BAC Information

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BAC

Clone NameB6Ng01-152A01
Chromosome11 (Build37)
Map Location 85,486,556 - 85,652,722
singlet/doubletdoublet
Overlap geneBcas3, Tbx2
Upstream geneMrm1, BC022224, Ggnbp2, Pigw, Znhit3, Car4, Usp32, LOC668794, LOC234848, 1700125H20Rik, Appbp2, D630032N06Rik, Ppm1d
Downstream geneTbx4, LOC668751, Brip1, LOC668803, Ints2, Thrap1, 0610013E23Rik, Rps6kb1, Tubd1, LOC100043687, Tmem49, Ptrh2, Cltc, Dhx40
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152A01.bB6Ng01-152A01.g
ACCDH947685DH947686
length771961
definitionDH947685|Mus musculus domesticus DNA, BAC clone: B6Ng01-152A01, 5' end.DH947686|Mus musculus domesticus DNA, BAC clone: B6Ng01-152A01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,486,556 - 85,487,326)(85,651,783 - 85,652,722)
sequence
gaattcctgacactgggaacatgagctgtgagcaacatgtttgagttgct
aaatgtccaaactcggagtcaagtccatccattgtgtgaggttcacattc
ttctgcttggggtgtggttcatagtgcagggtgggtaggtacacttcctc
tgctgcgtcagctgaaacccatagaaaacattcatctctgtgcttctcgg
tcccgggaagagagggaaggcagcagcaagtgagtgccgacaccgacaca
cattgcctcactgaaggcacggccttgcagtccaggacccctcacgttaa
tacggtcagcagctcctaaggtgatgagtttgccccattttgcagaagct
tataatatctgaaatgatcagccccatctaacacaaacaacccagactgg
aacatgatagaggttgagtcaagatttggtcccaagtctgtcaccttatg
ccttttgtcacctgccctgaagcatttattagaaatttcaaaaatactag
tctttcctcattttttcttcctagcaataagttcgatttgcttctggatc
tcattgtttttctcagactgaaactgcctagattagaatatgatcttatt
ggaccccaaatctcatttgatctctggatagagcaggttaacttttagat
gccagctgagaagcctgccttataggaggtgctgagatacaggctggccc
tgggctaacaagatccccaagtaatccctgattgtgcttgttgtctaccg
ggggtgagggtgggtggaggg
gaattccaaatctttccgcaggggatattccacccaagtaactaaagagg
ttgctgtgcgcatccgatctccttatgcctctggccacattttcataaac
tctcccctgggaatttagaatttcagtaggaggttgtgggggagctaagg
ccccttccctggatgtggcgggagagttagggactcagagtagggcaaag
accaggcttgtcacttgtcactggcgacttcctagaggacctcaaagggg
ccagaaatatctgagaggtgagtcatttggggagtcaactgtccagaaaa
taactcaaaattccctccttcgttcgttcgtccagcctacagtttttcag
agccgatcatgagataaagatttttctttctcaaaaatttcctaagacca
gaaaagtgaaccccataaaatccaggagcaaccctcattggtcattcaga
agagtttttgaaatgtgctctctcacttcttgctggggttatggaggagc
aaacaggtccagagaggacgaggaacattcttaaggtcacacagggttca
gaagcaatgtcttggttagatcatgggcagttttaacctttcaggtctag
atggctttcctgcctataggttttggtttctcggaggatctgagttccta
taacctctctcaagtttctcccgcgcacctcagccaccaacaagccgctg
cgcccccctccttttggctgctgggcaaatcacaggcctttacctgagat
gccagcatatgctggggagaggtgggaacgggaaagggagccgcgtggtt
tgctgcgctggctgcggggacctagcccgccttgcgtccagccccgccgc
ggttccgggaacgggcgccttcgcctactgccactggccgtcctgtcaac
taggctagtcagatgacccatgcccatggcggagaaggttccgtggccct
ggctatttgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_85486556_85487326
seq2: B6Ng01-152A01.b_36_806

seq1  GAATTCCTGACACTGGGAACATGAGCTGTGAGCAACATGTTTGAGTTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGACACTGGGAACATGAGCTGTGAGCAACATGTTTGAGTTGCT  50

seq1  AAATGTCCAAACTCGGAGTCAAGTCCATCCATTGTGTGAGGTTCACATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCAAACTCGGAGTCAAGTCCATCCATTGTGTGAGGTTCACATTC  100

seq1  TTCTGCTTGGGGTGTGGTTCATAGTGCAGGGTGGGTAGGTACACTTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTGGGGTGTGGTTCATAGTGCAGGGTGGGTAGGTACACTTCCTC  150

seq1  TGCTGCGTCAGCTGAAACCCATAGAAAACATTCATCTCTGTGCTTCTCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCGTCAGCTGAAACCCATAGAAAACATTCATCTCTGTGCTTCTCGG  200

seq1  TCCCGGGAAGAGAGGGAAGGCAGCAGCAAGTGAGTGCCGACACCGACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGGAAGAGAGGGAAGGCAGCAGCAAGTGAGTGCCGACACCGACACA  250

seq1  CATTGCCTCACTGAAGGCACGGCCTTGCAGTCCAGGACCCCTCACGTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCTCACTGAAGGCACGGCCTTGCAGTCCAGGACCCCTCACGTTAA  300

seq1  TACGGTCAGCAGCTCCTAAGGTGATGAGTTTGCCCCATTTTGCAGAAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGTCAGCAGCTCCTAAGGTGATGAGTTTGCCCCATTTTGCAGAAGCT  350

seq1  TATAATATCTGAAATGATCAGCCCCATCTAACACAAACAACCCAGACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATCTGAAATGATCAGCCCCATCTAACACAAACAACCCAGACTGG  400

seq1  AACATGATAGAGGTTGAGTCAAGATTTGGTCCCAAGTCTGTCACCTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATAGAGGTTGAGTCAAGATTTGGTCCCAAGTCTGTCACCTTATG  450

seq1  CCTTTTGTCACCTGCCCTGAAGCATTTATTAGAAATTTCAAAAATACTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGTCACCTGCCCTGAAGCATTTATTAGAAATTTCAAAAATACTAG  500

seq1  TCTTTCCTCATTTTTTCTTCCTAGCAATAAGTTCGATTTGCTTCTGGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTCATTTTTTCTTCCTAGCAATAAGTTCGATTTGCTTCTGGATC  550

seq1  TCATTGTTTTTCTCAGACTGAAACTGCCTAGATTAGAATATGATCTTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTTTTCTCAGACTGAAACTGCCTAGATTAGAATATGATCTTATT  600

seq1  GGACCCCAAATCTCATTTGATCTCTGGATAGAGCAGGTTAACTTTTAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCCAAATCTCATTTGATCTCTGGATAGAGCAGGTTAACTTTTAGAT  650

seq1  GCCAGCTGAGAAGCCTGCCTTATAGGAGGTGCTGAGATACAGGCTGGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCTGAGAAGCCTGCCTTATAGGAGGTGCTGAGATACAGGCTGGCCC  700

seq1  TGGGCTAACAAGATCCCCAAGTAATCCCTGATTGTGCTTGTTGTCTACCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTAACAAGATCCCCAAGTAATCCCTGATTGTGCTTGTTGTCTACCG  750

seq1  GGGGTGAGGGTGGGTGGAGGG  771
      |||||||||||||||||||||
seq2  GGGGTGAGGGTGGGTGGAGGG  771

seq1: chr11_85651783_85652722
seq2: B6Ng01-152A01.g_69_1021 (reverse)

seq1  GCCATGGGCCCCGGAGCCTTCTCCGCCATGGGCATGGGTCATCTG-CTAG  49
      |||| ||||| |||| ||||||||||||||||||||||||||||| ||||
seq2  GCCA-GGGCCACGGAACCTTCTCCGCCATGGGCATGGGTCATCTGACTAG  49

seq1  CCTCGGTGGCAGG-CGG-CAGTGGCAGTA-GCGGAGGCG-CCGGTCCCGG  95
      ||| | || |||| ||| ||||||||||| ||| ||||| ||| ||||||
seq2  CCTAGTTGACAGGACGGCCAGTGGCAGTAGGCGAAGGCGCCCGTTCCCGG  99

seq1  AACCGCGGCGGGGCTGGACGC-AGGCGGGCTAGGT-CCCGCAGCCAGCGC  143
      ||||||||||||||||||||| ||||||||||||| ||||||||||||||
seq2  AACCGCGGCGGGGCTGGACGCAAGGCGGGCTAGGTCCCCGCAGCCAGCGC  149

seq1  AGCAAGCACCGCGGCTCCC-TTCCCGTT-CCACCTCT-CCCAGCATATGC  190
      ||||| |  |||||||||| |||||||| |||||||| ||||||||||||
seq2  AGCAAACCACGCGGCTCCCTTTCCCGTTCCCACCTCTCCCCAGCATATGC  199

seq1  TGGCATCTCAGGT-AAGGCCTGTGATTTG-CCGGCAGCC-AAAGGAGGGG  237
      ||||||||||||| ||||||||||||||| || |||||| ||||||||||
seq2  TGGCATCTCAGGTAAAGGCCTGTGATTTGCCCAGCAGCCAAAAGGAGGGG  249

seq1  GGCGCAGCGGCTTGTTGGTGGCTGAGGTGCGCGGGAG-AACTTGAGAGAG  286
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGCGCAGCGGCTTGTTGGTGGCTGAGGTGCGCGGGAGAAACTTGAGAGAG  299

seq1  GTTATAGGTACTCAGATCCTCCGAGAAACCAAAACCTATAGGCAGGAAAG  336
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAGGAACTCAGATCCTCCGAGAAACCAAAACCTATAGGCAGGAAAG  349

seq1  CCATCTAGACCTGAAAGGTTAAAACTGCCCATGATCTAACCAAGACATTG  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTAGACCTGAAAGGTTAAAACTGCCCATGATCTAACCAAGACATTG  399

seq1  CTTCTGAACCCTGTGTGACCTTAAGAATGTTCCTCGTCCTCTCTGGACCT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAACCCTGTGTGACCTTAAGAATGTTCCTCGTCCTCTCTGGACCT  449

seq1  GTTTGCTCCTCCATAACCCCAGCAAGAAGTGAGAGAGCACATTTCAAAAA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTCCTCCATAACCCCAGCAAGAAGTGAGAGAGCACATTTCAAAAA  499

seq1  CTCTTCTGAATGACCAATGAGGGTTGCTCCTGGATTTTATGGGGTTCACT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGAATGACCAATGAGGGTTGCTCCTGGATTTTATGGGGTTCACT  549

seq1  TTTCTGGTCTTAGGAAATTTTTGAGAAAGAAAAATCTTTATCTCATGATC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGTCTTAGGAAATTTTTGAGAAAGAAAAATCTTTATCTCATGATC  599

seq1  GGCTCTGAAAAACTGTAGGCTGGACGAACGAACGAAGGAGGGAATTTTGA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGAAAAACTGTAGGCTGGACGAACGAACGAAGGAGGGAATTTTGA  649

seq1  GTTATTTTCTGGACAGTTGACTCCCCAAATGACTCACCTCTCAGATATTT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTTCTGGACAGTTGACTCCCCAAATGACTCACCTCTCAGATATTT  699

seq1  CTGGCCCCTTTGAGGTCCTCTAGGAAGTCGCCAGTGACAAGTGACAAGCC  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCCTTTGAGGTCCTCTAGGAAGTCGCCAGTGACAAGTGACAAGCC  749

seq1  TGGTCTTTGCCCTACTCTGAGTCCCTAACTCTCCCGCCACATCCAGGGAA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTTGCCCTACTCTGAGTCCCTAACTCTCCCGCCACATCCAGGGAA  799

seq1  GGGGCCTTAGCTCCCCCACAACCTCCTACTGAAATTCTAAATTCCCAGGG  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCTTAGCTCCCCCACAACCTCCTACTGAAATTCTAAATTCCCAGGG  849

seq1  GAGAGTTTATGAAAATGTGGCCAGAGGCATAAGGAGATCGGATGCGCACA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTTATGAAAATGTGGCCAGAGGCATAAGGAGATCGGATGCGCACA  899

seq1  GCAACCTCTTTAGTTACTTGGGTGGAATATCCCCTGCGGAAAGATTTGGA  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTCTTTAGTTACTTGGGTGGAATATCCCCTGCGGAAAGATTTGGA  949

seq1  ATTC  940
      ||||
seq2  ATTC  953