BAC Information

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BAC

Clone NameB6Ng01-153B06
Chromosome11 (Build37)
Map Location 10,161,145 - 10,293,050
singlet/doubletdoublet
Overlap genenone
Upstream geneAbca13, LOC665435, LOC382483
Downstream geneVwc2, Zpbp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153B06.bB6Ng01-153B06.g
ACCDH948489DH948490
length1,024676
definitionDH948489|Mus musculus domesticus DNA, BAC clone: B6Ng01-153B06, 5' end.DH948490|Mus musculus domesticus DNA, BAC clone: B6Ng01-153B06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,161,145 - 10,161,771)(10,292,465 - 10,293,050)
sequence
gaattcattcacatttttttaatctatgttgtattttgtctctctagctc
cattctttcttatttatttatttatttatttatttatttattattgttta
tattagctattttacactcaattcttttttctttttttttaaattggata
ttttatttatttatatttcaaatgttatctcctttcttgatatttccccc
tctccgcagaaatcccttatcctatgccctctcctcctgcttctatgagg
gtgtgcccccacccacccactcctgcctccccactctcacatttccctac
actggggcatcaagccatcacaggaccaagggcctcttctgccattaatg
cctgaaaaggccatcttctgctacatatacagctggaacaatgggttcct
ccatgtgtattccttgattggtggtttagaccctgggagctctggttggt
tcatattgttcttcctatggggttgcaaaccccttcagctccttcagtcc
tttctctatctccttcactggagacagagtgatcagttcaaacgttggct
gtgagtacccacctctgtatatgtcaggttctggcagggcctctcagaat
acagctatatcaggctcctgtcagcatgcatttcttggcatccacactag
tgtctgcatttggtaactatatatgggatggatcccaaggtaaggcagtc
tctgcatggcctttccttcagtctctgctccaaactttgtctccatattt
gctcttgtgagtattttgttacccctgctaagaagtactgaagcaccaac
actttgttcttccttcttcttgaccttcatgtggtctgtgaattgtaaat
tgggtatcctgagcttatcagagagtgcatactatgtgagtttttttgtg
attgggttacctcacacagaagtttaagaattcattgtttttatagctga
gtagtacttcattgtataaatgtactacatttctgtatccattccttctg
ttgaaggacatccaggttctttcc
gaattctagaaataggatcatagctgggtggtggtggcgcacgcctttga
tcccagcacattgggaggcacaggcaggtggatttctgagttcaaggcca
gcctggtctacagagtgagttccaggacagccagggctacacagagaaac
cctgttttgaaaaaaacaaccaagaaagaaagaaagaaagaaagaaagaa
agaaagaaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaag
gaagggaaagaaagggagagagagaaagaaagaaaaagagagagagagag
aaagaaaggaagaaagagagaaagaaagagagagagagaaagaaaggaag
aaagagagaaagaaagagagagagaaagaaagaaagaaagaaagaaagaa
cgaacgaacgaacgaaagaaagaaagaaagaaagaaagagagaaagagag
aaagagagagagaggaggaagagaccctagagaagtagggccatgaaata
aatgcaataggagcaaagaaaaggaaggtagatttcaggcagggagtgtc
agggaaggaaagaagtacagttacaccttttctgtgaagacagcatgatg
aacctattactttgtattctaactaagccagagtagtagtagtagtagta
gtagtagtagtagtagtagtagtagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_10161145_10161771
seq2: B6Ng01-153B06.b_49_675

seq1  GAATTCATTCACATTTTTTTAATCTATGTTGTATTTTGTCTCTCTAGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCACATTTTTTTAATCTATGTTGTATTTTGTCTCTCTAGCTC  50

seq1  CATTCTTTCTTATTTATTTATTTATTTATTTATTTATTTATTATTGTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTCTTATTTATTTATTTATTTATTTATTTATTTATTATTGTTTA  100

seq1  TATTAGCTATTTTACACTCAATTCTTTTTTCTTTTTTTTTAAATTGGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCTATTTTACACTCAATTCTTTTTTCTTTTTTTTTAAATTGGATA  150

seq1  TTTTATTTATTTATATTTCAAATGTTATCTCCTTTCTTGATATTTCCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTATTTATATTTCAAATGTTATCTCCTTTCTTGATATTTCCCCC  200

seq1  TCTCCGCAGAAATCCCTTATCCTATGCCCTCTCCTCCTGCTTCTATGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCGCAGAAATCCCTTATCCTATGCCCTCTCCTCCTGCTTCTATGAGG  250

seq1  GTGTGCCCCCACCCACCCACTCCTGCCTCCCCACTCTCACATTTCCCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCCCCACCCACCCACTCCTGCCTCCCCACTCTCACATTTCCCTAC  300

seq1  ACTGGGGCATCAAGCCATCACAGGACCAAGGGCCTCTTCTGCCATTAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGCATCAAGCCATCACAGGACCAAGGGCCTCTTCTGCCATTAATG  350

seq1  CCTGAAAAGGCCATCTTCTGCTACATATACAGCTGGAACAATGGGTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAAAGGCCATCTTCTGCTACATATACAGCTGGAACAATGGGTTCCT  400

seq1  CCATGTGTATTCCTTGATTGGTGGTTTAGACCCTGGGAGCTCTGGTTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGTATTCCTTGATTGGTGGTTTAGACCCTGGGAGCTCTGGTTGGT  450

seq1  TCATATTGTTCTTCCTATGGGGTTGCAAACCCCTTCAGCTCCTTCAGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTGTTCTTCCTATGGGGTTGCAAACCCCTTCAGCTCCTTCAGTCC  500

seq1  TTTCTCTATCTCCTTCACTGGAGACAGAGTGATCAGTTCAAACGTTGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTATCTCCTTCACTGGAGACAGAGTGATCAGTTCAAACGTTGGCT  550

seq1  GTGAGTACCCACCTCTGTATATGTCAGGTTCTGGCAGGGCCTCTCAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTACCCACCTCTGTATATGTCAGGTTCTGGCAGGGCCTCTCAGAAT  600

seq1  ACAGCTATATCAGGCTCCTGTCAGCAT  627
      |||||||||||||||||||||||||||
seq2  ACAGCTATATCAGGCTCCTGTCAGCAT  627

seq1: chr11_10292465_10293050
seq2: B6Ng01-153B06.g_159_745 (reverse)

seq1  ACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTCTGGC  50

seq1  TTAGTTAGAATACAAAGTAATAGGTTCATCATGCTGTCTTCACAG-AAAG  99
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTAGTTAGAATACAAAGTAATAGGTTCATCATGCTGTCTTCACAGAAAAG  100

seq1  GTGTAACTGTACTTCTTTCCTTCCCTGACACTCCCTGCCTGAAATCTACC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAACTGTACTTCTTTCCTTCCCTGACACTCCCTGCCTGAAATCTACC  150

seq1  TTCCTTTTCTTTGCTCCTATTGCATTTATTTCATGGCCCTACTTCTCTAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTCTTTGCTCCTATTGCATTTATTTCATGGCCCTACTTCTCTAG  200

seq1  GGTCTCTTCCTCCTCTCTCTCTCTTTCTCTCTTTCTCTCTTTCTTTCTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTTCCTCCTCTCTCTCTCTTTCTCTCTTTCTCTCTTTCTTTCTTT  250

seq1  CTTTCTTTCTTTCGTTCGTTCGTTCGTTCTTTCTTTCTTTCTTTCTTTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCGTTCGTTCGTTCGTTCTTTCTTTCTTTCTTTCTTTCT  300

seq1  TTCTCTCTCTCTTTCTTTCTCTCTTTCTTCCTTTCTTTCTCTCTCTCTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTCTCTTTCTTTCTCTCTTTCTTCCTTTCTTTCTCTCTCTCTCT  350

seq1  TTCTTTCTCTCTTTCTTCCTTTCTTTCTCTCTCTCTCTCTTTTTCTTTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTCTCTTTCTTCCTTTCTTTCTCTCTCTCTCTCTTTTTCTTTCT  400

seq1  TTCTCTCTCTCCCTTTCTTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTCTCCCTTTCTTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTC  450

seq1  CTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  500

seq1  TTCTTGGTTGTTTTTTTCAAAACAGGGTTTCTCTGTGTAGCCCTGGCTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGTTGTTTTTTTCAAAACAGGGTTTCTCTGTGTAGCCCTGGCTGT  550

seq1  CCTGGAACTCACTCTGTAGACCAGGCTGGCCTTGAAC  586
      |||||||||||||||||||||||||||||||||||||
seq2  CCTGGAACTCACTCTGTAGACCAGGCTGGCCTTGAAC  587