BAC Information

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BAC

Clone NameB6Ng01-150C05
Chromosome11 (Build37)
Map Location 68,232,026 - 68,232,881
singlet/doubletsinglet
Overlap genenone
Upstream geneGas7, Rcvrn, Glp2r, LOC544792, Dhrs7c, LOC100041899, Usp43, Wdr16, Stx8, Ntn1
Downstream genePik3r5, BB220380, BC024997, Ccdc42, Myh10, Ndel1, 9930039A11Rik, Rpl26, Odf4, Arhgef15, Slc25a35, 2400006H24Rik, Pfas, 1500010J02Rik, Aurkb, 2310047M10Rik, Tmem107, Vamp2, Per1, Hes7, Aloxe3, Alox12b, Alox8, Gucy2e, Cntrob, Trappc1, Kcnab3, A030009H04Rik, Chd3, Cyb5d1, Lsmd1, Tmem88, Jmjd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150C05.bB6Ng01-150C05.g
ACCDH946295DH946296
length855251
definitionDH946295|Mus musculus domesticus DNA, BAC clone: B6Ng01-150C05, 5' end.DH946296|Mus musculus domesticus DNA, BAC clone: B6Ng01-150C05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcttttttctgtttttggagacaggatttcactatgtagccat
ctggaactcccagtgtaccctatgtagatcaggctagactcaaaggcata
ggcatctgtttactgtctcacagaagtcatgcccacgtgatttttcttat
gaagaataaataattcagagattgtttattgaaaccaccaataatgatga
ttaacataattttgccatctagagagctattaattattgttttatatgtg
ttctagatgaggaaaattttataaaaaaatgtacatttattttatccatt
ggtgaattatgagtgtattgctgcatagcattatatatctttgtgtgtgt
gtcacttgagaggagagagagagagagagagagagagagagagagagaga
atgaattagttatagtttctattgttgcagtgaacaccatgataccatga
tgatcagtttggggagggaagggtttattcagcttatatttccacattgc
tgttcatcatcaaaggaaatcaggacaggaactcaagcaggccaggaatc
tggaaacaggagctgatgcagaggccttggaaaggtgctgcttactggct
tgctcaaccttctttcttcttttttttttcaattcatttttttacactcc
atattccatcccccaccctccccatccaccctctgactgctccacgtccc
acaccttctccctaccccacctgacctctaaactccctgaggcctccagt
cttttgagggttaggtgcatcatctctgaatggacacagacccggagccc
tctactgtatgtgtgttggggggcctctatcaactggtgtatgctgtctg
ttggg
ccatggagggacccatggctctaactgcatatgtagcagaggattacctt
atctggtatcaatgagaggggagccccttggtcctgtgcaggcttgatga
tctagtgtaggggaatgctagggcaggagtgggtaggtgggtggagggag
caccctcatagaggcagggctagggggaagggaataagggatttaactgg
gaaggagggtaacatttgaaatgtgagtaaataaaataaccaataaaata
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_68232026_68232881
seq2: B6Ng01-150C05.b_46_900

seq1  GAATTCTTCTTTTTTCTGTTTTTGGAGACAGGATTTCACTATGTAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTTTTTCTGTTTTTGGAGACAGGATTTCACTATGTAGCCAT  50

seq1  CTGGAACTCCCAGTGTACCCTATGTAGATCAGGCTAGACTCAAAGGCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTCCCAGTGTACCCTATGTAGATCAGGCTAGACTCAAAGGCATA  100

seq1  GGCATCTGTTTACTGTCTCACAGAAGTCATGCCCACGTGATTTTTCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTGTTTACTGTCTCACAGAAGTCATGCCCACGTGATTTTTCTTAT  150

seq1  GAAGAATAAATAATTCAGAGATTGTTTATTGAAACCACCAATAATGATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATAAATAATTCAGAGATTGTTTATTGAAACCACCAATAATGATGA  200

seq1  TTAACATAATTTTGCCATCTAGAGAGCTATTAATTATTGTTTTATATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATAATTTTGCCATCTAGAGAGCTATTAATTATTGTTTTATATGTG  250

seq1  TTCTAGATGAGGAAAATTTTATAAAAAAATGTACATTTATTTTATCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGATGAGGAAAATTTTATAAAAAAATGTACATTTATTTTATCCATT  300

seq1  GGTGAATTATGAGTGTATTGCTGCATAGCATTATATATCTTTGTGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATTATGAGTGTATTGCTGCATAGCATTATATATCTTTGTGTGTGT  350

seq1  GTCACTTGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTTGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  400

seq1  ATGAATTAGTTATAGTTTCTATTGTTGCAGTGAACACCATGATACCATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTAGTTATAGTTTCTATTGTTGCAGTGAACACCATGATACCATGA  450

seq1  TGATCAGTTTGGGGAGGGAAGGGTTTATTCAGCTTATATTTCCACATTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGTTTGGGGAGGGAAGGGTTTATTCAGCTTATATTTCCACATTGC  500

seq1  TGTTCATCATCAAAGGAAATCAGGACAGGAACTCAAGCAGGCCAGGAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATCATCAAAGGAAATCAGGACAGGAACTCAAGCAGGCCAGGAATC  550

seq1  TGGAAACAGGAGCTGATGCAGAGGCCTTGGAAAGGTGCTGCTTACTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACAGGAGCTGATGCAGAGGCCTTGGAAAGGTGCTGCTTACTGGCT  600

seq1  TGCTCAACCTTCTTTCTTCTTTTTTTTTTCAATTCATTTTTTTACACTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAACCTTCTTTCTTCTTTTTTTTTTCAATTCATTTTTTTACACTCC  650

seq1  ATATTCCATCCCCCACCCTCCCCATCCACCCTCTGACTGCTCCACGTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCATCCCCCACCCTCCCCATCCACCCTCTGACTGCTCCACGTCCC  700

seq1  ACACCTTCTCCCTACCCCACCTGACCTCTAAACTCCCTGAGGCCTCCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTCTCCCTACCCCACCTGACCTCTAAACTCCCTGAGGCCTCCAGT  750

seq1  CTTTTGAGGGTTAGGTGCATCATCTCTGAATGGACACAGACCCGGAAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTTTTGAGGGTTAGGTGCATCATCTCTGAATGGACACAGACCCGG-AGCC  799

seq1  CTCTACTGTATGTGTGTT-GGGGGCCTCATATCAACTGGTGTATGCTGTC  849
      |||||||||||||||||| ||||||||| |||||||||||||||||||||
seq2  CTCTACTGTATGTGTGTTGGGGGGCCTC-TATCAACTGGTGTATGCTGTC  848

seq1  TGTTTGG  856
      |||| ||
seq2  TGTTGGG  855