BAC Information

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BAC

Clone NameB6Ng01-152A10
Chromosome11 (Build37)
Map Location 25,563,804 - 25,564,904
singlet/doubletsinglet
Overlap gene5730522E02Rik
Upstream geneLOC100042282
Downstream geneLOC100042328, LOC100042345, Fancl, Vrk2, EG628586
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152A10.bB6Ng01-152A10.g
ACCDH947703DH947704
length1,1041,144
definitionDH947703|Mus musculus domesticus DNA, BAC clone: B6Ng01-152A10, 5' end.DH947704|Mus musculus domesticus DNA, BAC clone: B6Ng01-152A10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacacacaggaatcaaaatcacaacagtgaatctcggacacatta
cttcttagcaaaattagcataacccagcacatccgagcattaaaatttaa
aaagtatttcaaactgtcctcggatcatcagcagagtcatgtcaaagatt
tttttttattggttcagaagcctaggtgtaattgtattaatattttaatg
tttgatacatattgcctgtgatacattgcttgcataaataaaaagcacca
gcattcaattgccaatgaaataatcacacagtcaagatctttattatatc
atgcattatttaattataataatcagagcccttttgaaggtaaaacaaga
ttaaaaaggttttgttttattggatctatatatttgatttaaactttaca
tgctagatttacattaagaatttataaggcatcagttcaaatggtctgtt
ataaggtttatttcttttataattagtacagtactcttaaagtactctga
ctataagataatatttcagtattttaatgagctttttaagtgtaattgat
gtaacaatcattgaattacacatttatacctgaagaataatgaaggaaac
attttaatgagaaatttaatcattattagcaaatgatctactaaactgcc
atttgctgacatttaaaagcttaatagcagaaatctgtatttttctccat
tggcatcaacattgatagtgattacttttctgttactctgattacccagg
ttaacttgctaccatcactaatttatttataaatttgagaaaactttttt
tacccacccttgtcaggtccttccagaaagagtggggcttgacatgtgga
gggataatttaaataaatttagcccctttccagcctgcagcagtttgcag
cattaaagctttctttcttgtgactattcacgcttgcatcagcttgattt
gatgaatgccctgcacattccctgatagtacctcagacagagatctagac
caatgtcaacagggttttcaaagcttcttcattctagcacacatcagcat
tcaaggccttagaaggcacgcgggggatgggggacatgggtgtggggggg
tggg
gaattcactgtcaacagtggatttgggactgataccaggaaaggacctac
ttgttccaaatcttcagtcaagcttcacaggtgaccccaaattcctatta
taggtgacatgattaaccttagctgtttaccattcattgtttaagtgata
gcaataaaaagcattgaccacagtgacaatctgaagactgcacataaatt
ccttgactatttctttcagccattgatgcttacttttttgaagcaaagga
cttctgaattgtgttcatttgcattaaagtgtttgaattttttattaaac
taataaaatttattttgaaatatacagctctttattgacattttcgaagt
catcaaaataatttataattgttaaatgccttttaaatatacatgatgtc
ttctgaagctaaaagtaatatgcactcaaccagttttaaaaacctattta
gaacattaaacatgatagaagtagaaaacaatctcttatgaagtcctcta
tgaagggaaattgtgaaaaggtcttgattagacagaatccattccatctc
catgggagaatatgcactgtaactgtagcttcatagaatgacttgggtag
tgttccttctgtttctattttatggaatagttcgaagagagtattaggtc
ttctttgaaggtctgatagaattctgcactaaacctatatggtcctgggt
tgttttggttgggagacttttaatgactgcttctatttctttagggatca
tgggattgtttagatactttatctgatcctgatttaacttcagtatttgg
tatctgtccatttcatccagattttcaagttttgttgaatataggcttct
gtagtaggatttgatggttttttgaatttcctcagtttctactgttatat
ctctcttttcattctgattttgtaatttggatactgtctctgtgcctctg
gtagtctggctaaagttcatctattgtgttgatttctctagaaacagcct
cttgcctttgttgaatctttgtattagtccttgttggtttctacttggtt
tatatacagcctgagattgattaatttcctgccatccactccctcttggg
ggtgatctgcctttttttggctagaaactatcagggtgaactgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_25563804_25564904
seq2: B6Ng01-152A10.b_44_1147

seq1  GAATTCACACACAGGAATCAAAATCACAACAGTGAATCTCGGACACATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACACAGGAATCAAAATCACAACAGTGAATCTCGGACACATTA  50

seq1  CTTCTTAGCAAAATTAGCATAACCCAGCACATCCGAGCATTAAAATTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAGCAAAATTAGCATAACCCAGCACATCCGAGCATTAAAATTTAA  100

seq1  AAAGTATTTCAAACTGTCCTCGGATCATCAGCAGAGTCATGTCAAAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATTTCAAACTGTCCTCGGATCATCAGCAGAGTCATGTCAAAGATT  150

seq1  TTTTTTTATTGGTTCAGAAGCCTAGGTGTAATTGTATTAATATTTTAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATTGGTTCAGAAGCCTAGGTGTAATTGTATTAATATTTTAATG  200

seq1  TTTGATACATATTGCCTGTGATACATTGCTTGCATAAATAAAAAGCACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATACATATTGCCTGTGATACATTGCTTGCATAAATAAAAAGCACCA  250

seq1  GCATTCAATTGCCAATGAAATAATCACACAGTCAAGATCTTTATTATATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCAATTGCCAATGAAATAATCACACAGTCAAGATCTTTATTATATC  300

seq1  ATGCATTATTTAATTATAATAATCAGAGCCCTTTTGAAGGTAAAACAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTATTTAATTATAATAATCAGAGCCCTTTTGAAGGTAAAACAAGA  350

seq1  TTAAAAAGGTTTTGTTTTATTGGATCTATATATTTGATTTAAACTTTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGGTTTTGTTTTATTGGATCTATATATTTGATTTAAACTTTACA  400

seq1  TGCTAGATTTACATTAAGAATTTATAAGGCATCAGTTCAAATGGTCTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGATTTACATTAAGAATTTATAAGGCATCAGTTCAAATGGTCTGTT  450

seq1  ATAAGGTTTATTTCTTTTATAATTAGTACAGTACTCTTAAAGTACTCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTTTATTTCTTTTATAATTAGTACAGTACTCTTAAAGTACTCTGA  500

seq1  CTATAAGATAATATTTCAGTATTTTAATGAGCTTTTTAAGTGTAATTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAGATAATATTTCAGTATTTTAATGAGCTTTTTAAGTGTAATTGAT  550

seq1  GTAACAATCATTGAATTACACATTTATACCTGAAGAATAATGAAGGAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAATCATTGAATTACACATTTATACCTGAAGAATAATGAAGGAAAC  600

seq1  ATTTTAATGAGAAATTTAATCATTATTAGCAAATGATCTACTAAACTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATGAGAAATTTAATCATTATTAGCAAATGATCTACTAAACTGCC  650

seq1  ATTTGCTGACATTTAAAAGCTTAATAGCAGAAATCTGTATTTTTCTCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTGACATTTAAAAGCTTAATAGCAGAAATCTGTATTTTTCTCCAT  700

seq1  TGGCATCAACATTGATAGTGATTACTTTTCTGTTACTCTGATTACCCAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCAACATTGATAGTGATTACTTTTCTGTTACTCTGATTACCCAGG  750

seq1  TTAACTTGCTACCATCACTAATTTATTTATAAATTTGAGAAAACTTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTGCTACCATCACTAATTTATTTATAAATTTGAGAAAACTTTTTT  800

seq1  TACCCACCCTTGTCAGGTCCTTCCAGAAAGAGTGGGGCTTGACATGTGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACCCTTGTCAGGTCCTTCCAGAAAGAGTGGGGCTTGACATGTGGA  850

seq1  GGGATAATTTAAATAAA-TTAGCCCCTTTCCAGCCTGCAGCAGTTTGCAG  899
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGGATAATTTAAATAAATTTAGCCCCTTTCCAGCCTGCAGCAGTTTGCAG  900

seq1  CATTAAAGCTTTCTTTCTTGTGACTATTCACGCTTGCATCAGCTTGATTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CATTAAAGCTTTCTTTCTTGTGACTATTCACGCTTGCATCAGCTTGA-TT  949

seq1  TGATGAATGCCCTGCACATTCCCTGATAGTACCTCAGACAGAGATCTTAG  999
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGATGAATGCCCTGCACATTCCCTGATAGTACCTCAGACAGAGATC-TAG  998

seq1  ACCAATGTCAACAGGGGTTTCAAAGCTCCTTCATTTCTAGCACACATCAG  1049
      |||||||||||||||| |||||||||| ||||| ||||||||||||||||
seq2  ACCAATGTCAACAGGGTTTTCAAAGCTTCTTCA-TTCTAGCACACATCAG  1047

seq1  CATTCAAGGCCTAAG-AGGCA-GCGGGGGAT-GGGGACA--GTGGTTGGG  1094
      |||||||||||| || ||||| ||||||||| |||||||  |  || |||
seq2  CATTCAAGGCCTTAGAAGGCACGCGGGGGATGGGGGACATGGGTGTGGGG  1097

seq1  GGGTGGG  1101
      |||||||
seq2  GGGTGGG  1104