BAC Information

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BAC

Clone NameB6Ng01-155O23
Chromosome11 (Build37)
Map Location 13,634,621 - 13,795,399
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC627244
Downstream geneLOC432535, 1700046C09Rik, 1700054H16Rik, LOC100042542, LOC100041673
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155O23.bB6Ng01-155O23.g
ACCDH950574DH950575
length1,087992
definitionDH950574|Mus musculus domesticus DNA, BAC clone: B6Ng01-155O23, 5' end.DH950575|Mus musculus domesticus DNA, BAC clone: B6Ng01-155O23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,794,298 - 13,795,399)(13,634,621 - 13,635,291)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatatttgatattagtccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggcctt
tttgtcttattgacggggtcttttgccttgcagaagctttgcagtttcat
gaggtcccatttgtcaattctcgatcttacagcacaagccattgccgttc
tattcaggtattttccccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtcactgggtttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagctaggaatggattgattcgca
ttcttctacatgataacaaccagttgtggcaggtgttcttataagcagta
tttattcatctacttattaaataccacataaatgtggcaaatatggtagt
tttattttatttatttactgtcaatctatgaggtacctctgattattatt
gctaacatatgcaaaatctgggtacatacctacctttctctgttgctttg
ccatttgcgacttttgacagtttgtacatttatctccatttaaagagaca
tgtgaatgttttgcaaactccttctgatgtcctttgttttcctggagtga
tgtcctatatgtgtgttctcattaataggtatgaatatttccccatgctg
tgtactgataagaaaatccttgaatcacagattttataacttcaatttgt
ttgaaaatactgcttataccaaagtgagtaggtcaacttccatttcaaag
aaaatctgagctacagcttagttgccagcatttcagaaaatagatttcat
agtgctaacttttgataggtttagttcatgtgagaatatttaggttttat
ataatttgcttatgctgttggttttttgaaagtaaattttttaatctgta
attttctttcttcctgtttacattgtttacttatgctttgttacccaaag
aatgcaaattatacgaacaacaaacttagctattata
gaattcatcttggtagatttttttttttgaggaatatgaaatgtccttcc
ttatcttttttgataacttttggttgaaatttgattttattcagtattag
aatggttactgaagtttgtttctttggaccatttgcttggaaacttgttt
tccagtcctttcctctgaggtagtgtctttctttgttactgaggtacttt
tcctgtattcagcaaaatgctgggtcctatttaagtaaccaggctgttag
tctttgtctttgaattgtggaattgagtccattgatgttaacagatatta
atgtaaacttattgctgcttcttgttatttttcttgttaaaggtagaatt
atgtttgtgtggctatcttctttgggtgtgttgaaagaagattactttct
tgctttcccagagtatagtttccctccttgtgttggagttttccatttat
tatcctttgtaggcctgaatctgtggaaagatattgtgtaaatttggaat
ttcttgatttctccatctatggtaattgagaattttgctgggtataggag
cctgggttggcctttttgttctcttagggtctgtatgacatctgcccagg
atattctgtgattgattgtctctggtgagaagtctggtataactctgata
ggtcttcatttacatgttacttgacctttttccccttactgctattaata
ttctttgtttctttgtgcttttgatgtctttgtttttatgtgagaggagt
ttcttttctggtcaggtctgtaggcttcttgtatggttttgagcaactct
ttttcactactctctgctttgtattgtgctatactatagtattctcagcg
atatttcaaaggacaaggaagtttcatatcagaaatttcaagaagttatc
atctatgacacatttactgaaatgttttccatttagtttctaaccaatca
ggaatttctgggttttttgttggttgttgttgttaatatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_13794298_13795399
seq2: B6Ng01-155O23.b_47_1133 (reverse)

seq1  TATAATAGCTTATGTTGTTGTCTGTATATATTTTGCCATTCTTTTGTGTA  50
      |||||||||| |  |||||||  ||||| ||||   ||||| |||| |||
seq2  TATAATAGCTAAGTTTGTTGTTCGTATA-ATTT--GCATTC-TTTGGGTA  46

seq1  AACACAAAGCATAAAGTAAAACAATGTAAACAGGAAAGAAAGAAAATTTT  100
         ||||||||| |||| |||||||||||||||| |||||||||||  ||
seq2  ---ACAAAGCAT-AAGT-AAACAATGTAAACAGG-AAGAAAGAAAA--TT  88

seq1  ACAGATTAAAAAAATTTAACTTTCAAAAAAACCAACAGCATAAGCAAATT  150
      |||||||||||||  || |||||| |||||||||||||||||||||||||
seq2  ACAGATTAAAAAA--TTTACTTTC-AAAAAACCAACAGCATAAGCAAATT  135

seq1  ATATAAAACCTAAATATTCTTCACATGAACTAAACCTATCAAAAGTTAGC  200
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATATAAAACCTAAATATTC-TCACATGAACTAAACCTATCAAAAGTTAGC  184

seq1  ACTATGAAATCTA-TTTCTGAAATGCTGGCAACTAAGCTGTAGCTCAGAT  249
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACTATGAAATCTATTTTCTGAAATGCTGGCAACTAAGCTGTAGCTCAGAT  234

seq1  TTTCTTTGAAATGGAAGTTGACCTACTCACTTTGGTATAAGCAGTATTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGAAATGGAAGTTGACCTACTCACTTTGGTATAAGCAGTATTTT  284

seq1  CAAACAAATTGAAGTTATAAAATCTGTGATTCAAGGATTTTCTTATCAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAATTGAAGTTATAAAATCTGTGATTCAAGGATTTTCTTATCAGT  334

seq1  ACACAGCATGGGGAAATATTCATACCTATTAATGAGAACACACATATAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCATGGGGAAATATTCATACCTATTAATGAGAACACACATATAGG  384

seq1  ACATCACTCCAGGAAAACAAAGGACATCAGAAGGAGTTTGCAAAACATTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACTCCAGGAAAACAAAGGACATCAGAAGGAGTTTGCAAAACATTC  434

seq1  ACATGTCTCTTTAAATGGAGATAAATGTACAAACTGTCAAAAGTCGCAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCTCTTTAAATGGAGATAAATGTACAAACTGTCAAAAGTCGCAAA  484

seq1  TGGCAAAGCAACAGAGAAAGGTAGGTATGTACCCAGATTTTGCATATGTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAGCAACAGAGAAAGGTAGGTATGTACCCAGATTTTGCATATGTT  534

seq1  AGCAATAATAATCAGAGGTACCTCATAGATTGACAGTAAATAAATAAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATAATAATCAGAGGTACCTCATAGATTGACAGTAAATAAATAAAAT  584

seq1  AAAACTACCATATTTGCCACATTTATGTGGTATTTAATAAGTAGATGAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTACCATATTTGCCACATTTATGTGGTATTTAATAAGTAGATGAAT  634

seq1  AAATACTGCTTATAAGAACACCTGCCACAACTGGTTGTTATCATGTAGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTGCTTATAAGAACACCTGCCACAACTGGTTGTTATCATGTAGAA  684

seq1  GAATGCGAATCAATCCATTCCTAGCTCCTTGTACTAAGGTCAAATCTAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCGAATCAATCCATTCCTAGCTCCTTGTACTAAGGTCAAATCTAAG  734

seq1  TGGATCAAGGAACTTCACATAAACCCAGTGACACTGAAACTTATAGAGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCAAGGAACTTCACATAAACCCAGTGACACTGAAACTTATAGAGGA  784

seq1  GAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGGAAAATACCTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGGAAAATACCTGA  834

seq1  ATAGAACGGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACGGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGAC  884

seq1  CTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACCCCGTCAATAAGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACCCCGTCAATAAGAC  934

seq1  AAAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAG  984

seq1  ATAGGGACTAATATCAAATATATATAAAGAACTCAAGAAGGTGGACTCCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGACTAATATCAAATATATATAAAGAACTCAAGAAGGTGGACTCCA  1034

seq1  GAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAA  1084

seq1  TTC  1102
      |||
seq2  TTC  1087

seq1: chr11_13634621_13635291
seq2: B6Ng01-155O23.g_375_1037

seq1  TTATTGCTGCTTCTTGTTATTTTTCTTGTTAAAGGTAGAATTATGTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCTGCTTCTTGTTATTTTTCTTGTTAAAGGTAGAATTATGTTTGT  50

seq1  GTGGCTATCTTCTTTGGGTGTGTTGAAAGAAGATTACTTTCTTGCTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTATCTTCTTTGGGTGTGTTGAAAGAAGATTACTTTCTTGCTTTCC  100

seq1  CAGAGTATAGTTTCCCTCCTTGTGTTGGAGTTTTCCATTTATTATCCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTATAGTTTCCCTCCTTGTGTTGGAGTTTTCCATTTATTATCCTTT  150

seq1  GTAGGCCTGAATCTGTGGAAAGATATTGTGTAAATTTGGAATTTCTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCCTGAATCTGTGGAAAGATATTGTGTAAATTTGGAATTTCTTGAT  200

seq1  TTCTCCATCTATGGTAATTGAGAATTTTGCTGGGTATAGGAGCCTGGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCATCTATGGTAATTGAGAATTTTGCTGGGTATAGGAGCCTGGGTT  250

seq1  GGCCTTTTTGTTCTCTTAGGGTCTGTATGACATCTGCCCAGGATATTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTTTGTTCTCTTAGGGTCTGTATGACATCTGCCCAGGATATTCTG  300

seq1  TGATTGATTGTCTCTGGTGAGAAGTCTGGTATAACTCTGATAGGTCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGATTGTCTCTGGTGAGAAGTCTGGTATAACTCTGATAGGTCTTCA  350

seq1  TTTACATGTTACTTGACCTTTTTCCCCTTACTGCTATTAATATTCTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATGTTACTTGACCTTTTTCCCCTTACTGCTATTAATATTCTTTGT  400

seq1  TTCTTTGTGCTTTTGATGTCTTTGTTTTTATGTGAGAGGAGTTTCTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTGCTTTTGATGTCTTTGTTTTTATGTGAGAGGAGTTTCTTTTC  450

seq1  TGGTCAGGTCTGTAGGCTTCTTGTATGGTTTTGAGCAACTCTTTTTCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAGGTCTGTAGGCTTCTTGTATGGTTTTGAGCAACTCTTTTTCACT  500

seq1  ACTCTCTGCTTTGTATTGTGCTATACTATAGTATTCTCAGCGATATTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACTCTCTGCTTTGTATTGTGCTATACTATAGTATTCTCAGCGATATTTC-  549

seq1  AAAGGACAAAGGAAGTTTCATATCAGGAAAATTTCAAGAAGTTATCATCT  600
      ||||||| ||||||||||||||||||  ||||||||||||||||||||||
seq2  AAAGGAC-AAGGAAGTTTCATATCAG--AAATTTCAAGAAGTTATCATCT  596

seq1  ATGACAACATTTACTGAAATGTTTTCCCATTTAGTTTTCTAACCAATCAA  650
      ||||| ||||||||||||||||||| |||||||| ||||||||||||| |
seq2  ATGAC-ACATTTACTGAAATGTTTT-CCATTTAG-TTTCTAACCAATC-A  642

seq1  GGAATTTCTGGGTTTTTTGTT  671
      |||||||||||||||||||||
seq2  GGAATTTCTGGGTTTTTTGTT  663