BAC Information

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BAC

Clone NameB6Ng01-153I20
Chromosome11 (Build37)
Map Location 74,746,626 - 74,819,623
singlet/doubletdoublet
Overlap geneSmg6
Upstream geneOlfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163, LOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412, Garnl4, E130309D14Rik, 1300001I01Rik, Pafah1b1, Mett10d, Mnt, Rutbc1, Tsr1, Srr, LOC100042478
Downstream geneLOC100043429, LOC627835, Hic1, LOC668604, Ovca2, Dph1, Rtn4rl1, Rpa1, Smyd4, Serpinf1, LOC100043447, Serpinf2, Wdr81, LOC100042498, 2010305C02Rik, Prpf8, Rilp, Scarf1, Slc43a2, Pitpna, LOC654359, Pps, Myo1c, Crk, Ywhae, Doc2b, Rph3al, 1700016K19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153I20.bB6Ng01-153I20.g
ACCDH948832DH948833
length844717
definitionDH948832|Mus musculus domesticus DNA, BAC clone: B6Ng01-153I20, 5' end.DH948833|Mus musculus domesticus DNA, BAC clone: B6Ng01-153I20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,818,776 - 74,819,623)(74,746,626 - 74,747,206)
sequence
gaattcacagaaactgtgacaacaggcacagacctgctcaggttcaagcc
agataaaagacctagcagtgagagaaggaagtggacataggaccccacct
ctaattaggaagctatttgcaattgatatctgacagcaaatggaaaatct
gtggtgtaccaatcacactctaaggaaggcccaagcctaagagtagctgg
ctaacacaaaacaaactcagattttcttgtgagctttttgttttttgggg
ttttttttttgtttttgtttttttcttacttttttttatttgtttttgag
agagagagaacatacaggaagttgtttggataggaggatctgggaggagt
tgagaaaccatgaccaaaatatattatgaaaaaaaattttaagtgaatag
aggggaataatactgctttaattttgaagataatgatatagttaaatcct
aaaaaacatgcaaaataaagttctgtggaaaacacaagcattataaatca
aagaataggccgggcagtggtggcgcatgcctttaatcccagcacttggg
aggcagaggcaggcggatttctgagttcgaggccagcctggtctacagag
tgagttccaggacagccagagctatatagagaaaccctgtctcaaaaacc
aaaataaataaataaataaataaataaataaaagatattctgaccagaca
tggttggtcacgcctttaatcataattctaggaatgcagagacaggtgca
tcttttgtgagccagcctggtctacatggtgagttgcagacagcaagggc
atgtatagtaagatcctgcatctaaaaatagactgatgatcgat
gaattctaagcatgcctgggctatacaaaattctatttcacaaacaaaaa
ccaaattgtaatgtcattcacatgatgcatttcacacttgtaatctaagc
acttgagaaaatgaagcaggaggattgccatgagtttgaaaccagtcttg
ggtacatagtgagttctagggtaggtaatctggacttcagagtgagatca
tgtctcaaaagaaaacaaggaggctgtaagatgactcagttattaagagc
agttgttgctcctagcagaagacctgggttttgttcctagcatccacatg
gctacttacaaccacttgtaactgcagttccaggggatccagtgctgcct
tctgacttctgcaggtgccactcatgtaagcgatgcacaataaatacata
tggacaaaacactaaacacaaaataaaacatttttgtaaaagatttattt
tatgtatataagtacactgtagctgtcttcagacacaccagaaggaggca
ttggatctgattacagatggttgtgagccaccatgtggttgctggaaatt
gaactcaggaccttctgaagagcagtcagtgctcttaaccactgagctat
ctctccagcctccaactttttggtttttttagatgtttttgaggcagaat
ctcaatatatagatcaaataccctggaattcatttgtatagttctgactg
gtttttgaaatcaagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_74818776_74819623
seq2: B6Ng01-153I20.b_40_883 (reverse)

seq1  ATCGATCATCAGTCTATTTTTAGATGCAGGATCTTACTATACATGCCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGATCATCAGTCTATTTTTAGATGCAGGATCTTACTATACATGCCCTT  50

seq1  GCTGTCCTGCAACTCACCATGTAGACCAGGCTGGCCTCACAAAAGATGCA  100
      ||||| |||||||||||||||||||||||||||| |||||||||||||||
seq2  GCTGT-CTGCAACTCACCATGTAGACCAGGCTGG-CTCACAAAAGATGCA  98

seq1  CCTGTCTCTGCCTTCCTAGAATTATGATTAAAGGCGTGACCAACCATGTC  150
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTCTGCATTCCTAGAATTATGATTAAAGGCGTGACCAACCATGTC  148

seq1  TGGTCAGAATATTCTTTTATTTATTTATTTATTTATTTATTTATTTTGGT  200
      ||||||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  TGGTCAGAATA-TCTTTTATTTATTTATTTATTTATTTATTTATTTTGG-  196

seq1  TTTTTGAGACAGGGTTTCTCTATATAGCTCTGGCTGTCCTGGAACTCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGACAGGGTTTCTCTATATAGCTCTGGCTGTCCTGGAACTCACT  246

seq1  CTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCC  296

seq1  CAAGTGCTGGGATTAAAGGCATGCGCCACCACTGCCCGGCCTATTCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCTGGGATTAAAGGCATGCGCCACCACTGCCCGGCCTATTCTTTG  346

seq1  ATTTATAATGCTTGTGTTTTCCACAGAACTTTATTTTGCATGTTTTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAATGCTTGTGTTTTCCACAGAACTTTATTTTGCATGTTTTTTAG  396

seq1  GATTTAACTATATCATTATCTTCAAAATTAAAGCAGTATTATTCCCCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAACTATATCATTATCTTCAAAATTAAAGCAGTATTATTCCCCTCT  446

seq1  ATTCACTTAAAATTTTTTTTCATAATATATTTTGGTCATGGTTTCTCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTTAAAATTTTTTTTCATAATATATTTTGGTCATGGTTTCTCAAC  496

seq1  TCCTCCCAGATCCTCCTATCCAAACAACTTCCTGTATGTTCTCTCTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCAGATCCTCCTATCCAAACAACTTCCTGTATGTTCTCTCTCTCT  546

seq1  CAAAAACAAATAAAAAAAAGTAAGAAAAAAACAAAAACAAAAAAAAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAAATAAAAAAAAGTAAGAAAAAAACAAAAACAAAAAAAAAACC  596

seq1  CCAAAAAACAAAAAGCTCACAAGAAAATCTGAGTTTGTTTTGTGTTAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAACAAAAAGCTCACAAGAAAATCTGAGTTTGTTTTGTGTTAGCC  646

seq1  AGCTACTCTTAGGCTTGGGCCTTCCTTAGAGTGTGATTGGTACACCACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACTCTTAGGCTTGGGCCTTCCTTAGAGTGTGATTGGTACACCACAG  696

seq1  ATTTTCCATTTGCTGTCAGATATCAATTGCAAATAGCTTCCTAATTAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCATTTGCTGTCAGATATCAATTGCAAATAGCTTCCTAATTAGAG  746

seq1  GTGGGGTCCTATGTCCACTTCCTTCTCTCACTGCTAGGTCTTTTATCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTCCTATGTCCACTTCCTTCTCTCACTGCTAGGTCTTTTATCTGG  796

seq1  CTTGAACCTGAGCAGGTCTGTGCCTGTTGTCACAGTTTCTGTGAATTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACCTGAGCAGGTCTGTGCCTGTTGTCACAGTTTCTGTGAATTC  844

seq1: chr11_74746626_74747206
seq2: B6Ng01-153I20.g_68_648

seq1  GAATTCTAAGCATGCCTGGGCTATACAAAATTCTATTTCACAAACAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGCATGCCTGGGCTATACAAAATTCTATTTCACAAACAAAAA  50

seq1  CCAAATTGTAATGTCATTCACATGATGCATTTCACACTTGTAATCTAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTGTAATGTCATTCACATGATGCATTTCACACTTGTAATCTAAGC  100

seq1  ACTTGAGAAAATGAAGCAGGAGGATTGCCATGAGTTTGAAACCAGTCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGAAAATGAAGCAGGAGGATTGCCATGAGTTTGAAACCAGTCTTG  150

seq1  GGTACATAGTGAGTTCTAGGGTAGGTAATCTGGACTTCAGAGTGAGATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATAGTGAGTTCTAGGGTAGGTAATCTGGACTTCAGAGTGAGATCA  200

seq1  TGTCTCAAAAGAAAACAAGGAGGCTGTAAGATGACTCAGTTATTAAGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAAAAGAAAACAAGGAGGCTGTAAGATGACTCAGTTATTAAGAGC  250

seq1  AGTTGTTGCTCCTAGCAGAAGACCTGGGTTTTGTTCCTAGCATCCACATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTGCTCCTAGCAGAAGACCTGGGTTTTGTTCCTAGCATCCACATG  300

seq1  GCTACTTACAACCACTTGTAACTGCAGTTCCAGGGGATCCAGTGCTGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTACAACCACTTGTAACTGCAGTTCCAGGGGATCCAGTGCTGCCT  350

seq1  TCTGACTTCTGCAGGTGCCACTCATGTAAGCGATGCACAATAAATACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTTCTGCAGGTGCCACTCATGTAAGCGATGCACAATAAATACATA  400

seq1  TGGACAAAACACTAAACACAAAATAAAACATTTTTGTAAAAGATTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAAAACACTAAACACAAAATAAAACATTTTTGTAAAAGATTTATTT  450

seq1  TATGTATATAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGGAGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATATAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGGAGGCA  500

seq1  TTGGATCTGATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATCTGATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAAATT  550

seq1  GAACTCAGGACCTTCTGAAGAGCAGTCAGTG  581
      |||||||||||||||||||||||||||||||
seq2  GAACTCAGGACCTTCTGAAGAGCAGTCAGTG  581