BAC Information

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BAC

Clone NameB6Ng01-151J21
Chromosome11 (Build37)17 (Build37)
Map Location 30,920,095 - 30,920,26946,070,781 - 46,071,554
singlet/doubletsingletsinglet
Overlap geneAsb3
Upstream geneC230094A16Rik, Spnb2, EG666427, LOC666432, 4930505A04Rik, Acyp2, LOC654445, LOC666452, LOC666470, LOC631243, Psme4, Gpr75, LOC100042469, 4933407N01Rik, Chac2
Downstream geneStc2, 2310022M17Rik, Cpeb4, 4930524B15Rik, Nsg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151J21.bB6Ng01-151J21.g
ACCDH947392DH947393
length165775
definitionDH947392|Mus musculus domesticus DNA, BAC clone: B6Ng01-151J21, 5' end.DH947393|Mus musculus domesticus DNA, BAC clone: B6Ng01-151J21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(30,920,095 - 30,920,269)(46,070,781 - 46,071,554)
sequence
gaattctaatcccatcacccaggaggaagaggctgatggatctctgtgag
tttgaggctagcctggtctacagagcaagttccaggacaaccagggctac
acagaaaaaccttgtctcaaacaaacaaacaagcaaccagccaaaacaac
aacaaaaaggagaaa
gaattcccagcctgccctgccccttctactgcttgctacagggttgcaaa
gcaagccccctgaaaggcatttccagaaatgtatctattagcagctggct
gccttacatattcccctggaaagtccttaggggctcagggattgaaggtg
ccttggcagccaccagtagaggctgcagtagggtcataaggaagggtctg
ggggaactgcccagttcctaccaccttatgcaagagagagaacaaagggg
ccttgctgggaggtattataagattaaatggctaggcccaggacaaaccc
agcaagccccttgggatctgaattagtaaggcccactgaaagcaggggaa
ttaacaccctggcttctcacagaggcccacatccccttttatccctgcct
gggcctcctttcgagttaatctgcagccttgcccaagtgcctgcttgggg
cctgtatgaagagccattcctctacccagaggcaaagggagccttcctgg
aaaagaacctacctgacccctgacccctgacctctagagggcacagattg
tgagcaagccgggtggcccagccactcacctggccctttggttgatgttt
gagggcattcactgttccccatcctccaaacttctccttcctgctaatga
ggtaggagtttggggacctgtgagtattagctttgtcaacttgatacaat
ctagaatcatctgggaagagtgtcagtgatggattgtcaacgttatgttt
tacctgtgtgtaagtcagtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_30920095_30920269
seq2: B6Ng01-151J21.b_74_192

seq1  TGAGTTTGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGG  50
      |||||||||||| ||||||||||||||||  |||||||||||| ||||||
seq2  TGAGTTTGAGGCTAGCCTGGTCTACAGAGCAAGTTCCAGGACAACCAGGG  50

seq1  CTACACAGAGAAACCCTGTCTCGGAAAAACCAAACCAAACCAAACCAAAC  100
      ||||||||| ||||| ||||||                            
seq2  CTACACAGAAAAACCTTGTCTC----------------------------  72

seq1  CAAACCAAAACAAACCAAACCAAAACAAAAAACCCAAAACCAAAAAACAA  150
             ||||||||       ||||||  |||              || 
seq2  -------AAACAAAC-------AAACAAGCAAC--------------CAG  94

seq1  ACAAAACAACAACAAAAAGAAGAAA  175
       |||||||||||||||||| |||||
seq2  CCAAAACAACAACAAAAAGGAGAAA  119

seq1: chr17_46070781_46071554
seq2: B6Ng01-151J21.g_68_842

seq1  GAATTCCCAGCCTGCCCTGCCCCTTCTACTGCTTGCTACAGGGTTGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGCCTGCCCTGCCCCTTCTACTGCTTGCTACAGGGTTGCAAA  50

seq1  GCAAGCCCCCTGAAAGGCATTTCCAGAAATGTATCTATTAGCAGCTGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCCCCCTGAAAGGCATTTCCAGAAATGTATCTATTAGCAGCTGGCT  100

seq1  GCCTTACATATTCCCCTGGAAAGTCCTTAGGGGCTCAGGGATTGAAGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTACATATTCCCCTGGAAAGTCCTTAGGGGCTCAGGGATTGAAGGTG  150

seq1  CCTTGGCAGCCACCAGTAGAGGCTGCAGTAGGGTCATAAGGAAGGGTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCAGCCACCAGTAGAGGCTGCAGTAGGGTCATAAGGAAGGGTCTG  200

seq1  GGGGAACTGCCCAGTTCCTACCACCTTATGCAAGAGAGAGAACAAAGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACTGCCCAGTTCCTACCACCTTATGCAAGAGAGAGAACAAAGGGG  250

seq1  CCTTGCTGGGAGGTATTATAAGATTAAATGGCTAGGCCCAGGACAAACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTGGGAGGTATTATAAGATTAAATGGCTAGGCCCAGGACAAACCC  300

seq1  AGCAAGCCCCTTGGGATCTGAATTAGTAAGGCCCACTGAAAGCAGGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCCCCTTGGGATCTGAATTAGTAAGGCCCACTGAAAGCAGGGGAA  350

seq1  TTAACACCCTGGCTTCTCACAGAGGCCCACATCCCCTTTTATCCCTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACCCTGGCTTCTCACAGAGGCCCACATCCCCTTTTATCCCTGCCT  400

seq1  GGGCCTCCTTTCGAGTTAATCTGCAGCCTTGCCCAAGTGCCTGCTTGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCCTTTCGAGTTAATCTGCAGCCTTGCCCAAGTGCCTGCTTGGGG  450

seq1  CCTGTATGAAGAGCCATTCCTCTACCCAGAGGCAAAGGGAGCCTTCCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATGAAGAGCCATTCCTCTACCCAGAGGCAAAGGGAGCCTTCCTGG  500

seq1  AAAAGAACCTACCTGACCCCTGACCCCTGACCTCTAGAGGGCACAGATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACCTACCTGACCCCTGACCCCTGACCTCTAGAGGGCACAGATTG  550

seq1  TGAGCAAGCCGGGTGGCCCAGCCACTCACCTGGCCCTTTGGTTGATGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAGCCGGGTGGCCCAGCCACTCACCTGGCCCTTTGGTTGATGTTT  600

seq1  GAGGGCATTCACTGTTCCCCATCCTCCAAACTTCTCCTTCCTGCTAATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCATTCACTGTTCCCCATCCTCCAAACTTCTCCTTCCTGCTAATGA  650

seq1  GGTAGGAGTTTGGGGACCTGTGAGTATTAGCTTTGTCAACTTGATACAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGAGTTTGGGGACCTGTGAGTATTAGCTTTGTCAACTTGATACAAT  700

seq1  CTAGAATCATCTGGGAAGAGTGTCAGTGATGGATTGTCAACGTTATG-TT  749
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTAGAATCATCTGGGAAGAGTGTCAGTGATGGATTGTCAACGTTATGTTT  750

seq1  TACCTGTGTGTAAGTCAGTGTGTGT  774
      |||||||||||||||||||||||||
seq2  TACCTGTGTGTAAGTCAGTGTGTGT  775