BAC Information

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BAC

Clone NameB6Ng01-150M21
Chromosome11 (Build37)
Map Location 12,255,624 - 12,416,521
singlet/doubletdoublet
Overlap geneCobl
Upstream geneZpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc, Grb10
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150M21.bB6Ng01-150M21.g
ACCDH946788DH946789
length1,031702
definitionDH946788|Mus musculus domesticus DNA, BAC clone: B6Ng01-150M21, 5' end.DH946789|Mus musculus domesticus DNA, BAC clone: B6Ng01-150M21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,415,479 - 12,416,521)(12,255,624 - 12,256,332)
sequence
gaattcagaaagggctacctttccagagaagtcatggacatttagttcaa
caccagggtggtcttttgaagcagatctatcctagccgggaggtgttgca
acatgaaggatgaggccagcctggcatgggttaaacttatgacaagggaa
caaatgcaagctggtgccgttggttgtgtgatagaactgacctcaataga
aatggaaagtttagccggtcgtggtggcgcacgcctttaatcccagcact
tggaaggcagaggcaggtggatttctgagtttgaggccagccagatctac
agagtgagttccaggacagccaaggctgcacagagaaaccctgtctcaaa
acaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaagaagaaag
aaagaaagaaatggaaagcttgatcaaaaccaattaccaaagaagaggca
tgtgtaaaatgcttctttataataaacaccatattcagaaacttcctttt
cttggagaaagagagagagaataaagaaggaaaagaatgacctgtgtgct
ttaagtagacaaggatacacatagacacatagaaaacccacccgcatcta
ggcctttcctgctgaagaaataggtcaacaaaagaagggaactaagtttc
aaatatacagttggccaagtatatataattctagtgagtataacctctgt
ctgtggtagagttcatagcaatttgcatatgccctttctcagttgcctta
ctattactatctcagttcaaggtcttactcttagcatattaagtacagcc
tacgacagatttgatcaaggacaatgatctgcattaaatgaactcacaga
gcttcgtgtagaaactagactggctgggctgtcattgtgatgagcagcat
catcaggaaatggagtttgtagtgagatctttgttcatacatagcatcat
aagtgcattagaaagacgagtcagatagtaaactgaagttatagaaaaca
gttcatgatgttgagaaagatggcttaataa
gaattctgggagctttgaaagatgctgtaggagtggacatccatgtcaca
ggatacctgatgcaaggtcccaaacattagagatgaactcactccagcac
tgcagaaaagctggggttagacactgccagtgaacacacaactgccctac
ttgatctgccttggctgcttagcctagggagaaagtagacaagagagctg
gcaggcatacaacccaacatcagacatcttcaggaagaaataactcattg
tattacgtctgtgcacagcacattggcccagcgcctaccattctcagggt
gcaaaatgaaaataaatccagaggattagaacaagatagtgagcagtttg
agatagcataggtgctgagcagtacaaagattctacaattctctgaaaag
aagccatagcataggaagcctgtctccacacagatctagatcaaggcgca
agcaaatgtgccccggaagtttgcaggagcaccataagaagagagttgaa
gaggtctgcaactatagtggaacaacaatatgaactaaccagtaccccca
gagctcgtgtctctagctgcatatgtcgcaaagatggcttagttggccat
cactggtaagagagcccttggtaatgcaaactttatatgccccagtacag
gggaatgcaaggccaacaagcaagaatgggtggtagggaacaggccaggg
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12415479_12416521
seq2: B6Ng01-150M21.b_45_1075 (reverse)

seq1  TTATTAAG-CATCTTTCTCAACATTCATTGGAACTGTTTTCTTAATAAAC  49
      |||||||| |||||||||||||| ||||  ||||||||||||  || |||
seq2  TTATTAAGCCATCTTTCTCAACA-TCAT--GAACTGTTTTCT--AT-AAC  44

seq1  TTCAGTTTTACCTTATTCTGACTCGTCTTTTCTAATGCAACTATGATGCT  99
      ||||| |||||  || ||||||||||| |||||||||||  |||||||||
seq2  TTCAG-TTTAC--TA-TCTGACTCGTC-TTTCTAATGCACTTATGATGCT  89

seq1  ATGTATGAACAAAGATCTCACTACAAACTCCATTTCCCTGATGATGCCTG  149
      ||||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  ATGTATGAACAAAGATCTCACTACAAACTCCATTT-CCTGATGATG-CTG  137

seq1  CTCATCACAATGACAGCCCAGCCAGTCTAGTTTCTACACGAAGCTCTGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCACAATGACAGCCCAGCCAGTCTAGTTTCTACACGAAGCTCTGTG  187

seq1  AGTTCATTTAATGCAGATCATTGTCCTTGATCAAATCTGTCGTAGGCTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATTTAATGCAGATCATTGTCCTTGATCAAATCTGTCGTAGGCTGT  237

seq1  ACTTAATATGCTAAGAGTAAGACCTTGAACTGAGATAGTAATAGTAAGGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATATGCTAAGAGTAAGACCTTGAACTGAGATAGTAATAGTAAGGC  287

seq1  AACTGAGAAAGGGCATATGCAAATTGCTATGAACTCTACCACAGACAGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGAAAGGGCATATGCAAATTGCTATGAACTCTACCACAGACAGAG  337

seq1  GTTATACTCACTAGAATTATATATACTTGGCCAACTGTATATTTGAAACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATACTCACTAGAATTATATATACTTGGCCAACTGTATATTTGAAACT  387

seq1  TAGTTCCCTTCTTTTGTTGACCTATTTCTTCAGCAGGAAAGGCCTAGATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCCCTTCTTTTGTTGACCTATTTCTTCAGCAGGAAAGGCCTAGATG  437

seq1  CGGGTGGGTTTTCTATGTGTCTATGTGTATCCTTGTCTACTTAAAGCACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTGGGTTTTCTATGTGTCTATGTGTATCCTTGTCTACTTAAAGCACA  487

seq1  CAGGTCATTCTTTTCCTTCTTTATTCTCTCTCTCTTTCTCCAAGAAAAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCATTCTTTTCCTTCTTTATTCTCTCTCTCTTTCTCCAAGAAAAGG  537

seq1  AAGTTTCTGAATATGGTGTTTATTATAAAGAAGCATTTTACACATGCCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCTGAATATGGTGTTTATTATAAAGAAGCATTTTACACATGCCTC  587

seq1  TTCTTTGGTAATTGGTTTTGATCAAGCTTTCCATTTCTTTCTTTCTTTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGGTAATTGGTTTTGATCAAGCTTTCCATTTCTTTCTTTCTTTCT  637

seq1  TCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGTTTTGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGTTTTGAG  687

seq1  ACAGGGTTTCTCTGTGCAGCCTTGGCTGTCCTGGAACTCACTCTGTAGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTTTCTCTGTGCAGCCTTGGCTGTCCTGGAACTCACTCTGTAGAT  737

seq1  CTGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTTCCAAGTGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTTCCAAGTGCT  787

seq1  GGGATTAAAGGCGTGCGCCACCACGACCGGCTAAACTTTCCATTTCTATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTAAAGGCGTGCGCCACCACGACCGGCTAAACTTTCCATTTCTATT  837

seq1  GAGGTCAGTTCTATCACACAACCAACGGCACCAGCTTGCATTTGTTCCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAGTTCTATCACACAACCAACGGCACCAGCTTGCATTTGTTCCCT  887

seq1  TGTCATAAGTTTAACCCATGCCAGGCTGGCCTCATCCTTCATGTTGCAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATAAGTTTAACCCATGCCAGGCTGGCCTCATCCTTCATGTTGCAAC  937

seq1  ACCTCCCGGCTAGGATAGATCTGCTTCAAAAGACCACCCTGGTGTTGAAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCCGGCTAGGATAGATCTGCTTCAAAAGACCACCCTGGTGTTGAAC  987

seq1  TAAATGTCCATGACTTCTCTGGAAAGGTAGCCCTTTCTGAATTC  1043
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTCCATGACTTCTCTGGAAAGGTAGCCCTTTCTGAATTC  1031

seq1: chr11_12255624_12256332
seq2: B6Ng01-150M21.g_68_769

seq1  GAATTCTGGGAGCTTTGAAAGATGCTGTAGGAGTGGACATCCATGTCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAGCTTTGAAAGATGCTGTAGGAGTGGACATCCATGTCACA  50

seq1  GGATACCTGATGCAAGGTCCCAAACATTAGAGATGAACTCACTCCAGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACCTGATGCAAGGTCCCAAACATTAGAGATGAACTCACTCCAGCAC  100

seq1  TGCAGAAAAGCTGGGGTTAGACACTGCCAGTGAACACACAACTGCCCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAAAGCTGGGGTTAGACACTGCCAGTGAACACACAACTGCCCTAC  150

seq1  TTGATCTGCCTTGGCTGCTTAGCCTAGGGAGAAAGTAGACAAGAGAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTGCCTTGGCTGCTTAGCCTAGGGAGAAAGTAGACAAGAGAGCTG  200

seq1  GCAGGCATACAACCCAACATCAGACATCTTCAGGAAGAAATAACTCATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCATACAACCCAACATCAGACATCTTCAGGAAGAAATAACTCATTG  250

seq1  TATTACGTCTGTGCACAGCACATTGGCCCAGCGCCTACCATTCTCAGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACGTCTGTGCACAGCACATTGGCCCAGCGCCTACCATTCTCAGGGT  300

seq1  GCAAAATGAAAATAAATCCAGAGGATTAGAACAAGATAGTGAGCAGTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATGAAAATAAATCCAGAGGATTAGAACAAGATAGTGAGCAGTTTG  350

seq1  AGATAGCATAGGTGCTGAGCAGTACAAAGATTCTACAATTCTCTGAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGCATAGGTGCTGAGCAGTACAAAGATTCTACAATTCTCTGAAAAG  400

seq1  AAGCCATAGCATAGGAAGCCTGTCTCCACACAGATCTAGATCAAGGCGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATAGCATAGGAAGCCTGTCTCCACACAGATCTAGATCAAGGCGCA  450

seq1  AGCAAATGTGCCCCGGAAGTTTGCAGGAGCACCATAAGAAGAGAGTTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATGTGCCCCGGAAGTTTGCAGGAGCACCATAAGAAGAGAGTTGAA  500

seq1  GAGGTCTGCAACTATAGGTGGAACAACAATATGAACTAACCAGTACCCCC  550
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAGGTCTGCAACTATA-GTGGAACAACAATATGAACTAACCAGTACCCCC  549

seq1  AGAGCTCGTGTCTCTAGCTGCATATGTCGCAGAAGATGGCTTAGTTGGCC  600
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGAGCTCGTGTCTCTAGCTGCATATGTCGCA-AAGATGGCTTAGTTGGCC  598

seq1  ATCACTGGTAAGAGAGGCCCCTTGGTAATGCAAACTTTATATGCCCCAGT  650
      ||||||||||||||||  ||||||||||||||||||||||||||||||||
seq2  ATCACTGGTAAGAGAG--CCCTTGGTAATGCAAACTTTATATGCCCCAGT  646

seq1  ACAGGGGAATGCCAGGGCCAACAAGCAGGAGTGGGTGGGTAGGGGAGCAG  700
      ||||||||||| || |||||||||||| || ||||| |||| |||| |||
seq2  ACAGGGGAATG-CAAGGCCAACAAGCAAGAATGGGT-GGTA-GGGAACAG  693

seq1  GGCAGGGGG  709
      | |||||||
seq2  GCCAGGGGG  702