, Tbc1d9b, 3010026O09Rik, Sqstm1, Mgat4b, Ltc4s, Maml1, Canx
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149M10.bB6Ng01-149M10.g
ACCDH946024DH946025
length1,082880
definitionDH946024|Mus musculus domesticus DNA, BAC clone: B6Ng01-149M10, 5' end.DH946025|Mus musculus domesticus DNA, BAC clone: B6Ng01-149M10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggccgagaagcacctgaaaaatat
gttcagcatccttaatcatcagggaaatgcaagtcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggtgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagtttctacaaccactctggaaatcagtctggtggtttctc
aaaaaattggacatagtacaactggaggatcctgcaatacctctcctggg
catatatccagaagatgtcctaactggtaagaaagacacatgctccacta
tgttcatagcagccttatttatgatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagtgaggtaactcagtcacaa
aagaactcacatgatatgtactcactgataagtgaatattagcccagaaa
cgtagaatacccaagatataagatacaatttgcgaaacacatgaagctca
ggaagaacaaagaccaaggtgtggatactttgccccttcttggaattggg
agcaaggcacccatggaaggagctacagagacagagtttggagctgagac
aaaaggatagaccatctagagactgccatttccggggatccatcccatat
cagtcttcaaatgctgacaccattgcatacactagcaagattttgctgaa
gcaccctgatttagctgtctctttgtgagactattcctgggcctagcaaa
cacagagtggatgctcacagtcagccccatgaggagctagagaattacca
gggagcttgggagggatctgcacctatatgtggtaaaatatatgaactac
ccccccccccccgaccatgtcttacctgctatgatcaaagatggctgtcg
cgcatcctggaagagagggctttgggtctgaa
gaattctccctccctgagcagttgaagctaatagtagttcgtcaataagt
acacacacacacacacacacacacacacacacacacaaacacacacacac
acaaacacagacacacacaaacacacacatatacacaaacacacacacaa
acacacacagacacacaaacacacacatatacacaaacacacacacaaac
acacacacatatacacaaacacacacacaccacatacattgttagaaggt
aatttgatactcacatcatattatttaagaaaatgatagcagcatctttt
ctctcttttttctatccaagcttatttaatgagtttatgtaaatcttttc
tttggcagatgtgtgtctatccattctttttgtttttccttttttaaaat
tggatattttctttatttacatttcaaatgttatcccctttcacactttc
ccctctgaaaataccctgtcttctcccccctccccctgttccccaacaca
cccactcctgcttcatagcagagacattcccctatactggggcatagaac
cttcacaggaccaagggcctttaattgatgaccgactaggccatcctctg
ctacatatgcaactagagccacgagtcccaccacatattttctttgattg
gttgtttagtcccagggagctctggggttactggttagttcatattgttg
ttcttctttaggggctgtaaaacgcttcagtttcttaagtacttctctag
ctacttcattggggattctgggctctgtctaatggatgaatgtgagcatc
cacttctgtattagtcaggcaccggcagagcctctcaggagacagctata
tcaggctcctgtcaactagctcttgttggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_49110002_49110881
seq2: B6Ng01-149M10.g_69_948

seq1  GAATTCTCCCTCCCTGAGCAGTTGAAGCTAATAGTAGTTCGTCAATAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTCCCTGAGCAGTTGAAGCTAATAGTAGTTCGTCAATAAGT  50

seq1  ACACACACACACACACACACACACACACACACACACAAACACACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACAAACACACACACAC  100

seq1  ACAAACACAGACACACACAAACACACACATATACACAAACACACACACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACAGACACACACAAACACACACATATACACAAACACACACACAA  150

seq1  ACACACACAGACACACAAACACACACATATACACAAACACACACACAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACAGACACACAAACACACACATATACACAAACACACACACAAAC  200

seq1  ACACACACATATACACAAACACACACACACCACATACATTGTTAGAAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACATATACACAAACACACACACACCACATACATTGTTAGAAGGT  250

seq1  AATTTGATACTCACATCATATTATTTAAGAAAATGATAGCAGCATCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGATACTCACATCATATTATTTAAGAAAATGATAGCAGCATCTTTT  300

seq1  CTCTCTTTTTTCTATCCAAGCTTATTTAATGAGTTTATGTAAATCTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTTTTCTATCCAAGCTTATTTAATGAGTTTATGTAAATCTTTTC  350

seq1  TTTGGCAGATGTGTGTCTATCCATTCTTTTTGTTTTTCCTTTTTTAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCAGATGTGTGTCTATCCATTCTTTTTGTTTTTCCTTTTTTAAAAT  400

seq1  TGGATATTTTCTTTATTTACATTTCAAATGTTATCCCCTTTCACACTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATTTTCTTTATTTACATTTCAAATGTTATCCCCTTTCACACTTTC  450

seq1  CCCTCTGAAAATACCCTGTCTTCTCCCCCCTTCCCCTGTTCCCCAACACA  500
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCCTCTGAAAATACCCTGTCTTCTCCCCCCTCCCCCTGTTCCCCAACACA  500

seq1  CCCACTCCTGCTTCATAGCAGAGACATTCCCCTATACTGGGGCATAGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCTGCTTCATAGCAGAGACATTCCCCTATACTGGGGCATAGAAC  550

seq1  CTTCACAGGACCAAGGGCCTTTAATTGATGACCGACTAGGCCATCCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAGGACCAAGGGCCTTTAATTGATGACCGACTAGGCCATCCTCTG  600

seq1  CTACATATGCAACTAGAGCCACGAGTCCCACCACATATTTTCTTTGATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATATGCAACTAGAGCCACGAGTCCCACCACATATTTTCTTTGATTG  650

seq1  GTTGTTTAGTCCCAGGGAGCTCTGGGGTTACTGGTTAGTTCATATTGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTAGTCCCAGGGAGCTCTGGGGTTACTGGTTAGTTCATATTGTTG  700

seq1  TTCTTCTTAAGGGGCTGTAAAACGCTTCAGTTTCTTAAGTACTTCTCTAG  750
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTTAGGGGCTGTAAAACGCTTCAGTTTCTTAAGTACTTCTCTAG  750

seq1  CTACTTCATTGGGGATTCTGGGCTCTGTCTAATGGATGAATGTGAGCATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCATTGGGGATTCTGGGCTCTGTCTAATGGATGAATGTGAGCATC  800

seq1  CACTTCTGTATTAGTCAGGCACCGGCAGAGCCTCTCAGGAGACAGCTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGTATTAGTCAGGCACCGGCAGAGCCTCTCAGGAGACAGCTATA  850

seq1  TCAGGCTCCTGTCAACTAGCTCTTGTTGGC  880
      ||||||||||||||||||||||||||||||
seq2  TCAGGCTCCTGTCAACTAGCTCTTGTTGGC  880