This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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BAC name
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Search Result
BAC
Clone Name
B6Ng01-153B06
Chromosome
11 (Build37)
Map Location
10,161,145 - 10,293,050
singlet/doublet
doublet
Overlap gene
none
Upstream gene
Abca13
,
LOC665435
,
LOC382483
Downstream gene
Vwc2
,
Zpbp
Link
Open Mouse BAC browser
Click to get alignment info.
name
Abca13
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:268379
MGI:2388707
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC665435
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:665435
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 158 ESTs, 4 Proteins
pseudo
: _no_value
name
LOC382483
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:382483
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins
pseudo
: _no_value
name
Vwc2
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:319922
MGI:2442987
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Zpbp
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:53604
MGI:1855701
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Abca13
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:116292743
GeneID:268379
MGI:2388707
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: ATP-binding cassette, sub-family A (ABC1), member 13
transcript_id
: NM_178259.3
name
Vwc2
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:31342639
GeneID:319922
MGI:2442987
definition
exception
: mismatches in transcription
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: von Willebrand factor C domain containing 2
transcript_id
: NM_177033.2
name
Zpbp
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:7657604
GeneID:53604
MGI:1855701
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: zona pellucida binding protein
transcript_id
: NM_015785.1
name
Abca13
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:116292744
GeneID:268379
MGI:2388707
definition
GO_function
: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
codon_start
: 1
product
: ATP-binding cassette transporter
protein_id
: NP_839990.2
name
Vwc2
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:28892913
GeneID:319922
MGI:2442987
definition
codon_start
: 1
note
: novel von Willebrand factor type C domain containing protein
product
: von Willebrand factor C domain containing 2
protein_id
: NP_796007.1
name
Zpbp
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:7657605
CCDS:CCDS24434.1
GeneID:53604
MGI:1855701
definition
GO_component
: GO:0005575 - cellular_component [Evidence ND]; GO:0005576 - extracellular region [Evidence IEA]
GO_function
: GO:0003674 - molecular_function [Evidence ND]
GO_process
: GO:0007339 - binding of sperm to zona pellucida [Evidence IEA]; GO:0008150 - biological_process [Evidence ND]
codon_start
: 1
product
: zona pellucida binding protein
protein_id
: NP_056600.1
name
LOC382483
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:382483
definition
number
: 1
pseudo
: _no_value
name
LOC382483
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:382483
definition
number
: 2
pseudo
: _no_value
name
LOC665435
(CDS detail)
type
misc_RNA
link
vega
ensembl
NCBI
xref
GI:149261610
GeneID:665435
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 158 ESTs, 4 Proteins
product
: similar to EIF3S6
pseudo
: _no_value
transcript_id
: XR_032750.1
clone name
MSMg01-315K02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-406I24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-439O01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-260H07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-374N02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-288J08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-268L10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-538G18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-057H01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-446J17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-469N05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-153K15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-538H01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-357A14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-135I14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-180E03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-426O15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-375E08
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-511D14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-502M22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-504O16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-215O04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-232M08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-215N03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-409M10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-159P11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-155L01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-216N20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-067D05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-389E22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-412D13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-290E24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-123F22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-494O16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-373J01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-454C10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-323B24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-424G04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-361P23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-206O05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-273K23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-512G15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-447J16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-388D06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-516F14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-104K02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-453I05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-545M08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-470N02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-370P24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-126N08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-084N09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-447P15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-115P11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-134D07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-096O20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-062B22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-391C03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-260K01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-159G13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-330B22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-433K09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-426E23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-346N16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-317P02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-445K06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-193G21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-431I10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-397D13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-237G12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-339N12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-063I08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-182I17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-424A21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-480A02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-155O13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-149N10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-372F23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-513P16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-154A21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-529A10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-529A11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-403A18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-361C12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-115M21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-429P17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-426M09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-508G09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-113E19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-149O01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-152J13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-184O20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-155P13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-380G03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-112D21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-470C13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-226K10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-131H06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-118H15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-117D11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-199C02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-039M16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-083L05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-157L05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-207E13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-076P05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-091H10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-024E05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-089G03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-221O10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-345I07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-125D15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-210I04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-141K23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-295A03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-300M13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-137B22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-309H14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-090A08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-242E17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-121M12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-338L15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-128B24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-212L08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-283H17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-175P06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-267P03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-111C18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-325N24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-200N05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-058N10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-255I11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-233O21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-162H12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-212N04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-238A09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-111I07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-082C13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-064D17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-135F22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-289A15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-219I10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-019I15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-153B06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-026C21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-097L15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-075B09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-039J08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-274L06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-132D05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-129E03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-223H15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-195K10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-150A01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-003N13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-098I16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-348B01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-233P20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-104B16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-012D20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-175L18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-303N24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-224K12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-089M08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-291D03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-254E16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-289N14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-292L01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-023O05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-154E11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-151E08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-255C08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-138A08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-007B07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-067B18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-291H18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-047C12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-223P23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-179E14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-184O06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-073E17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-238H14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-065C05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-164P07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-151I01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-182N13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-057K07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-255B14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-152B07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-316F15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-152P06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-349P18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-121G23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-347F17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-107N09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-125B03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-040I22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-083I04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-142D24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-200O03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-083F03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-137P18
singlet/doublet
doublet
plural/unique
unique
