BAC Information

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BAC

Clone NameB6Ng01-156G14
Chromosome11 (Build37)
Map Location 45,153,495 - 45,211,218
singlet/doubletdoublet
Overlap genenone
Upstream geneIl12b, Ublcp1, 3732413I11Rik, Ebf1, LOC382510
Downstream geneLOC633082, Clint1, Lsm11, Thg1l, Sox30, LOC667037, LOC100039624, Adam19, 9530066K23Rik, Cyfip2, C030019I05Rik, LOC100038833, LOC100039577, Itk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156G14.bB6Ng01-156G14.g
ACCDH950922DH950923
length1,0771,149
definitionDH950922|Mus musculus domesticus DNA, BAC clone: B6Ng01-156G14, 5' end.DH950923|Mus musculus domesticus DNA, BAC clone: B6Ng01-156G14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,210,126 - 45,211,218)(45,153,495 - 45,154,666)
sequence
gaattccatctctctgagactctgattcctcatctataacaccgaaatgg
tagtcatgacagatgcagcaatttgttgctgtgtgaatttatagagataa
tatgtctgaatagctttgcccagggcgttggactttgtcagccttgataa
acattggccattattactttcgcgggtcctctgtctgcattattattgag
aagggaattggatcacgagaaagcttaggccacgtgtgaaagggcaaata
cggcaactttcagcttccagttgcttcccttagaatactcatatttttca
aattatactttgtctttcttgcatcttttagtaatttttttatttacttg
cagtaatgaagttcatacagcttgattaagtggccaaagaagtcttgact
aattttatatgttttaaaaaagggaaatatttgatcttttataattttct
ttagccagtcatttattacacagaaatttgattgaaggcctattatatgc
caatattttcctgggtacatggagcacacaaaacatagatccatgcccca
aggctcagctaaacctgcattaacactatagtaaattatagcatgtctta
gaatggagaggaggatagaatgggagggaacttgagaggccagagacttg
gttgtattttattgtaccctggttatgaactctgagctcaatgaaataga
tttagtgtctggaaaaagagaaccctttcccattctcttccagttccagt
gggctagctctcactggccagctttcagtgttccagttgcagctgggcct
tgctggtctcctcaccaattgctgcctactaaacaggaactgctacggat
cccagcagatctgttctttttgacagatcataccatatctacattactct
tagcataaccaagccaggggcagaagaaagtgccattccagaggtgagaa
attcctctactccttgtggattttctgggatacagcaaatgaggacttca
tctgggtgtgggtgagttacttattttctccccactgctgagcattcagc
ttatatccaggtgaactgcagaacata
gaattcatctcccaaatatcccaacaggttaaccaggtctggggtgagga
aatcacagctcatgcctttgaaggttttttttggattgagtctaaaagat
tctgtgtttcagagaatcagaattttctctcgaggttcattctgtacagc
ctaggaagccaggtgatgcttccctctcatgctaatctcctcctgatgag
acaaagacaagaataaaattaaatacaagcatcagctcaaagaacataac
tgtttgtatgttcctagagcaatgctatgtccaggcacttcctgtgagct
aggtgtcatgctctctgctggacatacaacatctcatttaattctctcac
tgctgaaaggtgtgcccttatttaccccaaatggagacatgggggtgaca
caaacagtggtttcttttttccaggctttctgtttgtaaaggacagaccc
ttgggttcatccggctcctcctgcctccttgatgtccttaactaaatccc
cagagaatgacaagttccctttgtagaacaagcatcctgtgaagggttga
tgctggatttttcagtaagtgttccctttgggatctataatcatccagag
agaaaccttttgatcctgctatgattgtcatttctttcccaccgcactgc
ccaggcaagaagcaagctattgttgtgccccccactgtcctcacacaatt
gaagcagctcctctccgtgacctcagttccatattacttttgttttgttt
tattggttacattctctttcccaacacttctaagtattcctttatgtcct
aaaaacttaggtcactgcccattcacttgctccagatagcccaccctttc
ctgcaagtccctggcaagagatcagaaagctatacattttagttatgttt
ctgttgctgggataaaacaccaccaccaaaagcaacttaagaagaagggc
ttattttatcctatgggtccgaggatagagtccatgagagaggtagcaag
gcagtggagcagaaacaaagaaatgatttgtatgccagaaccaagagaca
tacaggagtggagtaagctatacacccctcaaagtctataccctgcccat
ccttcttctgctgcccacccactaagtgcataccctcctcaggcagtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_45210126_45211218
seq2: B6Ng01-156G14.b_47_1123 (reverse)

seq1  TATGTTCTGGCAGTTCACCTGGGAATATAAGCTGAAATTGCTACAGCAGT  50
      |||||||| |||||||||||||  ||||||||||||  |||| |||||||
seq2  TATGTTCT-GCAGTTCACCTGG--ATATAAGCTGAA--TGCT-CAGCAGT  44

seq1  GGGGAGAAAAATATAGTAACCTCCACCCAACACCCAGATGAAGTTCCCTC  100
      |||||| |||||| ||||||   ||||| |||||||||||||||  ||||
seq2  GGGGAG-AAAATA-AGTAAC--TCACCC-ACACCCAGATGAAGT--CCTC  87

seq1  ATTTGCTTGTAATCCCAGAAAATCCACAAGGAGTAGAGGAATTTCTCACC  150
      |||||| ||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTTGC-TGT-ATCCCAGAAAATCCACAAGGAGTAGAGGAATTTCTCACC  135

seq1  TCTGGAATGGCACTTTCTTCTGCCCCTGGCTTGGTTATGGCTAAGAGTAA  200
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCTGGAATGGCACTTTCTTCTGCCCCTGGCTTGGTTAT-GCTAAGAGTAA  184

seq1  TGTAGATATGGTATGATCTGTCAAAAAGAACAGATCTGCTGGGATCCGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATATGGTATGATCTGTCAAAAAGAACAGATCTGCTGGGATCCGTA  234

seq1  GCAGTTCCTGTTTAGTAGGCAGCAATTGGTGAGGAGACCAGCAAGGCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTCCTGTTTAGTAGGCAGCAATTGGTGAGGAGACCAGCAAGGCCCA  284

seq1  GCTGCAACTGGAACACTGAAAGCTGGCCAGTGAGAGCTAGCCCACTGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAACTGGAACACTGAAAGCTGGCCAGTGAGAGCTAGCCCACTGGAA  334

seq1  CTGGAAGAGAATGGGAAAGGGTTCTCTTTTTCCAGACACTAAATCTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGAGAATGGGAAAGGGTTCTCTTTTTCCAGACACTAAATCTATTT  384

seq1  CATTGAGCTCAGAGTTCATAACCAGGGTACAATAAAATACAACCAAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGCTCAGAGTTCATAACCAGGGTACAATAAAATACAACCAAGTCT  434

seq1  CTGGCCTCTCAAGTTCCCTCCCATTCTATCCTCCTCTCCATTCTAAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCTCAAGTTCCCTCCCATTCTATCCTCCTCTCCATTCTAAGACA  484

seq1  TGCTATAATTTACTATAGTGTTAATGCAGGTTTAGCTGAGCCTTGGGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATAATTTACTATAGTGTTAATGCAGGTTTAGCTGAGCCTTGGGGCA  534

seq1  TGGATCTATGTTTTGTGTGCTCCATGTACCCAGGAAAATATTGGCATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTATGTTTTGTGTGCTCCATGTACCCAGGAAAATATTGGCATATA  584

seq1  ATAGGCCTTCAATCAAATTTCTGTGTAATAAATGACTGGCTAAAGAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCCTTCAATCAAATTTCTGTGTAATAAATGACTGGCTAAAGAAAAT  634

seq1  TATAAAAGATCAAATATTTCCCTTTTTTAAAACATATAAAATTAGTCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGATCAAATATTTCCCTTTTTTAAAACATATAAAATTAGTCAAG  684

seq1  ACTTCTTTGGCCACTTAATCAAGCTGTATGAACTTCATTACTGCAAGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTTGGCCACTTAATCAAGCTGTATGAACTTCATTACTGCAAGTAA  734

seq1  ATAAAAAAATTACTAAAAGATGCAAGAAAGACAAAGTATAATTTGAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAATTACTAAAAGATGCAAGAAAGACAAAGTATAATTTGAAAAA  784

seq1  TATGAGTATTCTAAGGGAAGCAACTGGAAGCTGAAAGTTGCCGTATTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTATTCTAAGGGAAGCAACTGGAAGCTGAAAGTTGCCGTATTTGC  834

seq1  CCTTTCACACGTGGCCTAAGCTTTCTCGTGATCCAATTCCCTTCTCAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCACACGTGGCCTAAGCTTTCTCGTGATCCAATTCCCTTCTCAATA  884

seq1  ATAATGCAGACAGAGGACCCGCGAAAGTAATAATGGCCAATGTTTATCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCAGACAGAGGACCCGCGAAAGTAATAATGGCCAATGTTTATCAA  934

seq1  GGCTGACAAAGTCCAACGCCCTGGGCAAAGCTATTCAGACATATTATCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGACAAAGTCCAACGCCCTGGGCAAAGCTATTCAGACATATTATCTC  984

seq1  TATAAATTCACACAGCAACAAATTGCTGCATCTGTCATGACTACCATTTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTCACACAGCAACAAATTGCTGCATCTGTCATGACTACCATTTC  1034

seq1  GGTGTTATAGATGAGGAATCAGAGTCTCAGAGAGATGGAATTC  1093
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTATAGATGAGGAATCAGAGTCTCAGAGAGATGGAATTC  1077

seq1: chr11_45153495_45154666
seq2: B6Ng01-156G14.g_66_1214

seq1  GAATTCATCTCCCAAATATCCCAACAGGTTAACCAGGTCTGGGGTGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTCCCAAATATCCCAACAGGTTAACCAGGTCTGGGGTGAGGA  50

seq1  AATCACAGCTCATGCCTTTGAAGGTTTTTTTTGGATTGAGTCTAAAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAGCTCATGCCTTTGAAGGTTTTTTTTGGATTGAGTCTAAAAGAT  100

seq1  TCTGTGTTTCAGAGAATCAGAATTTTCTCTCGAGGTTCATTCTGTACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTTTCAGAGAATCAGAATTTTCTCTCGAGGTTCATTCTGTACAGC  150

seq1  CTAGGAAGCCAGGTGATGCTTCCCTCTCATGCTAATCTCCTCCTGATGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAAGCCAGGTGATGCTTCCCTCTCATGCTAATCTCCTCCTGATGAG  200

seq1  ACAAAGACAAGAATAAAATTAAATACAAGCATCAGCTCAAAGAACATAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGACAAGAATAAAATTAAATACAAGCATCAGCTCAAAGAACATAAC  250

seq1  TGTTTGTATGTTCCTAGAGCAATGCTATGTCCAGGCACTTCCTGTGAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTATGTTCCTAGAGCAATGCTATGTCCAGGCACTTCCTGTGAGCT  300

seq1  AGGTGTCATGCTCTCTGCTGGACATACAACATCTCATTTAATTCTCTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCATGCTCTCTGCTGGACATACAACATCTCATTTAATTCTCTCAC  350

seq1  TGCTGAAAGGTGTGCCCTTATTTACCCCAAATGGAGACATGGGGGTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAAGGTGTGCCCTTATTTACCCCAAATGGAGACATGGGGGTGACA  400

seq1  CAAACAGTGGTTTCTTTTTTCCAGGCTTTCTGTTTGTAAAGGACAGACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGTGGTTTCTTTTTTCCAGGCTTTCTGTTTGTAAAGGACAGACCC  450

seq1  TTGGGTTCATCCGGCTCCTCCTGCCTCCTTGATGTCCTTAACTAAATCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTCATCCGGCTCCTCCTGCCTCCTTGATGTCCTTAACTAAATCCC  500

seq1  CAGAGAATGACAAGTTCCCTTTGTAGAACAAGCATCCTGTGAAGGGTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAATGACAAGTTCCCTTTGTAGAACAAGCATCCTGTGAAGGGTTGA  550

seq1  TGCTGGATTTTTCAGTAAGTGTTCCCTTTGGGATCTATAATCATCCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGATTTTTCAGTAAGTGTTCCCTTTGGGATCTATAATCATCCAGAG  600

seq1  AGAAACCTTTTGATCCTGCTATGATTGTCATTTCTTTCCCACCGCACTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCTTTTGATCCTGCTATGATTGTCATTTCTTTCCCACCGCACTGC  650

seq1  CCAGGCAAGAAGCAAGCTATTGTTGTGCCCCCCACTGTCCTCACACAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAAGAAGCAAGCTATTGTTGTGCCCCCCACTGTCCTCACACAATT  700

seq1  GAAGCAGCTCCTCTCCGTGACCTCAGTTCCATATTACTTTTGTTTTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGCTCCTCTCCGTGACCTCAGTTCCATATTACTTTTGTTTTGTTT  750

seq1  TATTGGTTACATTCTCTTTCCCAACACTTCTAAGTATTCCTTTATGTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTTACATTCTCTTTCCCAACACTTCTAAGTATTCCTTTATGTCCT  800

seq1  AAAAACTTAGGTCACTGCCCATTCACTTGCTCCAGATAGCCCACCCTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTTAGGTCACTGCCCATTCACTTGCTCCAGATAGCCCACCCTTTC  850

seq1  CTGCAAGTCCCTGGCAAGAGATCAGAAAGCTATACATTTTAGTTATGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGTCCCTGGCAAGAGATCAGAAAGCTATACATTTTAGTTATGTTT  900

seq1  CTGTTGCTGGGATAAAACACCACCACCAAAAGCAACTTAAAGAAGAAAGG  950
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  CTGTTGCTGGGATAAAACACCACCACCAAAAGCAACTT-AAGAAG-AAGG  948

seq1  GCTTATTTTATCCTATGGGTCCGGAGGGATAGAGTCCATGAGAGAGGGAA  1000
      |||||||||||||||||||||||   ||||||||||||||||||||| | 
seq2  GCTTATTTTATCCTATGGGTCCG--AGGATAGAGTCCATGAGAGAGGTA-  995

seq1  GGCAGGGCAGTGGAAGCAGGAAACAAAGAAACATTGATTTGTATGCCAGA  1050
       ||| |||||||| |||| ||||||||||||   ||||||||||||||||
seq2  -GCAAGGCAGTGG-AGCA-GAAACAAAGAAA---TGATTTGTATGCCAGA  1039

seq1  AACAGAGAGACATACAGGAAGTGGAGTCAGGCTATTACA-CCCTCAAAGT  1099
      | || ||||||||||||| |||||||| | |||| |||| ||||||||||
seq2  ACCA-AGAGACATACAGG-AGTGGAGT-AAGCTA-TACACCCCTCAAAGT  1085

seq1  CTATACCCTGCACCAATACTTCTTCTTGCTGGTCTCCACCCACTAAAGGT  1149
      ||||||||||  || || ||||||| |||||    |||||||||||    
seq2  CTATACCCTG--CCCATCCTTCTTC-TGCTG---CCCACCCACTAA---G  1126

seq1  TGCATACCCTCCTCAAGCAGTGC  1172
      ||||||||||||||| |||||||
seq2  TGCATACCCTCCTCAGGCAGTGC  1149