BAC Information

Click to search

BAC

Clone NameB6Ng01-155H12
Chromosome11 (Build37)
Map Location 63,517,986 - 63,636,871
singlet/doubletdoublet
Overlap geneLOC100041690
Upstream geneZfp287, LOC626482, LOC100042766, Zfp286, Trim16, Fbxw10, Fam18b, Cdrt4, Tekt3, Pmp22, LOC433423, LOC100042799
Downstream geneLOC654442, LOC668297, Hs3st3b1, Cox10, 2810001G20Rik, EG544785, Hs3st3a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155H12.bB6Ng01-155H12.g
ACCDH950242DH950243
length1,1181,215
definitionDH950242|Mus musculus domesticus DNA, BAC clone: B6Ng01-155H12, 5' end.DH950243|Mus musculus domesticus DNA, BAC clone: B6Ng01-155H12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,635,740 - 63,636,871)(63,517,986 - 63,519,221)
sequence
gaattctcaggagagagaatgcatgatactgcaggcaaggaaatgagctt
gaaacatacatgtcatcactagaattgtgtcttagttatgcagtgatgtt
tgtatgaatttgtgtcctgaggaaagatgaagtgagtggtggagtcatat
ggacacgagtgtaacggatgctggcttcgtagcaatgcacagcttggggg
acacaatagaaagataactagaactttgtctctattcttaagcacctgcc
tgagtgtttccccgctcataatttgcatattccttcccccacaactaccc
caagaggccccagcacttttttctgccaagagtcttgagcatggctatgt
tgacaacaacatagttgctttgagaaaagagggaatgaaaaaaaaatgca
agaatttgttcaagtcacattcagagtaaggtcacagacagcttaccaga
atctttggggaattttaaacttcctcaaaacaaaaccaaaaaggactcat
gaagccaggacctgaattggatgctttctatttgcaacctgccactcaga
atggaaacagggcagcaaagcaagtttatacctttgaagatggtgtggaa
ccaaagctgaatgaggaacagaaaactggagaactcagaagatgaaagaa
ggtactggcaggtagtagaatcagataaaagggtttcctacagctggcaa
cactatcaaaggtggcattgttactgatggacaaacaatttgccattttt
cttcaaaggagtgttagccattccagccctgtgatgccaagcaagaccct
tgaaagcctggctttgctctaatgttgtttgagtacacacacaaacacac
acacacacacacacacacacacacacacacacacacacacacatcacaca
tttacccatattttatcttaaatatgactttataagtgagtcttcttaag
ctgtgccagatgagctggacccctctgtgtgtttcatgtccctgtgagtg
gagtaatgggaagtcactgtttttttttattaatggatttttccttatta
acatttcaatgttaatcccctttccagttgtcctcaccccaagaccccta
tccatccattctccccct
gaattctttatcagtcttgcctccagtaaacagagactgaagagtcccat
cacttcaagcaaagctcataggggaaagggttcataaggattcttcctgc
atcctggaattacagaagaagacgaaattaaaaacatcttcactcacatt
tagggagtcctgggctgagtagtgggtaccaggtagcatacacaagttct
ttcaaagctgggatgcaagtctgcttaaagaacagaatgcagacctgatt
tcagacacaaaggaggctggcatctggcttctgaccactcaaaacattct
tgaggcaaatactgcagtttagttccagagatatgtgggccttggagctc
ctaggtaaaggagaagagcaatgtggctggggccatgattttggaagaca
gggctaaccagaaatagaaagaagaattgcagggtgtattttcaaggacc
gagtgggaatcattgtttagtgctacttaacgtctaaaactgaaagctca
cctccagagggcttagctgaccaagccgtcttaactcagtccacttcccc
aaacgtataagtcgtcttgatgcacttcagaatcggactgcttttgcctg
atattaaaacagttcaccaacgagccttctgtcaatcaaatgtcagcttg
acagccaccgctttttgtttaactgaatggagctgctaagcagtcagaag
gattggatcacagagaggacaaaaggcttgaaggctgaagttgaggttac
aatctgcttccactctgaattccctgcagtccgccctgtacatcttagtg
aaaatgtttgcattcggtcataaactgggcatatcatccacaagctgaga
gccctggagggctttcccatacccttaaaatctgaaccccccgccccccg
ccttccagcctccttctgctgtttgaatgtggactgtcttctcccagctg
cttccactttccctggatgttcttttctgggatatttgatggccagttct
tctcctttctcgagtctcagttcagatgtcacttctcaagagtagttctt
gaagtaatactgcgcacaagtttgcttctgtcctcttcctaaatgatcta
tctatctctatcctgcattataattatccactgtttaccatgtaattatc
tgtggctacagaaagcagtggcaaggcaggaattttcgccctgctttctt
tatctctcaacaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_63635740_63636871
seq2: B6Ng01-155H12.b_48_1165 (reverse)

seq1  AGGGGGAGAAAGGATGGGATAGGGGGCTTGGGGTGAGGACCAACTGGGAA  50
      |||||||||| |||| ||||||||| ||||||||||||| ||||| ||||
seq2  AGGGGGAGAATGGAT-GGATAGGGGTCTTGGGGTGAGGA-CAACT-GGAA  47

seq1  AGGGGA-TAACATTTGAAATGTAAATAAAGAAAATATCCAATTAATAAAA  99
      |||||| ||||| ||||||||| ||||| ||||| |||| |||||| |||
seq2  AGGGGATTAACA-TTGAAATGTTAATAAGGAAAA-ATCC-ATTAAT-AAA  93

seq1  AAAAAACAGTGACTTCCCATTAACTCCACTCCACAGGGGACATGAAACAC  149
      ||||||||||||||||||||| |||||||| |||| ||||||||||||||
seq2  AAAAAACAGTGACTTCCCATT-ACTCCACT-CACA-GGGACATGAAACAC  140

seq1  ACAGAGGTGTCCAGCCTCATCCTGGCACAGCTTAAGAAGACTCACTTATA  199
      ||||||| |||||| ||||| |||||||||||||||||||||||||||||
seq2  ACAGAGGGGTCCAG-CTCAT-CTGGCACAGCTTAAGAAGACTCACTTATA  188

seq1  AAGTCATATTTAAGATAAAAATATGTGTAAATGTGTGATGTGTGTGTGTG  249
      |||||||||||||||| |||||||| ||||||||||||  ||||||||||
seq2  AAGTCATATTTAAGAT-AAAATATGGGTAAATGTGTGA--TGTGTGTGTG  235

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTA  285

seq1  CTCAAACAACATTAGAGCAAAGCCAGGCTTTCAAGGGTCTTGCTTGGCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACAACATTAGAGCAAAGCCAGGCTTTCAAGGGTCTTGCTTGGCAT  335

seq1  CACAGGGCTGGAATGGCTAACACTCCTTTGAAGAAAAATGGCAAATTGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGCTGGAATGGCTAACACTCCTTTGAAGAAAAATGGCAAATTGTT  385

seq1  TGTCCATCAGTAACAATGCCACCTTTGATAGTGTTGCCAGCTGTAGGAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATCAGTAACAATGCCACCTTTGATAGTGTTGCCAGCTGTAGGAAA  435

seq1  CCCTTTTATCTGATTCTACTACCTGCCAGTACCTTCTTTCATCTTCTGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTATCTGATTCTACTACCTGCCAGTACCTTCTTTCATCTTCTGAG  485

seq1  TTCTCCAGTTTTCTGTTCCTCATTCAGCTTTGGTTCCACACCATCTTCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGTTTTCTGTTCCTCATTCAGCTTTGGTTCCACACCATCTTCAA  535

seq1  AGGTATAAACTTGCTTTGCTGCCCTGTTTCCATTCTGAGTGGCAGGTTGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATAAACTTGCTTTGCTGCCCTGTTTCCATTCTGAGTGGCAGGTTGC  585

seq1  AAATAGAAAGCATCCAATTCAGGTCCTGGCTTCATGAGTCCTTTTTGGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAAGCATCCAATTCAGGTCCTGGCTTCATGAGTCCTTTTTGGTT  635

seq1  TTGTTTTGAGGAAGTTTAAAATTCCCCAAAGATTCTGGTAAGCTGTCTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGAGGAAGTTTAAAATTCCCCAAAGATTCTGGTAAGCTGTCTGT  685

seq1  GACCTTACTCTGAATGTGACTTGAACAAATTCTTGCATTTTTTTTTCATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTACTCTGAATGTGACTTGAACAAATTCTTGCATTTTTTTTTCATT  735

seq1  CCCTCTTTTCTCAAAGCAACTATGTTGTTGTCAACATAGCCATGCTCAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTTTCTCAAAGCAACTATGTTGTTGTCAACATAGCCATGCTCAAG  785

seq1  ACTCTTGGCAGAAAAAAGTGCTGGGGCCTCTTGGGGTAGTTGTGGGGGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGGCAGAAAAAAGTGCTGGGGCCTCTTGGGGTAGTTGTGGGGGAA  835

seq1  GGAATATGCAAATTATGAGCGGGGAAACACTCAGGCAGGTGCTTAAGAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATGCAAATTATGAGCGGGGAAACACTCAGGCAGGTGCTTAAGAAT  885

seq1  AGAGACAAAGTTCTAGTTATCTTTCTATTGTGTCCCCCAAGCTGTGCATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAAAGTTCTAGTTATCTTTCTATTGTGTCCCCCAAGCTGTGCATT  935

seq1  GCTACGAAGCCAGCATCCGTTACACTCGTGTCCATATGACTCCACCACTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACGAAGCCAGCATCCGTTACACTCGTGTCCATATGACTCCACCACTC  985

seq1  ACTTCATCTTTCCTCAGGACACAAATTCATACAAACATCACTGCATAACT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATCTTTCCTCAGGACACAAATTCATACAAACATCACTGCATAACT  1035

seq1  AAGACACAATTCTAGTGATGACATGTATGTTTCAAGCTCATTTCCTTGCC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACAATTCTAGTGATGACATGTATGTTTCAAGCTCATTTCCTTGCC  1085

seq1  TGCAGTATCATGCATTCTCTCTCCTGAGAATTC  1132
      |||||||||||||||||||||||||||||||||
seq2  TGCAGTATCATGCATTCTCTCTCCTGAGAATTC  1118

seq1: chr11_63517986_63519221
seq2: B6Ng01-155H12.g_66_1280

seq1  GAATTCTTTATCAGTCTTGCCTCCAGTAAACAGAGACTGAAGAGTCCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATCAGTCTTGCCTCCAGTAAACAGAGACTGAAGAGTCCCAT  50

seq1  CACTTCAAGCAAAGCTCATAGGGGAAAGGGTTCATAAGGATTCTTCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAAGCAAAGCTCATAGGGGAAAGGGTTCATAAGGATTCTTCCTGC  100

seq1  ATCCTGGAATTACAGAAGAAGACGAAATTAAAAACATCTTCACTCACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGAATTACAGAAGAAGACGAAATTAAAAACATCTTCACTCACATT  150

seq1  TAGGGAGTCCTGGGCTGAGTAGTGGGTACCAGGTAGCATACACAAGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGTCCTGGGCTGAGTAGTGGGTACCAGGTAGCATACACAAGTTCT  200

seq1  TTCAAAGCTGGGATGCAAGTCTGCTTAAAGAACAGAATGCAGACCTGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGCTGGGATGCAAGTCTGCTTAAAGAACAGAATGCAGACCTGATT  250

seq1  TCAGACACAAAGGAGGCTGGCATCTGGCTTCTGACCACTCAAAACATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACACAAAGGAGGCTGGCATCTGGCTTCTGACCACTCAAAACATTCT  300

seq1  TGAGGCAAATACTGCAGTTTAGTTCCAGAGATATGTGGGCCTTGGAGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAAATACTGCAGTTTAGTTCCAGAGATATGTGGGCCTTGGAGCTC  350

seq1  CTAGGTAAAGGAGAAGAGCAATGTGGCTGGGGCCATGATTTTGGAAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTAAAGGAGAAGAGCAATGTGGCTGGGGCCATGATTTTGGAAGACA  400

seq1  GGGCTAACCAGAAATAGAAAGAAGAATTGCAGGGTGTATTTTCAAGGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAACCAGAAATAGAAAGAAGAATTGCAGGGTGTATTTTCAAGGACC  450

seq1  GAGTGGGAATCATTGTTTAGTGCTACTTAACGTCTAAAACTGAAAGCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGAATCATTGTTTAGTGCTACTTAACGTCTAAAACTGAAAGCTCA  500

seq1  CCTCCAGAGGGCTTAGCTGACCAAGCCGTCTTAACTCAGTCCACTTCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGAGGGCTTAGCTGACCAAGCCGTCTTAACTCAGTCCACTTCCCC  550

seq1  AAACGTATAAGTCGTCTTGATGCACTTCAGAATCGGACTGCTTTTGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTATAAGTCGTCTTGATGCACTTCAGAATCGGACTGCTTTTGCCTG  600

seq1  ATATTAAAACAGTTCACCAACGAGCCTTCTGTCAATCAAATGTCAGCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAAACAGTTCACCAACGAGCCTTCTGTCAATCAAATGTCAGCTTG  650

seq1  ACAGCCACCGCTTTTTGTTTAACTGAATGGAGCTGCTAAGCAGTCAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCACCGCTTTTTGTTTAACTGAATGGAGCTGCTAAGCAGTCAGAAG  700

seq1  GATTGGATCACAGAGAGGACAAAAGGCTTGAAGGCTGAAGTTGAGGTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGATCACAGAGAGGACAAAAGGCTTGAAGGCTGAAGTTGAGGTTAC  750

seq1  AATCTGCTTCCACTCTGAATTCCCTGCAGTCCGCCCTGTACATCTTAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCTTCCACTCTGAATTCCCTGCAGTCCGCCCTGTACATCTTAGTG  800

seq1  AAAATGTTTGCATTCGGTCATAAACTGGGCATATCATCCACAAGCTGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTTGCATTCGGTCATAAACTGGGCATATCATCCACAAGCTGAGA  850

seq1  GCCCTGGAGGGCTTTCCCATACCCTTAAAATCTGAACCCCCCGCCCCCCG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGAGGGCTTTCCCATACCCTTAAAATCTGAACCCCCCGCCCCCCG  900

seq1  CCTTCCAGCCTCCTTCTGCTGTTTGAATGTGGACTGTCTTCTCCCCAGCT  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCTTCCAGCCTCCTTCTGCTGTTTGAATGTGGACTGTCTTCT-CCCAGCT  949

seq1  GCTTCCACTTTCCCTGGAATGTTCTTTTCTGGGATATTTGAATGGCCAGT  1000
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  GCTTCCACTTTCCCTGG-ATGTTCTTTTCTGGGATATTTG-ATGGCCAGT  997

seq1  TCTTTCTCCTTTCTCGAGTCTCAGTTCAGATGTCACCTTCTCAAAGAGTA  1050
      || |||||||||||||||||||||||||||||||| |||||| |||||| 
seq2  TC-TTCTCCTTTCTCGAGTCTCAGTTCAGATGTCA-CTTCTC-AAGAGT-  1043

seq1  AGTTCTTGAAGTAATACTGCGCAC-AGTTTGCTTCTGTCCTCTTCTCTTA  1099
      |||||||||||||||||||||||| |||||||||||||||||||| || |
seq2  AGTTCTTGAAGTAATACTGCGCACAAGTTTGCTTCTGTCCTCTTC-CTAA  1092

seq1  ATTGGATCCTATCCTATCTCTATCTGGCATTATAATTTATCCACTTGTTT  1149
      ||  ||| |||| |||||||||||  ||||||||| |||||||| |||||
seq2  AT--GAT-CTAT-CTATCTCTATCCTGCATTATAA-TTATCCAC-TGTTT  1136

seq1  ATCTATGTATTTATCTGTTGCCTTACTAGAATGCAAGTTTGCTAAGGCAG  1199
      | | ||||| |||||||| ||  ||| |||| |||    ||  |||||||
seq2  A-CCATGTAATTATCTGTGGC--TAC-AGAAAGCA---GTGGCAAGGCAG  1179

seq1  GACTTTTGCCGCCCTGCTTTCTTAATCT-ACAACAAAA  1236
      || ||||  |||||||||||||| ||||  ||||||||
seq2  GAATTTT--CGCCCTGCTTTCTTTATCTCTCAACAAAA  1215